Girardinichthys multiradiatus (darkedged splitfin): 124858122
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Entry
124858122 CDS
T08099
Symbol
spata13
Name
(RefSeq) uncharacterized protein spata13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
124858122 (spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124858122 (spata13)
Membrane trafficking [BR:
gmu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124858122 (spata13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
124858122
NCBI-ProteinID:
XP_047205888
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Position
21:complement(24188262..24212843)
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AA seq
1310 aa
AA seq
DB search
MWEEERWRRISATMSRAEQKDKVLSRSEDPLQCLHQSKPDPLIRSRPLSDTYPSQSLADR
SSVPYLLSGCGAQIRPAGAAPLSDQSRINGINSSAWSNPVIGPAEGRPHNSRIMRLLSNS
RKGVVPPSSPTADSPNNEDNSSSQPWTGFSGFGVVDSFKKLRSSVLQGIQSRGAASNSGQ
NVPLPIMEMPNGSAGNSSEADLADATNHLKTADGNHVSNGNLTDQISAEFKQYGSDIEDY
DDEEADSGLTRNSRFSRSIRRAYGAGRIMLLDIENGRRVGSDKNVATCSTQKPNHRSKVD
IQTETQKENSFVKPLSRLSKSAENLHIFKLPARRKSPCPEPPSPQEDPQRTTLSNGTPNI
QRTSSTSSVDLRGRSSPMKNKGSMVKLIGSMTDLTTRRKQGLPPSPTSPSLMSPLSRLHD
DYSRRVPCLPTSERQRRPVAITAQVNSIKYTPLIHAAPENNAGLQSYQGVIDPLSSEPRD
LPDQISADISAQHEPLPAPAASNSKQMVERVSPPLSQREASQHQGQLDFDLLPNEVKSPV
LEQGPLPQTEEVSTAASSPPSDPSTCLSNTPASPTPPTDGAAASTETTSVKPRRRSGRPR
PRPISDYAQLVSRKHCIPEEVAEPNYEERTSDTRLHVKCSSDGNGSSPENCSNNGDVQRH
RPVSVIGDVDLFPADTELKEDRLPSVALSVLEPKTHPIVQQASIEKQYLQPLSRPPIPSH
QVPPYRGVSARFRPCALSQSTPIGLDRVGRRKVHRVLSAGASECTATLDDSVSEEEESSF
DELADGTPYLQPGVELSVLNELIISGHAVYAEALWDHVTMEEKELAFKAGDVICLLDASH
KDWWWGRGGDREAWFPSSFVRVRVNQEDSSAESVESVADQEDPAPRDKPSTQHREQMRTN
VVQEIMNTERIYIKHLKDICEGYIRQCRKHPDMFTELQLKTIFSNIEDIYKFQRLFLRDL
EKKYNKEEPHLSEIGSCFLMQGEGFSIYSEYCNTHPAACAELQRLVKMSKYKHFFEACRL
LQQMIDISIAGFLLTPVQKICKYPLQLGELLKYTPKDHRDHTGVNEAYEAMKKVASLINE
RKRRLESIDTIAHWQVAILHWEGPDVLERSSELIHSGELTRAVRQGKLQQRSFFLFDHQL
VYCKKDVLRRDLLHYRGRLDMDEMEVVDVPDGRDQDLGLTLKNALRLRHASTLELVCVLC
CRKVQDKQRWLQAFAKERQRVKEDQEMGIDISEEQRKQAIVNARRTKHGKIKTGYADSVP
PHQNLPALQQRHITIPTSVPQQQVFSLAEPPRRKPYHLLYSITRSAFFRK
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgtgggaagaggaacggtggaggaggatttcagcgactatgagcagggcagaacagaag
gacaaggtcttgtcccgaagtgaagaccctctccagtgccttcatcagtctaaacctgac
cccctgatcaggagcagacctctcagcgacacatatccatcgcagagccttgctgacagg
agttcagtcccctacctgctgtccgggtgtggtgcccagatacggccggcgggtgcagct
ccgctctccgaccagagcagaataaatggcatcaattcctctgcctggtccaaccctgtg
ataggtccagctgaaggaaggcctcataactctagaattatgaggctgctttctaactca
aggaagggtgttgtccctcctagcagtccgactgccgacagtccaaacaatgaagacaac
agcagctcccagccatggaccggattttcagggttcggtgttgtggactcctttaaaaag
ctgcggtcatctgtgctgcaaggaattcagagcagaggggcagcaagcaacagtggacag
aatgtacctttacccataatggaaatgccgaatggatcagctgggaacagctcggaagct
gacctagctgatgcaactaatcatttaaagactgcagacggaaatcatgtatcaaatgga
aatttaacagaccaaatctcagctgagtttaaacagtatggctcagacattgaggactat
gatgatgaggaagctgacagtggtctcacgcgcaattcccgattttccaggagcatcagg
agagcatatggagcaggaaggatcatgttgcttgacatagaaaacggaagaagagtaggt
agcgacaaaaatgtcgcgacatgcagcacacaaaaaccaaatcacaggtcaaaggttgat
atccaaacagagacccagaaggaaaacagttttgtgaagcctctgagcagactgagtaaa
agtgcagagaaccttcatatatttaagctgcctgctagacgtaaaagcccatgtcccgaa
cctccttccccacaggaagaccctcagaggaccacattgtcaaacgggacaccaaacatt
caaaggacctccagcacttcttcagtggatcttcgaggcaggagtagcccaatgaagaac
aaggggtcaatggtcaagctaattggcagcatgactgacctaaccacccgccgaaagcaa
ggtctgcccccaagtcccacctctccatctctcatgtcccccttgagccgtctccacgat
gactactctcgccgtgtgccttgcctgccaaccagtgagcgacagcgccggcctgtagcc
atcaccgctcaggtcaactccatcaagtacacccccctcattcatgccgcacctgaaaac
aacgcaggcctgcagtcgtatcagggtgtcatcgacccactttcctcagagcccagagat
ttaccagaccagatttcagctgatatctctgctcagcatgagccgctgcctgctccagca
gcaagtaactctaaacagatggtcgaacgtgtttcacccccactcagtcaacgagaggca
tcgcaacaccaaggacaacttgactttgatttgctaccaaatgaggtgaaatcacctgtt
ctagaacaaggtccacttccccaaacagaggaagtctccacagcagccagcagcccacct
tctgacccctcaacatgcctctctaatacacccgcatcacccacacctcccacagacgga
gccgcagcttccacagaaaccacttcggtgaagcccagacggaggagcgggcgccccaga
cctcggcccatctctgactacgcccagctcgtttccaggaagcactgcatccccgaggaa
gtggcggagccaaactatgaggaaaggacatcagatacgcggctgcatgtaaagtgcagc
tctgacgggaacgggagcagccccgagaactgtagcaataacggggatgttcagagacat
cggcccgtctcagtgatcggagatgtggatttgttcccggcagataccgagttgaaggag
gatcgccttccttctgttgcgctgagcgtgttggaaccaaaaacccacccaattgtgcag
caagcttcaatagaaaaacagtacttgcagcctttgtcgcgaccgccaatcccctcccac
caggtacccccctacagaggagtgtctgccagattccggccctgcgcgctctcccagagc
accccgatcggactggaccgcgtggggcggcgcaaagtccacagagtgctcagcgctggt
gcgtctgagtgtacagccacgctcgatgacagcgtgagcgaggaggaggagagcagcttc
gatgagctcgctgatggcacgccctacctccagcccggggtggagctgtccgtgctcaac
gagttgataatctcgggccatgccgtgtacgccgaggctctctgggaccatgtgaccatg
gaggagaaggagctggccttcaaggctggagatgttatctgcctcctggacgcctcgcac
aaggactggtggtggggcagggggggcgacagggaggcctggttcccttccagctttgtg
agggtgcgtgtgaaccaggaggactcgagcgctgagagtgtggagagtgtggcggaccag
gaagacccagctcccagggacaaacccagcacccagcacagggagcagatgagaaccaat
gtggttcaggaaatcatgaatactgaacgcatttacatcaaacacttaaaagacatctgt
gagggttacatccgtcagtgccggaagcaccccgacatgttcactgagctgcagctgaag
acgattttcagcaacatagaagacatctacaaattccagcggctgttcctcagagacctg
gagaagaagtacaacaaggaagagccacatctcagtgaaataggctcctgcttcctcatg
cagggtgagggcttttcgatctactctgagtactgtaacactcatcccgcagcctgtgcc
gagctgcagcgtctcgtgaagatgagcaaatataaacatttctttgaggcctgtcgcctc
ctccagcaaatgatcgacatctccatcgctggtttcttgctcacacctgtccagaagatc
tgtaaatacccactacagctgggggagctgctcaagtacacacccaaagaccacagggac
cacactggcgtcaatgaagcctatgaggctatgaagaaggtggccagtttgatcaatgag
aggaagaggcggctggagagcatcgacaccatcgctcattggcaggttgccattttgcac
tgggaggggcccgacgtgctggaacgcagctcggagctgatccactctggcgagctgacc
cgagccgtccggcagggtaagctgcagcagcgtagcttcttcctgttcgaccaccagctc
gtctactgcaaaaaggacgtcctgcgcagagacctgctccactatcgagggcgtctggat
atggacgagatggaagtggtggacgtgcctgatgggcgggaccaggacctgggcctgacc
ctgaaaaatgctctgcggctgcggcacgcctccaccttggagcttgtgtgcgttctgtgc
tgcaggaaagtccaggacaagcagaggtggttacaggcctttgccaaggagagacagagg
gtgaaggaggaccaagagatgggaatagacatcagtgaagaacaaagaaaacaggccatt
gttaatgcaagaagaacaaaacatgggaagatcaaaactggctatgccgactccgtccca
ccccaccaaaacctgccggcccttcagcagcgccacatcaccattcccaccagcgtacct
cagcagcaggtgttttctctggccgagccccccagacgaaagccttaccacctgctgtac
agcatcacacgcagcgccttcttcaggaaatga
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