KEGG   Girardinichthys multiradiatus (darkedged splitfin): 124857844
Entry
124857844         CDS       T08099                                 
Name
(RefSeq) poly(U)-binding-splicing factor PUF60-like isoform X1
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
gmu  Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124857844
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gmu03041]
    124857844
Spliceosome [BR:gmu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    124857844
 Complex B
    124857844
SSDB
Motif
Pfam: RRM_1 DUF1543
Other DBs
NCBI-GeneID: 124857844
NCBI-ProteinID: XP_047205329
LinkDB
Position
21:30647946..30665288
AA seq 540 aa
MAVTNTAGGEALTMENGQGTGSKLGLPPLTPEQQEALQRAKKYAMEQSIKSVLVKQTIAH
QQQQLTNLQMAAVTMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFA
PFGPIKSIDMSWDSVTMKHKGFAFVEYDVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQ
AQPIIDQLAEEARAYNRIYVASVHPDLSDDDIKSVFEAFGRIKSCTLARDPTSGRHRGFG
FIEYEKPQSALDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPTTPGGLPPAAAVAAAAAT
AKITAQASINPFQRDLMALQEAVAGASVLGALTAPQLLGQQIGLPQAVMAAQAPGVITGV
TPVRPPIPVIPQVGLVNPVLASPPVLSNQASGSNQQEKKEEKEETLQDGTGQEMLSDQEH
MSISGSSARHMVMQKLLRKSESTVMVLRNMVGPEDIDDDLEGEVTEECGKFGTVNRVIIY
QEKQGEEEDADIIVKIFVEFSVASEMNKAIQALNDRWFGGRKVVAEVYDQDRFNSSDLSA
NT seq 1623 nt   +upstreamnt  +downstreamnt
atggcggttacgaacactgcgggaggtgaagctctgacgatggagaatggacaaggcaca
ggctccaagcttggcctgccgcctcttaccccagagcagcaagaggcacttcagagggcg
aagaagtatgccatggagcaaagcattaagagtgtgttggtgaagcagaccattgcacat
cagcagcagcagctcaccaacctgcagatggcagcagtgacaatgggctttggagatcct
ctctcacctttacaatcggtggcagctcagcggcaacgtgcgctggcgatcatgtgtcgg
gtgtatgtgggctccatttactatgagctcggggaggacaccatcagacaggcctttgcc
cccttcggcccaatcaagagcattgacatgtcttgggattcggttacaatgaagcacaag
ggctttgcctttgtggagtatgatgtgccagaagctgctcagctggctctggagcagatg
aactcggtcatgttaggcgggcggaacattaaggttgggcggccaagtaacatcggtcag
gcgcaacccatcatcgaccagctggcagaggaggcacgtgcctacaaccggatctacgta
gcgtctgtccaccctgacctgtcagatgacgacatcaagagcgtgtttgaggccttcgga
aggattaaatcgtgcacattagctagagaccccacatcagggcgacacagaggttttggc
ttcattgagtatgaaaaacctcagtcagccctggatgcggtgtcctctatgaatcttttt
gacctgggtggtcagtacttgcgagtcggcaaagcagtgactccaccgatgcccctattg
acccccacgaccccgggtgggctgccacctgctgcggctgtagctgcagcggcagctacg
gctaagataacggcccaggcaagtataaatcccttccaaagggatttaatggccctccag
gaggcggtagctggcgcgtcagttttgggggcgttgacagcaccacagcttcttggacag
cagataggattacctcaggctgttatggctgctcaggcaccaggtgttatcacaggtgtg
actccagttcgtcctcccataccagtgattccccaagttggtctagtgaacccggtgctc
gcatcaccgcctgtgctgtctaaccaagccagcggctcgaaccaacaggagaagaaggag
gagaaagaggagacgcttcaagatggtacaggccaggagatgttaagtgaccaggagcac
atgagcatctcggggagcagtgccagacacatggtgatgcagaagttgctcagaaaatca
gagtccactgtgatggtgcttcgaaacatggttggaccagaggacatcgacgacgacctg
gagggcgaagtgacggaggagtgtgggaagtttggcaccgtcaacagagtcatcatatac
caggaaaagcaaggagaggaggaagatgcagatattatagtcaaaatctttgtagagttt
tccgtggcctcagagatgaacaaagctatccaggccctgaacgaccgctggttcggaggc
cgcaaagttgttgcagaagtgtatgaccaagaccgttttaacagcagtgacctttctgca
taa

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