Girardinichthys multiradiatus (darkedged splitfin): 124857968
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Entry
124857968 CDS
T08099
Symbol
lama1
Name
(RefSeq) laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04510
Focal adhesion
gmu04512
ECM-receptor interaction
gmu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124857968 (lama1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124857968 (lama1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
124857968 (lama1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_II
Laminin_I
Laminin_G_3
Transcrip_act
Motif
Other DBs
NCBI-GeneID:
124857968
NCBI-ProteinID:
XP_047205556
LinkDB
All DBs
Position
21:41584698..41637257
Genome browser
AA seq
3069 aa
AA seq
DB search
MKLLLLLILMERAAAQQKGLFPAIFNLASNAEISSNATCGDPEPEVYCKLVEHVPGRRIK
NPHCPKCDANSVLSKERHPITNAIDGTNQWWQSPSIKNGRQLHWITITLDLKQVFQVAYI
IIKAANSPRPGNWILERSLDGVTFDPWQYYAIGDSECLSRYNVTPRLGPPTYRSDTEVIC
TSYYSRLNPLEHGEIHTSLINGRPGADDLTPDLLNFTSARYIRLRLQRIRTLNADLMTLS
IHDPRDIDPIVTRRYYYSIKDISVGGMCICYGHAQSCPLDPVTKKLKCVCEHNTCGESCI
ECCPGYRQMPWQPGTLSEGNTCEKCNCHNKASDCFYNQTISDLSLSLNSHGVRQGGGVCV
NCQQNTTGINCETCRDGYYRPAEVSPYSDFPCVECKCDLQGSKSSVCSKEDTDAGVSAGQ
CQCKEGFSGQQCDRCAFGFRDFPHCVRCECNLAGSNNTDPCRPCTCKVNVMGVNCDVCKP
GFYNLQQRNPLGCTDCFCFGVSNVCESSASSITQLFFSDAVLQSSESLQAALVVHGNDLS
IPSNASFGTAHKHILWWAAPSSFLGNKLVSYGGLFIYSVVYDVPLDNKDQTLPVLSDVIM
EGNGRSLRLSSPLLLFVSPLAEQSVSVEMFPQQFVDDQTGGLITRDDLLLVLTNLTSLLV
RVHLNTSAQRQIRLSSVSLDVIDSGSGSGVQAVAVETCECPWGYSGTSCEACLPGFYRVG
GVLFGGNCMQCECNAYSTQCDISGVCEGCTHNTTGPHCDQCLPGFYSDPTKDDCQLCPCP
LTERSNSFSPTCVVDASGKVSCDQCQHGYTGTNCERCTSGFYGNPQVMGGACVSCECNGN
VNVSEAGYCDTVTGECLRCLSNTAGKHCEVCRPGYYGDAVLTKDCKNCGCDVNGSLSTVC
DITTGQCLCRENVTGHTCDRCQSGFFGLRSGRSCQPCGCSRSGSVSELCDEDGQCHCKDG
VAGVRCDHCSRGYYGYQGINCTACICDHTGGNCNPNSGECVCPPNTEGDTCNRCETGYWD
HDPTTGCKACSCSASGSSSPQCDLLSGQCPCKDGFSGRSCDWCAPGYYGYPACSACSCDV
AGTNETFCSKTLGVCECGRTGECVCKSGVSGRRCEECVSGWFALSDQNPNGCSECFCSGL
SRDCEEQGGLTRVPISIGRSPDVLSLVSLSSLQSVKSGVYQHGGEMLLDTRQLNTSGLVG
PLYWRMPAQVEGDQLMSYGGLLSYIITFYAEDGSGLSNQEPQVLMRGGTLRKHIIYTDMV
TPSNSIGTQHNIKLMEHKWKYFNSVSQMAVTHADFLSVLNNIQYILIKASYGTGLQQSRI
SNITMERAVSAESGDLQERAKLIESCLCPPGYSGLSCQECAAGFFRQPQSELPLQSLKTM
TVRPCVQCRCNNHSASCDPETGDCQDCKHHTSGRRCDICAPGYYGNISGSASDCSLCACP
LLDNSFSPTCVSDGAGDFRCTSCLNGYEGRYCERCSAGYHGNPTLPGGICLICRCSGWGS
FRQVCNELTGLCECKPGVRGQLCDQCEERHVLQQEECVPCDDGCTSVLLDDLDRLNDLFL
SVNLSAVTMAPYRQMVLLENRIKYFKAGISPNKTVVSQLSRLDEDLHHLTSDLSTLQQQL
IHLSESLMELHISTNNSWSHSELLLRRVCRLQDNIQVLQREAGHLNQTNENEFNVANKTH
LLEEVGSMLQVIRGVNLTAAKSAANQELSFSESLIHSLELDLLARWAAGEDRPHLLRNSL
GVAMSTLQHASTRLSEAAQRNTETHNLLDAVATLQHHHKAAHQNLSSGFLLVDRLMEDSQ
FLLEDTLSLTADLTKSSAVELLASQLDQWCPLLRKHVEALVVGLKMTDALENIYHAEAHA
HQLQSHVHSLHSSMMSVFNMSQNTTQMAHLEDDIIRRFGSAHQEALTGLISASLALNMTV
QSGQTLSEKGGVRLNITSNVLEESWQLNNMAKDLQMNVSMVTTRLQLVRDGVHNFSLLLH
QPIRELQRLPNGSSRSTKQAQVQAEAAHFGLQGALLRLQKLKVQLQNSSSVVELTNITVM
ETNGLMGQAQTAANEVQRRLEEAEHRTQHLMERIKPLSMLGETLNRNLSDIRELIDQARR
QAASIKVAVQADRECVRSYRPPIQSSNFNTLSLILKTSHPKNLLFYLGSNTTVDFLAVEM
HNGKVSLLWNLGSGTTRLQFPETDIANNRWTKINATRFGAHAALSVHQLDSESAPLPAVT
SSSPGSSRVLDIDKNTMIHIGGMGADTQRPAALHSSSFQGCLGEASLNERNIGLWSYDSR
EGKCGGCFSSPQAEETSFYFDGSGFSVVQKSLRATSTSIVLLFKTLSPGGLLLYLASNNT
RDFLSLELVEGHVRLTFDLGSGALIQTSNRKYNTGVWYKVTLQRNKRKGYLSIMAAGQSS
EKEVLEAESPGTASDLNLYDLDPIYIGGFPFSRPIRRQVVSRAYVGCIKNVEIARSNFDL
LKDAYGVRKGCVLKAVRSVSLLSGGFVQINPPSFSQEAELLFTFSSVNQSGVLLAAFSDD
RAHRQYFLSLHLVSGMVEAELGDLGGATRKVLVKKANGGSFSDGREHSVIITVNRKSLSL
LVDDEHLKSVSLMPGGFSRLSPSSLFIGGLPPEKASRLPVRLRVLFQWFRGCIQHLVMGG
ALVDLSVAVRYKGAELNSCLLEKSTVGAVLPEDLDAKPTPDPAHLHLAPPTHRSALTAGA
LTCASDQEPSLLPSAAQFGLSRHSHMTFIINPSAVRKSVSVRMSVRSQALDGLMFLLSDS
KQMDFVVLSLKGGRVMLSADLGKGPSSIVSSVAVNDGRWHIVTAEVSRKSVSVTVDYSPP
ASIPIRGNQLDVDKTLFLGGLPHGVNSRRISVSSSFPGCIRSVSLNGTMLDLSKPNSRDD
VTSCFSKDQKGTYFNGSGHAELMHDGYKVGADMLVSLEFRTSRSEGVFLGISSAKVDAVG
LEMVDGQVVFNVNNGAGRVSVRSIGQMLCDGHWHHLLARKTKHALTLSIDGSKYNTLNPY
PQSTSAETNNPVYLGGFPAGVKQNCLTIRSSFRGCLRNLQLAKSHLNIPLDLSSSHYLSG
VTPYSCPAA
NT seq
9210 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgttgctgctgctgattctgatggagcgagctgcagctcagcagaaaggattg
ttcccggccatctttaaccttgccagtaatgcagagatcagcagcaatgccacatgtgga
gacccagaaccagaggtttactgtaagcttgtcgaacatgtcccaggtcgaagaatcaag
aacccacactgccccaaatgtgatgccaactctgtcctgtctaaagaacgtcatccaatc
acaaacgccattgatggaaccaatcagtggtggcagagtccgagcatcaagaatggacgc
cagcttcactggataaccatcaccctggatctgaaacaggtttttcaggttgcctacatc
ataatcaaagccgccaattctccacgaccaggtaactggatccttgagcgctctcttgat
ggtgtgacctttgacccctggcagtactacgccatcggtgactctgagtgtttgtctcgt
tacaacgtcacaccaagactaggaccgcccacctacagaagtgacaccgaggtcatttgt
acgtcctactactccagactgaaccccctggaacatggggagatccacacctctctgatt
aatggacgccctggagctgatgatttgacccctgaccttctgaactttacatcagctcgt
tacattagactgagacttcagcgaatcagaacgctcaatgctgatttgatgactttaagc
atccacgacccacgagacattgacccgattgtgacccggaggtattattactccatcaag
gacatctctgtaggtggaatgtgcatctgctatggacacgcccagagctgcccactggac
ccggttaccaagaaactaaagtgtgtgtgtgaacacaacacctgtggggaaagctgtatc
gagtgttgccctggttaccgtcagatgccatggcaaccaggaaccctctctgaagggaac
acctgtgaaaagtgtaactgtcacaacaaagccagtgactgtttctacaatcagaccatt
tctgacctcagcctgagtttaaacagtcatggtgttcgtcaggggggcggagtctgtgtc
aactgtcaacagaacacaaccgggatcaactgtgagacctgcagggacggatattacaga
ccagctgaggtgtctccgtactctgacttcccatgtgtggagtgtaaatgtgacctacaa
ggatccaaatcatcggtgtgcagcaaagaagacactgacgcaggtgtgtctgcaggtcag
tgtcagtgtaaggaggggttctccggtcagcagtgtgatcgctgtgcgtttggattcaga
gactttcctcactgtgttcgctgtgagtgtaacctggcaggaagcaacaacaccgatccc
tgcaggccctgcacctgcaaggtgaatgtcatgggagtcaactgtgatgtgtgtaaacca
ggcttttataacctgcaacagaggaaccccctgggctgcaccgactgtttctgttttggt
gtttctaatgtctgtgagagctctgcctcatccatcactcagctgtttttttcagatgct
gtcctccaatcatctgaatctctccaagctgctctagttgtccatggaaatgacctcagc
attcccagcaatgcttcctttggcacagcccacaaacacatactctggtgggcagcaccc
agcagtttccttggcaacaagctggtgtcctatggagggctgttcatctactctgttgtt
tacgatgtccccctggacaataaggaccagaccttacctgtcctctctgatgtcatcatg
gagggtaatggccgatctcttcgtctctcgtctcctttgctcctcttcgtctctccccta
gcagaacaatctgtctctgtggagatgtttccacagcagtttgtggatgatcaaactggt
ggtctgataactcgagacgacctgctgctggttctgactaacctgacctcactcttggtc
agagttcatctgaatacttctgctcaaagacaaatacgactcagctcagtctctctggat
gtcatagattctgggtcaggttctggtgttcaggcagtcgcagtggagacatgcgaatgt
ccatggggttacagtggaacttcctgtgaggcatgtctaccggggttctacagagttggt
ggggttctgtttggaggaaactgtatgcagtgtgaatgtaacgcctattccacccagtgt
gacatcagtggagtctgtgagggctgcacccacaacacaactggtcctcactgtgatcag
tgccttcctggtttctacagtgacccgactaaggatgactgtcagctgtgtccatgtcct
ctaacagagcgttccaacagtttcagtcctacctgtgtagtggatgcgtctggaaaggtg
tcatgtgatcagtgccagcatggatacactgggacaaactgtgagaggtgtaccagtggt
ttctatggtaacccacaggtcatgggtggggcctgtgttagctgtgagtgtaacggtaac
gttaacgtcagtgaggccggatactgcgatactgtgactggggagtgtctgcgttgcctc
agcaacacggcaggaaaacattgtgaggtctgtcgtcctggttactatggagacgcagtg
ctcaccaaggattgtaagaactgcggctgtgatgtcaacggctctttatccactgtatgt
gacatcacaacgggtcagtgtttgtgcagagagaatgtgacgggacacacctgtgaccgc
tgccagtcggggttcttcgggcttcggagtgggcggagctgtcagccctgcggctgcagc
cggtctggatctgtgtctgagttatgtgatgaagatgggcagtgtcactgtaaagatgga
gtagctggagtcaggtgtgatcattgtagccgtggttactatggttaccagggcatcaac
tgcacagcatgcatctgcgatcacactggtggaaactgtaaccccaatagcggagagtgt
gtctgcccccccaacacagagggagacacctgcaacaggtgtgagacaggttactgggat
cacgaccccaccacaggctgcaaggcgtgcagctgcagtgcctcaggaagctcctccccc
cagtgtgacctgctcagtggacagtgtccttgcaaggatggcttctctggcaggtcatgt
gattggtgtgcacctggttactatggttacccagcctgctcagcgtgcagctgtgatgtg
gcaggaaccaacgagacgttttgcagtaaaacactcggagtatgtgagtgcggacggact
ggagagtgtgtgtgcaagtctggcgtgtcaggtcggcgctgtgaggaatgtgtttctggt
tggtttgctctgtcagaccagaacccaaatggatgttctgaatgtttctgttctggactg
agcagagactgtgaggagcagggaggactcaccagagtccctatcagtatcggtcggtct
cctgatgtcttgtcattggtcagtctgtccagccttcagagtgttaaatctggggtttac
caacatggcggcgaaatgctgctggacacccggcagttaaataccagtgggctcgttggc
cccctctactggagaatgccagctcaggtcgaaggggaccagctgatgtcatatggtggc
ttgctctcttacatcatcactttctatgctgaggatggctctggactgtccaatcaggag
cctcaggtgctcatgaggggtgggaccttgaggaagcacattatatacactgacatggtt
acccctagcaacagcatcgggacacagcataacatcaagctgatggagcacaagtggaaa
tattttaactcggtgtctcagatggcggtgacccatgcagactttctgtctgtcctcaat
aacattcagtacatcctcatcaaggcttcgtacgggaccggcctgcagcagagcaggatt
tctaacatcactatggagagagctgtcagcgcagagtcaggtgacttacaggaaagggcc
aaactgattgagtcatgtctctgtccacctggatacagtggactgtcctgtcaggagtgt
gcggcaggttttttccggcagcctcagtctgagctcccacttcagagtttgaagaccatg
acagtacgtccatgtgttcaatgtcgctgcaacaaccacagtgcaagctgtgacccagag
accggagactgtcaggactgtaagcatcacaccagcgggcggagatgtgatatctgtgcc
ccgggttactatggaaacatcagtggctctgcaagtgactgttctttgtgtgcctgcccc
ctgctggataatagtttcagtcccacttgtgtgtcggatggagctggagatttccggtgc
acctcttgtctgaatggatatgaaggcagatattgtgagaggtgttctgctggttaccat
ggtaacccgaccttgccaggtgggatttgtttgatttgtcgctgtagtgggtggggctcc
ttccgtcaggtgtgtaatgagcttacaggactgtgtgagtgcaagcctggggtcagaggt
cagttatgcgaccagtgtgaggagcgtcatgtcctgcagcaggaggagtgtgtgccatgt
gatgatggctgcaccagcgttctgctggacgacctggacagacttaacgacctcttcctg
tctgtcaacctgagcgccgtcaccatggcgccttaccgacagatggtgctgttggagaat
cggatcaaatacttcaaggctgggatttctccaaacaaaactgtagtgtcacagttgtcc
agattggacgaggacttacaccatctgacctctgacctcagcaccctgcagcaacagttg
atacatctgtctgagagcctgatggaacttcatatctccaccaataacagctggtcccac
agtgagctgctgctgaggagggtctgcagacttcaagacaacattcaggtgctgcagagg
gaggcggggcatctgaaccagaccaatgagaacgagttcaatgttgccaataagacccat
ctgctggaagaggtggggtccatgctgcaagtcatcagaggtgtaaatcttacagcagcc
aagtcagcagccaatcaggagctgagcttctccgagtctctcatccactcgctggagttg
gatttactggccaggtgggctgcaggtgaagacaggcctcacctcctccgcaattccctc
ggtgttgccatgtcaacactccagcatgcaagcactcgtcttagtgaagctgcacagcga
aacacagaaacacacaaccttctggatgctgtagccactctgcagcaccaccataaggca
gcccatcagaacctgagttctgggtttctgttggtggacagactgatggaggacagtcaa
ttcctgctggaggacacactcagtctgactgcagacttaacaaagagcagcgcagtggag
ctgttggccagccagctcgatcagtggtgtcctctgctcaggaaacatgtggaagcctta
gttgttgggctgaaaatgacggatgctcttgaaaacatttaccatgcagaagcccacgcc
caccagcttcaaagccacgtccattctctccatagctccatgatgtcagtgtttaacatg
tcccaaaacaccacccagatggctcatcttgaagatgacatcatacgacgttttggctcc
gcccatcaggaagccctaacaggcctcatctctgcctctctcgctctcaacatgactgtc
caatcaggacagacgctgtcagagaagggcggagtcagactgaacatcacctctaatgtt
ttagaggaaagttggcagctcaacaacatggctaaagatctgcagatgaatgtttccatg
gtaaccaccagactgcaattggtcagagatggtgtgcataacttcagcctactgctccat
cagccaatcagagagctccagaggctccctaatggttcatccaggtcaaccaagcaggct
caggttcaggctgaagcagcccactttggtctgcagggggcactgctgaggctgcagaag
ctcaaggtgcagctgcagaattcctcttctgtggtggaattgaccaacatcacagtaatg
gagacgaatggcctgatgggtcaagctcaaactgcagccaatgaggtgcagcgcagactg
gaggaagcagagcatcgcacacaacatctgatggaaagaataaagccactgagcatgctg
ggagaaacgttgaacagaaatctgtctgacatcagagaactgatcgatcaggcccgaagg
caggcggcatcgataaaggtggcggtgcaggcagacagagaatgcgttcgatcgtacaga
ccacctattcagtccagcaacttcaacactctgagtctgatcctgaagacttcccatcca
aagaacctgctcttctacctgggcagcaacaccacggtggacttcctggcagtagaaatg
cataatgggaaggtttctttgctgtggaacctgggttctggtacaacacgcctgcagttt
cctgaaaccgacatcgccaacaaccgatggaccaaaatcaacgctacaaggtttggggcc
cacgccgctctatccgtccatcagctggattctgagtcagctcctctgccggcagtaaca
tcatcttcaccaggatcatcgcgagttttagacattgacaaaaacacaatgatccacatt
ggaggaatgggagctgacactcagcgtcctgcagcgctgcactcatcctccttccaagga
tgcctgggtgaagcctcattgaatgagagaaacatcgggctgtggagctacgacagccgg
gagggaaaatgtggaggctgcttcagcagtccccaagcagaggagacgtctttctacttt
gatggctctggattctctgtggtccaaaagtcactgagagccacatccacctccatcgtg
ttgctgtttaaaactctgtctccaggtggactgctgctgtacctggcctccaacaacacg
agggacttcctgtctttagaacttgttgagggacatgtccgtctgacctttgacctgggc
tcaggtgctctaatccagacctccaacaggaagtataacacaggagtttggtacaaggtc
accctgcagaggaacaaacgcaaaggttacctgtccatcatggcagcaggccagtcgtca
gagaaggaggtattggaggcagagtctccaggaaccgcctctgacctgaacctctatgac
ctcgacccgatctacataggaggatttcctttttccagaccaattaggcgacaggtggtg
tcccgtgcatatgttggctgtataaaaaatgtagagattgctcgttccaactttgacctg
ctgaaggacgcatatggagtccggaagggttgtgttctaaaggcggtgaggagtgtctct
ctgttgtctggaggcttcgtccagatcaatcctccatcattcagtcaggaggcggagctt
ctctttaccttctcctccgtcaaccaatcaggagtcctgctggcagcctttagtgatgac
cgagcacaccgacagtacttcctgtcacttcacctggtctcaggtatggtggaggcggag
cttggtgatctaggcggagccacacggaaggttctagtaaagaaggctaatggaggatca
ttcagtgatggaagagaacactcagtgattataactgtcaacaggaagtctctatccttg
ctggtggacgatgaacacctgaagtctgtctctctgatgccaggaggattttctcggctg
tctccatcctctctcttcattggtgggctcccgcctgagaaggcgtcccgtctgccagtc
agattgcgtgttttattccagtggtttagaggctgcattcaacacctggtgatgggtgga
gcgcttgtggacctatcagtcgctgtcaggtataagggagcggagcttaacagctgcctg
ttggagaagagcactgtgggggcggtacttcctgaagacctagatgccaaaccaacacct
gaccctgcacacctgcatttagctccgcccacacaccggagtgctctcacagctggagca
ttaacatgtgcgtcggaccaggaaccgtccctcctgccgtcggcagctcagttcggtttg
tccaggcacagccacatgacgttcatcatcaaccccagtgctgtccgaaaaagtgtttca
gtgaggatgtcggttcgaagccaggctctggatggcttgatgttcctcctgtctgactcc
aagcagatggactttgttgtcctcagtcttaaaggggggagggtcatgttgtcagctgac
ctagggaaaggcccctcctctatcgtctcgtctgttgctgtcaatgatggaaggtggcac
attgtgactgcagaggtgagccggaagtctgtgtcagtgacagtggattattcgcctcca
gcgtctattccaatcagaggtaaccaactggatgtggacaagacacttttccttggagga
ttacctcacggtgtgaacagcaggaggatcagcgtcagcagcagtttcccaggttgtatc
cggtctgtcagtctgaacggcaccatgttggatttgtccaagccaaactcgcgggatgat
gttacttcctgcttctccaaggatcagaaaggaacttactttaatggcagtggacatgct
gaactgatgcatgatgggtataaggttggcgctgatatgttggtgtctctggagttccga
accagccgatcagaaggagtcttcttgggaatcagcagtgcaaaggtggatgctgttggg
ctggagatggttgatggacaggtggtgttcaacgtgaacaacggggcaggtcgggtgtcg
gtgcgctcgattggtcagatgctgtgtgatggacattggcatcacctgctggccagaaaa
acaaaacacgccctgactctgagcatagatgggagtaaatacaacacccttaacccttac
ccacaatccacctctgctgagaccaacaatcctgtgtacctggggggatttccagctggc
gttaaacagaactgcctgaccatcagatccagtttcaggggatgtctgaggaacctgcag
ctcgccaagtctcacctgaacatccctctcgatctcagctcctcccactacctgtcaggc
gtcactccttattcatgccctgctgcgtag
DBGET
integrated database retrieval system
