Girardinichthys multiradiatus (darkedged splitfin): 124857996
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Entry
124857996 CDS
T08099
Symbol
itgb1a
Name
(RefSeq) integrin beta-1a isoform X1
KO
K05719
integrin beta 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03271
Virion - Rotavirus
gmu04145
Phagosome
gmu04510
Focal adhesion
gmu04512
ECM-receptor interaction
gmu04514
Cell adhesion molecules
gmu04530
Tight junction
gmu04810
Regulation of actin cytoskeleton
gmu04820
Cytoskeleton in muscle cells
gmu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
124857996 (itgb1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124857996 (itgb1a)
04514 Cell adhesion molecules
124857996 (itgb1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124857996 (itgb1a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
124857996 (itgb1a)
04530 Tight junction
124857996 (itgb1a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
124857996 (itgb1a)
04810 Regulation of actin cytoskeleton
124857996 (itgb1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
124857996 (itgb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124857996 (itgb1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmu04147
]
124857996 (itgb1a)
04515 Cell adhesion molecules [BR:
gmu04515
]
124857996 (itgb1a)
04090 CD molecules [BR:
gmu04090
]
124857996 (itgb1a)
Membrane trafficking [BR:
gmu04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
124857996 (itgb1a)
Exosome [BR:
gmu04147
]
Exosomal proteins
Proteins found in most exosomes
124857996 (itgb1a)
Cell adhesion molecules [BR:
gmu04515
]
Integrins
Integrin beta subunits
124857996 (itgb1a)
CD molecules [BR:
gmu04090
]
Proteins
124857996 (itgb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
124857996
NCBI-ProteinID:
XP_047205615
LinkDB
All DBs
Position
21:complement(10345076..10377744)
Genome browser
AA seq
802 aa
AA seq
DB search
MDLQLSLIAFLGLLCCCNSQKEGNECISANAKYCGECIQAGAKCGWCTDPNFLKQGETVS
SRCDELQSLLKRGCNTSLIENPVGKLETVKNVSVTDRSKAPKNLKPEDITQVQPQKVSLT
LRSGEPQSFKLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTSLMLEMSKITSDFRI
GFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLPLTSDGSRFNNLVGVQQIS
GNLDSPEGGFDAIMQVAVCGDQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKCH
LENNIYTMSHYYDYPSIAHLVQKLSDNNIQTIFAITEEFQPVYQELKNLIPKSAVGTLSA
NSSNVINLIIDAYNSLSSEVILENSKLPEGVTIAYTSRCKNGVTNKDENGRRCSNISIGD
EVHFNISITSKGCPKQGKPEIIKVKPLGFTEEVEITLNFICECDCHSKGIENSPDCHFGN
GTYECGACRCNEGRVGRNCECSSNDVATEDMDRTCRKDNGTDICSNNGECVCGTCECKKR
ENPEERYSGQFCECDNFNCDRSGSLLCGGHGRCECRKCICEPMWNGTACDCSLDESTCLA
SNKQICNGRGRCECGACKCDDLKFQGPTCEACPTCPGVCIEHKECVECRAFGTGEKKETC
QKECSDFTLFKVKTRDKLPQPNDKSYPVMHCKERDANDCWFYYTYAVTNNTEKVVYVVEE
PECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQEN
PIYKSPINQFQNPNYGRKGAVL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggatctgcagctgagcttgatagcatttctaggactcctttgttgctgtaattctcag
aaagaggggaatgagtgcattagcgccaatgccaaatactgcggagagtgcatccaggct
ggagccaaatgtggctggtgtacagatccaaacttcctgaaacagggcgagaccgtgtca
agccgatgtgacgagctgcagtccctcctaaagaggggctgcaacacatcattaattgag
aaccccgttggaaaactggagaccgtcaagaacgtttcagtgaccgatcgcagtaaagca
ccaaagaatttgaaaccagaggacatcactcaggtgcagccccagaaagtcagccttact
ctccgatctggtgagccccagtcttttaaactgaagttcaaacgagcagaggattatccc
atcgacctgtactacttgatggacttgtcctactcgatgaaggatgatctggagaatgtg
aagaatctggggaccagtctgatgctggagatgtcaaagatcacctctgacttcaggata
ggctttgggtcctttgtagaaaagacagtcatgccttacatcagtaccaccccagccaag
ctgctgaatccatgcacaggcgaccagaactgcaccagcccgttcagctacaagaacgtg
ctgcctttgaccagcgacggctcgaggttcaacaacctagtgggcgtgcagcagatctcg
gggaacctggactcccctgaggggggctttgatgccatcatgcaagtggctgtgtgtggg
gaccagattggctggaggaatgtaactcgtctgctggtgttttccactgacgctggattc
cactttgctggggacggcaagctgggtggcattgtactgcccaacgatgggaaatgccac
ctagagaacaacatttacacaatgagccactactatgactatccctcaatcgctcacctg
gttcagaagctgagcgacaacaacattcagaccatttttgccatcacagaagagttccag
cccgtttaccaggaactgaaaaatctgataccaaagtctgcagtaggcactctgtctgcc
aactccagcaatgttatcaacctcatcatagatgcttataattctctttcttctgaagtg
attctggagaatagcaagcttccagagggagtgactatagcgtacacgtcccgctgtaag
aacggagtaaccaataaggatgaaaatggaaggaggtgctccaatatctccattggagat
gaggttcatttcaacatcagcatcacctctaagggttgtccaaaacaaggcaagcctgag
attattaaggtaaagcccctgggattcactgaggaagtggagattaccctgaacttcatc
tgtgagtgtgactgtcacagcaaaggcattgagaacagtccagactgccacttcggtaat
gggacctacgagtgtggagcctgcaggtgtaacgagggccgtgtgggtaggaactgtgag
tgcagcagcaacgacgtggccacagaggacatggaccggacctgccgcaaagacaacggc
acagacatctgcagcaacaacggggaatgcgtgtgcggcacgtgtgagtgcaagaaaaga
gaaaacccagaggaaaggtacagcggccagttctgcgagtgtgacaacttcaactgtgac
cgctctggaagcttgctctgtggagggcacggacgctgcgagtgcagaaaatgcatctgt
gagcccatgtggaatggaaccgcctgcgactgttctctggatgagagcacgtgtttggcc
agcaacaagcagatctgtaacggcagaggaaggtgcgaatgtggcgcctgcaagtgcgat
gacctcaaattccagggcccaacgtgtgaagcgtgccccacctgtcctggagtctgcatt
gaacacaaagagtgcgtggagtgccgggcatttggcactggggaaaagaaagagacatgt
cagaaagagtgcagcgatttcactctgtttaaagtgaagactagagacaagctgccccag
cccaacgacaaatcctaccctgtcatgcattgcaaggagagggacgccaacgactgctgg
ttctactacacatatgctgtcaccaacaacacagaaaaggtggtctacgtggtggaggag
ccagaatgtcccaccggcccagacatcatcccaatcgtagcaggcgttgtcgccgggatc
gttctgattggcttggccctcctgctgatctggaagctgctgatgatcattcatgacagg
agagaatttgccaagtttgagaaggagaagatgaacgccaagtgggatacgcaagaaaac
ccaatttacaagagtccaatcaatcagttccagaacccaaactatggacgtaaaggcgct
gtcctttga
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integrated database retrieval system
