Girardinichthys multiradiatus (darkedged splitfin): 124857230
Help
Entry
124857230 CDS
T08099
Symbol
smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124857230 (smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmu03021
]
124857230 (smarcc2)
03036 Chromosome and associated proteins [BR:
gmu03036
]
124857230 (smarcc2)
Transcription machinery [BR:
gmu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124857230 (smarcc2)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124857230 (smarcc2)
PBAF complex
124857230 (smarcc2)
GBAF(ncBAF) complex
124857230 (smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
BRCT_2
Motif
Other DBs
NCBI-GeneID:
124857230
NCBI-ProteinID:
XP_047204364
LinkDB
All DBs
Position
20:complement(29042808..29063005)
Genome browser
AA seq
1050 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLPMKCFVDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLTRPVIYLSPDIEPKLLSKLKDIIKRHQGSVTEDKTSSSHVVVP
IPTSLEEEEWVRPVMKRDKQVLLHWGYFPDSYDTWIPASEIEAAVEDPPSTEKPRKVHAK
WILDLDQYNEWMNEEDYEVGEGCPKRKRISAKTLTDEVTTPDERRDKKPGNAKKRKRSPS
PSPTPPPQESKKKNTKKGPTTPYTKSKRGQREEEQEELSKDLDEASPIPASEEGNTAKTN
NTKKDPESTPVKGGTEMDEQEDESMETTGKEEEEGSPSVKGEPVKSSDLHEDNVTEQTHH
IIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTS
TACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLVP
LQPKTSQTPATQPMISFPDKVKDKPTDLQNFGLRTDMYSKKTGSAKSKSGASSMRDWTEQ
ETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSSSTLGPLAYQPV
PFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVEEAAR
VSGRQDPMYGLEGSGIAGTGLEEGDRPDESSDESKSDSQSNEEKREAKESKDGAMEEEEK
QVENGKKEEERGREPEGEREADKTEPEMVDGENEKDAKEGIEEGQREGEMEGERKAKVER
DVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELET
IMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQHQQHSQAGGPHSNQAT
SAPAPQGPNASQPAPSTPAPQAAPSPAPPASSAPPPESQPPAGTHAPSPCPPGQTPAPHS
SSSTTPAHHEASAPHQGESLHPSAPVPAPQ
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcggcccgaatgtaaaatatttcgaagcgtctgacacc
gtttcccagtttgataatgtccgcgtctggttgggaaagaattataaaaagtacatccag
gctgagccccccactaacaaatctctgtccagcctggtggtccagctgctccagttccag
gaggaggtttttggcagacatgtcagcaatcctcccctcacaaagctgccgatgaaatgt
tttgtagacttcaagtcaggaggggctctctgccacattctggctgctgcctacaagttc
aagagtgaccaaggatggcgcaggtttgacttccagaatccgtcgaggatggaccgaaat
gtggagatgttcatgacgattgagaagtccttggtgcagaacaattgtctgactcgaccc
gtcatctacctgagccctgacatagaaccaaagctgctcagcaaactgaaagacatcatc
aaaagacatcagggctccgtgactgaagacaagacctccagctcccatgttgtggtgcct
attcctaccagtctggaggaagaggagtgggtgcgtcctgtgatgaagagagacaagcag
gttctgctgcactggggatatttcccggacagttacgacacctggatcccagccagtgag
attgaagctgcagtggaggatcctcccagcacagaaaagcccagaaaggttcatgcaaaa
tggattttagacctcgaccagtataacgagtggatgaatgaggaagactatgaggtggga
gaaggttgtcctaagaggaagaggatctctgccaagacactaacggatgaggtgaccaca
ccagatgagcgaagggacaagaaaccaggcaatgccaagaaaagaaagcgatcaccatca
ccttcgccaacacctccacctcaagagagcaagaagaaaaataccaaaaaagggccgacc
accccgtacaccaagtctaaacgaggtcagagggaggaggaacaggaggagctgtccaag
gacctggatgaagcctcacctattcctgcatctgaagaaggaaacacagcaaagacaaac
aacaccaagaaggacccagaatcaaccccagttaagggaggcactgaaatggatgaacaa
gaagatgagtccatggagacaacaggaaaggaagaggaggagggctctcccagtgtaaag
ggtgaaccagtgaagagctcagaccttcatgaggacaacgtgacggagcaaacccaccac
atcatcatcccgagttacgctgcctggttcgactacaacagcgttcatgccattgagcgg
agagccttgcctgagtttttcaatgggaagaacaaatctaaaacccctgagatttatcta
gcctacaggaacttcatgattgacacatatcggctgaaccctcaggagtacctgacctcc
actgcctgccgaagaaacctggcaggagacgtgtgtgccatcatgagagttcatgctttt
ctagagcagtggggactgatcaactaccaggtggactcagagagtcggcccacacccatg
ggaccgccgccgacctctcacttccacgtccttgcagacactccttcaagtctggtgccg
ctgcagcccaagacatcccagacccccgccacccagccaatgatttcattcccagataaa
gtgaaagataagcccacagatctgcaaaactttgggctgcggaccgacatgtacagcaag
aagactggatctgcaaagagcaagagtggagcaagctccatgagagactggacagagcaa
gaaacactacttctacttgaggggctggagatgtataaggatgactggaacaaggtgtct
gaacacgtgggcagccgtacacaagacgagtgcatcctgcacttcttgcggttgccaatt
gaagacccatacttggaggacagctcctccacactgggcccactggcctatcaaccagtt
cctttcagccaagcaggaaaccctgtcatgagcaccgtggccttcctggcttctgtagtt
gacccacgtgtggcctcagctgcagccaaatccgctcttgaggagttttcccgtatgaaa
gaggaggtccctgcagcgctcgtcgaggctcatgtgcggcgcgtcgaggaagcagcgaga
gtcagcggccgacaggatcccatgtacggcctggaggggagcggcatcgcaggcactggc
ctggaggagggagacaggcctgatgaaagcagtgatgaaagtaagagtgacagccagtcg
aacgaggagaaaagagaggccaaggagagcaaagatggagcgatggaggaggaagagaag
caggtggagaatgggaagaaagaggaagaaagaggaagagaacctgaaggcgagagggag
gcagataaaacagagcctgagatggttgatggcgagaacgagaaagatgcaaaagaagga
atagaggagggacaaagagaaggagagatggaaggggaaaggaaggctaaagtcgagcgt
gatgtgggagagggaaacctggcaactgctgctgcttccgctttagcagctgctgctgtc
aaagccaagcatttagctgcagtggaagagaggaaaatcaaatctttggtggctctgctg
gtggagacccagatgaagaagcttgagattaaactgcgacactttgaagaactggaaact
atcatggacagagagagggaggctctggagtaccaacggcagcagctgctggctgaccgc
cagtccttccacatggagcagctgaaatacgctgagatgagggcccgccagcagcacttt
cagcagatccagcaccagcagcacagccaggccggaggccctcactccaaccaggcaacc
tcagccccagcgccccaaggccccaacgcgagtcagccagctcccagcacaccagctcca
caggcggcccctagtcctgcaccaccagcttcttctgccccgcctcccgaatcccaacct
cctgcaggcactcacgctccatctccctgccccccgggccagaccccggcccctcactcc
agctccagcactacacctgcacaccacgaggccagcgctcctcaccaaggtgagtcactc
cacccgtcagctcctgttcctgctccgcagtga
DBGET
integrated database retrieval system
