Girardinichthys multiradiatus (darkedged splitfin): 124857940
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Entry
124857940 CDS
T08099
Symbol
pan3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124857940 (pan3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124857940 (pan3)
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124857940 (pan3)
mRNA degradation factors
3'-5' decay
Pan complex
124857940 (pan3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf-CCCH_4
zf_CCCH_4
Torus
Pkinase
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
124857940
NCBI-ProteinID:
XP_047205498
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All DBs
Position
21:24066313..24095751
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AA seq
793 aa
AA seq
DB search
MNSGLPPSAAPLGGAGIPSVKVKFCRYYAKDKTCFYGDECQFLHEDPSMGSMSLHGGGGS
PIPLPMAGGGGTPVGYSLGGTAAAAIPGGGGTGVSKKSEALGPAGTTMEGQLLTIPGLEG
PGLSDASLTNSYFSSSFIGVNGFGSPAESKYTMMQRMTTSSSSPSLLNDGAKNFSHSAHD
PVNSSTSPLFSDFAALSLAQRRKAPNPAASEFIPKGAPRMAAMTQSAVQTYPSPLFAHPG
LGGSTAALAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPANYMVPTTASDQGAHII
QKETVGGTTYFYTDNTPVPMAGMVFPTFHIYPPTAPHVAYMQPKANAPSFFMVDELRQEL
IHRHLITMAQIDHSENPDVPSEVDSYHSLFPLEPLPPPNRMQKTSNFSYITSCYKAVNSK
DDLPYCLRRIHGFRLVNTKCMMLVDMWKKIQHSNTVTLREVFTTKAFGDHSLVFSYDFHA
GAETMFSRHFNDPAADSYFTKRKWGQHEPPPPRQHAGLLPESLIWAYIVQLSSALRTIHT
AGLACRVMDPSKILITGKTRLRVNCVGVFDVLTFDNSQTNHLALMPQYQQADLVSLGKVV
MALACNSLAGIQRENLQKAMELVSINYSSDLKNLILYLLTDQSRLRSVNDIMPMIGARFY
TQLDASQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPAWSETGDRYLLKLF
RDHLFHQVTESGTPWIDLSHIVSCLNKLDAGVPEKISLVSRDEKSVLVVTYSDLKRCFDS
TFQELQAAAAGSL
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtggactcccaccttccgctgctccgctcgggggtgccgggatacccagtgtc
aaggtgaagttttgccgatactacgcgaaagacaaaacctgcttttacggagatgagtgc
cagttcctgcacgaggatccctccatgggaagcatgtcgctgcacggaggcggtggcagc
cccatcccgctgccaatggccggaggtggcgggacgccagtggggtattccctcggcgga
acggcggcagcggccatcccaggcggtggagggaccggagtgtcaaagaaaagcgaagca
ctggggcctgcaggcacgactatggaggggcagctgctgaccatcccaggattggagggt
ccaggtctcagcgatgccagtctcaccaactcctacttcagcagcagcttcattggtgtc
aatgggttcggaagcccggcagagtcgaagtatacaatgatgcagcgaatgactaccagc
agcagctctcccagtcttctcaatgatggtgccaagaacttcagccacagcgctcatgat
ccagtgaactcctcgacttcgccactgttcagtgattttgctgctcttagccttgcccag
aggagaaaggctcctaaccccgcagcgagtgagttcatccctaaaggcgccccgcgcatg
gctgccatgacgcagtctgcagttcagacctacccttctccgctctttgctcatcctggt
ctcggaggctccacagctgctttggcgccaggtatgtctttgtccgctggatcatctcct
ctccactccccaaagatcacacctcacacctcacctgcccctcgtcgacggagtcacacc
ccaaaccctgccaactacatggtgcccaccactgcgtccgatcagggcgctcacatcatt
cagaaagagaccgtcggggggacaacgtacttctatacagacaacaccccagtgccaatg
gcagggatggtgtttcctaccttccatatctacccccccactgccccccatgtggcttac
atgcaaccaaaagccaatgcgccgtccttcttcatggttgatgagctccgacaggagctg
attcacagacatctgataaccatggcccaaattgaccactcagagaacccagacgtacca
tcggaggtagacagctaccacagcctgttccccctcgagcctctccccccacctaaccgt
atgcagaaaaccagcaacttcagctacatcacctcctgctacaaggcggtcaacagcaag
gatgacctaccatactgcctgaggagaatacacggtttccgccttgttaatacaaagtgc
atgatgctggtagacatgtggaagaaaattcagcactcgaacaccgtgacacttagagag
gtcttcaccacaaaggcctttggagaccactcattggtcttctcgtacgacttccacgca
ggtgcagaaacaatgttcagcaggcattttaatgacccagcggcagactcgtacttcaca
aagaggaagtgggggcaacacgaacctccaccaccgcggcagcacgcaggccttcttccg
gagtcactgatctgggcctacatcgtccagctcagctcggccttgcggaccatccacaca
gctggtcttgcttgtcgggttatggaccccagcaagatactcatcactggcaaaaccagg
ttacgggtgaactgcgtcggggtgtttgatgtcctaacttttgacaacagtcagaccaat
catcttgccctgatgcctcagtaccagcaagccgatctggtttcgctgggcaaggtggtg
atggctttggcatgtaattcactggctgggattcagagggagaacctgcagaaggccatg
gagctggtgtctataaactactcttcagacctcaagaaccttattctgtacctgctgact
gatcagtctcgcctgcgcagtgtcaatgacatcatgcctatgattggagcacggttctac
acgcaactcgatgcatcgcagatgagaaatgatgtcattgaggaggaccttgcaaaggag
gtacaaaatggtcgcctcttccgcctgcttgctaaactgggaaccatcaacgagcggcca
gagtttcagaaggacccggcgtggtctgagacaggcgaccgctacctgttgaagcttttc
cgggatcacctgtttcaccaggtgactgaatcggggacgccgtggattgacctcagccac
attgtctcctgcctcaacaaactggacgcgggtgttcctgagaagatcagcttggtgtcc
cgggatgagaagagcgtcctggtcgtcacttattcggacctgaagcgctgcttcgacagc
accttccaggagctgcaggctgcagccgccggctctctgtag
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