Girardinichthys multiradiatus (darkedged splitfin): 124857449
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Entry
124857449 CDS
T08099
Symbol
blm
Name
(RefSeq) Bloom syndrome protein homolog isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03440
Homologous recombination
gmu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124857449 (blm)
03460 Fanconi anemia pathway
124857449 (blm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmu03032
]
124857449 (blm)
03400 DNA repair and recombination proteins [BR:
gmu03400
]
124857449 (blm)
Enzymes [BR:
gmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
124857449 (blm)
DNA replication proteins [BR:
gmu03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
124857449 (blm)
DNA repair and recombination proteins [BR:
gmu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
124857449 (blm)
Bloom's syndrome complex (BTR)
124857449 (blm)
FA (Fanconi anemia) pathway
124857449 (blm)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
BLM_N
BDHCT
Helicase_C
RecQ_Zn_bind
HRDC
RQC
ResIII
Motif
Other DBs
NCBI-GeneID:
124857449
NCBI-ProteinID:
XP_047204668
LinkDB
All DBs
Position
2:complement(27344152..27363526)
Genome browser
AA seq
1411 aa
AA seq
DB search
MSSLPQNNLQEQLARHSNAAQSKLSLAKPKTGAFSFKKKSSSGTTKVEYQTKVNSPNVLA
NRNVNVPTSSLVTKSSLTFSNKLERTQKSKINSLFPPSSKCKSDFISPTGNPTSPCETPP
ADTGIKVIAAPSKTNNQTSCGGKGISSIRLDVSDLPMDDWDDFEDFETPVKAKNDSFSSD
KSARVIKRTSSSDEEFPEFTGKQSHGSVHLKPQLSKNSDQSCKETEESESSVSKTAVSLE
PSLVHEPSDDEDCIVKRTRRRCPPPHVTSVLSDSDEEVSPRSEPLKDKTDEKGKWIDPKV
IELNDNSEPEEDIDYIPPSPPPDETSYMPSTTETRTLSGSVQSRDEPFWSNSPATTLPKP
SSHLSSDKTKEQLFSIMESICSLVDSIPEHELIALSCGNDLLLKRAHRKRILACGADSLC
RMMQQPDSTVISDTSFKRTFSSCGASSLMSPSTCLRVNTKKPLQPQSSSVISVDYDSDCF
DIASVKPWQRMDSRAIYVENESICDSLSAHSSKNPPFNLSKKTGSGADESDLFFSTKNSE
DVQNKSKTSTSATAADLETDDFYVDDFDIDDLNDSDIPDYFDEPSSKSGQNLSAVFAAVK
EGGPNKSSWDKNPVTPVSAPKPQRIYSPEPNFKNPAHDRFRGFNFPHSPEMMKIFHKRFG
LHQFRFNQLEAINATLLGEDVFVLMPTGGGKSLCYQLPACVSPGVTIVISPLKSLIVDQI
QKLTTLDIPATSLSGDKSDSEAGRIYVQLSRKDPIIKLLYVTPEKVSASNRLISALQNLY
ERGLVARFVIDEAHCVSQWGHDFRPDYKKLHELRQKFPNIPMMALTATATPRVQKDILNQ
LNMSRPQVFTMSFNRTNLKYSVLPKKPKKVDEDCIGWIKKHYPRDSGIVYCLSRNDCDAL
AESLKRAGIQALSYHAGLSDGDREYVQSKWINQDGCQVICATIAFGMGIDKPDVRYVIHA
SLPKSMEGYYQESGRAGRDGEISHCILFYSYTDVHRIKRIISMDREGDRHTKQTHYNNLH
SMVHFCENVMECRRIQLLAYFGELKFNRNFCKDHPDVSCDNCAKPNQCKLRKVTDDVKKI
VRFVQENCEKVGARFAKTPQQNRLTLNMLVDIFIGAKSAKIQTGMFGMGAGYSRHNADRL
FKKLVLDNVLVEDLYITNNGQAVTYISAGPKAMNVLSGHMEVEFYETESASSIRKHKAAV
SKNVSQREEMVQNCLKELIDLCKQLGKAFGLHYYNIFSTATLKKISEKLSSDPEVLLQID
GVTEDKLEKYGAEVIKVLQKYSEWQLPVDEQTESVGDGWIDTRRSEDDSTESSTYFRNQT
AQGQKRKKGPFFNYSKKRKAYGNQSCSSKGRGYNYNKQSSSGSRGGSHSSGRGSRSTAGD
APGGKRPGILSAPTPQGNQRPFLKPTFSHMS
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtctgccacaaaataacctgcaagaacagttggcgagacacagcaacgctgct
caaagcaagctgtctctggctaaacctaaaacgggggctttctcattcaaaaagaaatct
tcatcaggtacaactaaagtggaataccagaccaaggtaaacagtccaaatgttttggca
aacaggaacgtgaatgtccctacgagcagtttggtgactaaatcttctttaacgttttca
aacaagcttgaaagaactcaaaaatccaaaatcaacagcctcttccctccaagttcaaaa
tgcaagtcagatttcatcagccccacaggtaaccccacctcaccatgtgagacacccccg
gcagatactggcattaaggtgattgccgctccttctaaaactaacaaccagacctcctgt
ggtgggaaaggaatcagctccataagactggatgtatctgatttaccgatggatgactgg
gatgattttgaagactttgaaacacctgttaaagcaaaaaatgactccttctcctcagat
aaatcagcaagggtcatcaagagaacgtcatcttctgatgaagaattcccagagtttaca
ggaaaacaaagccacggttctgtccacttaaaaccacagttgagcaagaacagcgaccaa
tcttgtaaggagacagaggaatcagaatccagtgtcagtaaaacagcagtctcactagaa
cctagtttagttcatgaaccttcagatgatgaagattgtattgttaaaaggaccagaagg
cgttgtcctcctccacatgtgacgtctgtgttgagtgatagcgatgaggaggtcagtccc
aggtctgaacccttaaaagacaaaacagatgaaaagggaaaatggattgatccaaaagtg
atagagctaaatgacaactccgaacctgaggaagacattgattacattcctccttcacct
cctcctgatgagacatcttatatgccttctacaactgagacaagaactctatcaggcagt
gttcagagcagagacgaacctttctggtcaaacagccccgccacaactctgcctaaacct
tctagtcacctctccagtgacaaaacaaaggaacaactctttagtattatggagtccatc
tgttctctggttgattccatccctgaacatgaactgatcgctttgtcctgtgggaatgat
cttttgctgaagagggcccacaggaagaggattcttgcttgtggggctgattctttatgt
aggatgatgcagcagccagacagcacagtgatttctgacaccagcttcaaacgcactttt
tccagctgtggtgcatctagtctgatgtcacccagcacttgcctgcgtgtgaacactaaa
aagcccctccagccccaaagctcttcagtcatctctgtggactatgactctgattgcttt
gacattgccagtgtaaaaccctggcaaaggatggacagcagggcaatatatgtagaaaat
gagagtatttgcgattctctgtcagcccacagctccaaaaacccaccatttaatctctca
aagaaaaccggctctggtgctgatgagtcagatctttttttctcaaccaagaactcagaa
gatgtgcaaaacaaatctaaaacctcaacctctgcaactgcagcagacttggaaacagat
gacttctatgttgacgatttcgatatagatgacttgaatgattctgacatccctgattac
tttgatgaaccttcatctaagtcgggtcagaacctaagcgctgtatttgctgcagtgaaa
gaagggggaccaaacaagtcgtcatgggacaagaacccagtgactcctgtttctgctcca
aaacctcaaaggatttactcaccagagcccaactttaaaaacccagctcacgatcgcttc
cgaggctttaacttcccccattcaccagagatgatgaagatttttcataagcgttttgga
ctccaccagttcagattcaatcaactggaagcaatcaatgctactcttctgggagaagat
gtgtttgttttgatgccaacaggtgggggtaaaagtttgtgctaccagttacctgcctgt
gtctcacctggagtcactattgtcatttctccacttaaatcgcttattgttgatcagatc
cagaaactcaccaccctagacattccagcaacaagtctatctggtgataaaagtgacagt
gaagcagggaggatttatgtgcagctctccaggaaagacccaatcattaaactgctgtat
gtcacacctgaaaaggtgagtgcaagcaacaggttgatctcagctctgcaaaacctatac
gagcgaggccttgtagcccgctttgtcatcgacgaggcacattgtgtcagtcagtggggt
catgattttcgtccagactacaagaagttgcatgaacttcgtcaaaagttccccaacata
ccaatgatggccctgacagctaccgctaccccccgtgtgcaaaaagacattctcaaccag
ctaaacatgagtcgaccacaagtatttaccatgagcttcaacagaacaaacctcaagtac
tcagtgttgccaaagaaacccaaaaaggttgacgaggactgcatcggctggatcaaaaag
cactacccacgtgactctggcattgtgtactgcctgtctcgtaatgactgcgatgctctg
gcagagagtctgaagagagcgggaattcaagctctgtcttatcacgccggtttgagtgat
ggcgacagagaatatgtgcagagcaagtggatcaatcaggacggttgccaggtcatctgt
gccacaatagcctttggcatgggtatagacaagcctgatgtgcgctacgtgatccacgcc
agcctgccaaaatcaatggagggttactatcaggagtcaggaagagccggcagagacgga
gagatctctcactgcattctgttttattcctacactgatgtgcaccgcatcaaaagaatc
atcagcatggacagagaaggtgacagacacaccaagcaaactcattacaacaacctacac
agcatggtgcacttctgtgaaaacgtgatggagtgcagaagaattcaattgctcgcctac
tttggagagctgaagttcaaccgaaacttctgtaaagaccatcctgacgtcagctgtgat
aactgtgccaaacccaaccaatgtaaactgaggaaggtgaccgatgatgtgaaaaagatt
gtgaggtttgtccaggagaactgtgagaaagttggagcaaggtttgccaagacacctcag
cagaaccgactgacacttaacatgcttgtagacatatttataggtgctaaatctgccaag
atacagacaggaatgtttgggatgggagcaggatactctcgtcataatgcagaccgtctt
ttcaagaaactggttctggataacgttctggtcgaggatctctacatcaccaacaatggc
caagctgtgacttacatctctgctggaccaaaagcaatgaatgtactgtctggacacatg
gaggtggagttttacgagacggagagcgcgtcgagcatcaggaagcacaaagctgctgtc
tccaagaacgtctcccagagagaggagatggttcagaattgtctgaaggagctgatagat
ctgtgcaagcagctgggcaaagcgtttggccttcactattacaacatcttctccaccgca
accttgaagaagatatctgagaaactttcctctgatcccgaagtcctcctacaaattgat
ggcgtgacggaggacaaactggaaaagtatggagctgaagtcattaaggtgcttcaaaaa
tactctgaatggcagctacctgtagatgagcagaccgaaagtgttggagacggctggata
gacacaagacgctcagaagatgactctacagagtcctccacatatttccgcaaccagact
gcacagggacagaagaggaagaaaggtcctttcttcaactattctaagaagagaaaagct
tacggcaaccagagctgctcttctaaaggtcgtggatacaactacaataaacagtcgtct
tccggctccaggggtggctcccacagttcaggtcgagggtccaggagcactgcaggagat
gcaccaggaggcaagagaccaggaatcctgtctgccccgacgcctcagggcaaccagcgg
ccctttttaaagccaaccttttctcacatgagctaa
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