Girardinichthys multiradiatus (darkedged splitfin): 124857262
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Entry
124857262 CDS
T08099
Name
(RefSeq) laminin subunit beta-3-like isoform X1
KO
K06244
laminin, beta 3
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04382
Cornified envelope formation
gmu04510
Focal adhesion
gmu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124857262
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124857262
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
124857262
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMB1
RhoGAP
HrpB7
CENP-Q
F5_F8_type_C
Crescentin
Laminin_II
Fib_alpha
COG5_N
DUF745
Motif
Other DBs
NCBI-GeneID:
124857262
NCBI-ProteinID:
XP_047204410
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All DBs
Position
20:46730873..46770695
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AA seq
1183 aa
AA seq
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MYILYSLIRSRLSLQQESNMRILLLLAAMTAISGTQNDCSLGACYPPSKDLLLGRSHQLR
ASSTCGLTGSEVYCTPYQQWRMKCCPCDSRNPNGQLAHTVQEILTTSGPDRWWQSSKGVN
PVTLQLDLNNLFQLDNLVLSFKGPRPSSLVIERTLDNGQTWQPALYLAKNCEEAFPGVQT
TTPLSLEQMYCHTLHPYENPYQEETIEFSPLRQYTFAPASNSQKIEDKSGFTGLRVTLTE
LGNVPHLPGRSLSKFFALKEMRVMGTCMCHGHADRCLPEEYSNLNSNIIQVNPVCDCKHN
TAGINCERCADFYNDLPWRSAEEENTHTCKRCECNNHSQRCHFDLAVYEASGRRSGGVCE
GCMHHTTGPKCDQCAPGYQPKPRSQMDRPDACMRCICSVEGALNGGQCEDSTGSCQCKAN
VEGPHCDRCKRGFYGLSLSNPVGCKKCSCSQVGSLSVLCDPVIGQCPCRPHFHGLTCDVC
SRGYWKAPQTELCVPCGCDPTWSTSDTCDQETGQCQCRPGFGGRTCTECADNTYGTPLSG
CRPCQCDVGGTLPGVCDRRTGVCLCRLGVTGTRCDSCSRGYCDSFPACKLCPNCFFTLDS
QRMNISLSIEQLFPRFPSLPGSASDLGSSWPRIWTLEATVGKIRDSISQPPNTVTQLDDA
LFQLNKLRDELEKIDNDLPPPVRDPGLEYELDKLQALLDSIHLIFKSKKDAIENYINPSN
SGAHDIIKNAYYESRDADKKVNSTENTAKEASDIREETKDIQNQVQPNNTRDLSKLKHNM
SSQPDLTPVAKQVCGSVRSEPCTPLQCVGDLLCPPEGPACKNVTKCVGALPLSKRANADV
IDVKDRLSKLSVKITEATEMLQNTQETTDQVRQLAKDLSSKTKKARDMLEEDFKETHNVV
KVLKDFLSDPSSNLIQVQGVSDWILNARLPISLSILKSKLEELKNVAANLPTTMNVLKEA
KPQLDTARKLLQEAQDTRFKALGAKSNVSGLLEGLESGNDSLSDLEEKMQDSMDLIESLN
NNLTQAKDLLRPAENALEDTGALMTPMKAKLDGLKEQLEDAQEKGPYALNTADKAEEETA
VAEADLKMLEVQLDHLKDKSDPGGTGETTPVADRLEKLQEKAGALANTTQKMTEALEGKT
DSLQKLQDEIFQKSATLEGLDAKLKNILTVLRNRAEELRTCQG
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgtatattctttattctcttatccgttccagactttctctgcagcaggaatccaatatg
aggatccttttacttctagctgcaatgacagccatatctggaacccagaatgactgctct
cttggagcgtgttatccacctagcaaggacctgcttctgggcaggtctcaccagctgcga
gcctcctccacttgtggccttactggctcagaggtctactgcaccccataccagcagtgg
aggatgaaatgctgcccatgtgactccaggaacccaaacggtcagctggcccacacagtc
caagagatcctcacaacctctggaccagacaggtggtggcagtccagcaaaggggtaaat
ccagtcactctgcagctggacctcaataacctgtttcagcttgacaacctggtgctcagc
ttcaagggtcctcgtcccagttccctggtcatagagagaactctagataatggtcagaca
tggcagcctgcactctacttggccaaaaactgtgaggaagcttttcctggggtccaaacc
actacccctctcagtctggagcaaatgtactgccacacactgcacccctatgaaaaccca
taccaagaggaaacaattgagttcagcccattgcgtcagtacacttttgctccagcttcc
aacagccagaaaattgaagataagtctggcttcacaggactgcgggtaacgctaactgag
ctgggcaatgtgccccatttaccgggcagatctctcagtaaattctttgccctgaaagaa
atgagagtgatgggcacttgcatgtgccacggacatgctgaccggtgcctgccagaggaa
tacagtaacctgaattccaatatcatacaggtaaatcctgtgtgtgactgcaagcataac
acagccggcataaactgtgagcgctgtgctgacttctacaatgatctaccttggagatcc
gcagaggaggagaacacacacacttgcaaacgctgtgagtgtaacaaccactcccagcgc
tgtcactttgacctggctgtgtatgaggccagtggacggaggagtggaggagtgtgtgag
ggttgcatgcaccacaccacagggccaaagtgtgaccagtgtgcaccaggctatcagcca
aaaccccgtagccaaatggatcgtcctgatgcatgcatgcgctgtatttgcagtgtggaa
ggagcactaaatggaggccaatgtgaagacagcacaggctcctgtcagtgcaaagctaat
gtggagggtccccactgtgaccgctgcaaaagaggtttctacggcctgagcttatccaac
cctgtgggctgtaaaaagtgttcctgttctcaagtaggctccctgtcagttttgtgtgat
cctgtgatcggccagtgtccctgtcgtccccacttccatggcctgacctgtgatgtgtgt
tcaagaggctactggaaagctccccaaacagaactctgtgtaccctgtggctgtgacccc
acctggtcaaccagtgacacctgtgaccaggagacaggtcagtgtcagtgcagaccaggc
tttggaggaagaacatgcactgagtgcgcagacaacacatatggaacccctctgtctggg
tgccggccttgtcagtgtgatgtaggcggaacccttccaggagtttgtgacagaaggact
ggagtgtgtttgtgccgattgggtgtcactgggactcgttgtgactcttgcagtcgaggg
tactgtgattctttccctgcctgtaaactttgtccaaactgtttctttaccctggactcc
caaagaatgaacattagcctttctatagagcaactttttcccagattcccttcgcttccc
ggaagtgctagtgatcttggaagctcttggccacgcatttggactcttgaggccaccgta
ggcaagatcagggactctatatctcaaccacccaacactgttacgcagcttgatgatgcc
ctattccagctcaacaaactgagggacgagttggaaaaaatcgataatgatcttcctcct
ccagtaagagatcctggtttggaatatgagctggataaactacaagctctgctggacagc
atccatttgatttttaaatccaaaaaagatgccatagagaactacatcaaccccagtaat
tcaggagcacacgatatcattaagaatgcgtattatgaatcgagagatgcagataaaaaa
gtaaattctactgaaaacacagcaaaggaggcaagtgacatccgggaggaaacaaaggac
attcagaatcaagtgcagccaaacaacaccagagacctgagcaagctaaagcacaacatg
tcctcccaaccagatctcactcctgtcgcaaaacaggtgtgcggcagtgttcgatcagag
ccctgcacccctctccagtgtgtgggagatttattgtgtccaccagagggcccagcctgt
aaaaatgtaacaaagtgtgtaggtgcgctgccgttaagcaaaagggctaatgctgatgtt
attgatgtgaaggaccgactgagcaagcttagtgtgaagatcacggaggctacagaaatg
cttcagaatacacaggaaacaacagaccaggtgagacaattagcaaaggacctgtctagt
aaaactaagaaggccagagatatgctggaggaggacttcaaagagacgcacaatgttgtt
aaagtgctcaaagactttctgtcagacccgtcctccaacctaatccaggtccagggggtg
agtgactggattctgaatgccaggctgcccatcagtctgtctatcctgaagtcaaagctg
gaagagcttaaaaacgtggctgcaaatctaccaaccacaatgaatgtgctgaaggaggcc
aagccacaactggacacagccaggaagctgcttcaggaggctcaggacaccaggttcaag
gcactgggagccaagagcaatgtgagtggactcctggaaggcttagaatcagggaatgac
tccctctctgacttggaagagaaaatgcaggacagcatggatctcattgaaagcctcaat
aataaccttacacaagccaaagacctgctaaggccagcagagaatgcactggaggataca
ggagcactgatgacaccaatgaaagccaaactggatgggttaaaagagcaactggaggat
gcacaagaaaagggtccttatgctctgaacactgccgacaaagctgaggaagagacagct
gtcgcagaagcagatctaaagatgttggaggtacagcttgatcatcttaaagacaaatcg
gaccctggaggtactggagagacaactcctgtggcagatagactggaaaagctacaggag
aaagctggagctctggctaacaccacacaaaagatgacagaggctcttgaaggaaaaaca
gactccctccaaaagctacaggatgagatctttcagaagtctgcaacgcttgaaggactt
gatgccaagctgaaaaacatcttgacagtacttcgaaatagagcagaagaactccgcacc
tgtcagggctaa
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