Girardinichthys multiradiatus (darkedged splitfin): 124858109
Help
Entry
124858109 CDS
T08099
Symbol
sox17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
124858109 (sox17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmu03000
]
124858109 (sox17)
Transcription factors [BR:
gmu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124858109 (sox17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
124858109
NCBI-ProteinID:
XP_047205872
LinkDB
All DBs
Position
21:29671692..29673880
Genome browser
AA seq
401 aa
AA seq
DB search
MSSPDAGYASDDQTQARCAMSVMMPGMGHCQWADPLSPLGESKVKNDPCAPGGGGGGSGG
QGRGKSEPRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALPSTEKQPFV
EEAERLRVQHMQDHPNYKYRPRRRKQVKRIKRLDSGFLVHGVSEHQAQSMPGDGRVCVDS
LGLGYHEHGFQVPPQPLSHYRDTQVLGGPSYEPYSLPTPDTSPLDAVESDSMFFPPHSQE
DCHMMPAYPYHPQVADFQPHEPLPSHHSSPGIMHRHLGSAPEQPPPSYMSCPNPLAMYYN
QHCSPSHPKRHPGGAGQLSPPPDSHSHSADSMEQMHHSELLAEVDRNEFEQYLSSSSSAR
TDMAGLPYGPHETGMQGPESLISSVLSDASTAVYYCSYNSS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcccgatgcgggttacgccagcgacgatcagacccaggcaaggtgcgcgatg
tcagtcatgatgcctggaatgggacactgccagtgggccgacccgctcagtcctctcggg
gagagcaaggtgaaaaacgacccgtgcgcgcccggcggcggcggtggtggctccggcggt
cagggacggggtaagagcgaaccgcggatccggcggcccatgaacgcgttcatggtctgg
gcgaaagacgagcgcaagaggctggcgcaacagaacccggacctgcacaacgcggagctc
agtaaaatgctggggaaatcctggaaagcccttcccagcacagaaaagcagccctttgtg
gaggaggctgagcggctgcgggtccagcacatgcaagatcaccccaactacaagtaccgg
ccccggcggcggaaacaggtaaagaggatcaagaggttggactctggatttctggtccac
ggtgtgtccgagcaccaggcccagtcgatgcccggagatggcagggtatgcgtggacagc
ctgggccttggctaccatgaacatggcttccaggttcccccacaacccctgagccactac
agggacactcaggtgctcgggggcccatcttatgaaccttacagtctccccacacctgac
acgtctcccctggacgctgtagagtcagactccatgttcttccccccgcattcacaggag
gactgtcacatgatgccggcatacccttaccaccctcaggtggcagactttcaacctcac
gaacccctccccagtcaccacagcagccccggcatcatgcaccgccacctgggctccgct
ccggagcagccccctccctcctacatgagctgccccaaccctttggctatgtactacaac
cagcactgcagccccagccaccccaaacgacaccctggtggggcaggacagctttcccca
ccccctgactcccactctcactcggcggacagcatggagcagatgcaccactcagaactg
ctggccgaggtggaccgcaacgagtttgagcagtacctgagctcctcttcatcggcccgc
acggacatggcgggcctgccgtacgggcctcacgagactggcatgcagggacctgaaagc
ctcatttcatccgtgttgtcagacgccagcacggctgtgtattactgcagctacaacagc
tcgtaa
DBGET
integrated database retrieval system
