Girardinichthys multiradiatus (darkedged splitfin): 124858225
Help
Entry
124858225 CDS
T08099
Symbol
cftr
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu02010
ABC transporters
gmu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124858225 (cftr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
124858225 (cftr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmu02000
]
124858225 (cftr)
Enzymes [BR:
gmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
124858225 (cftr)
Transporters [BR:
gmu02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
124858225 (cftr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFTR_R
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
DUF87
AAA_16
RsgA_GTPase
MMR_HSR1
T2SSE
AAA_23
FtsK_SpoIIIE
Dynamin_N
MeaB
Zeta_toxin
nSTAND1
Motif
Other DBs
NCBI-GeneID:
124858225
NCBI-ProteinID:
XP_047206103
LinkDB
All DBs
Position
2:5483167..5578215
Genome browser
AA seq
1493 aa
AA seq
DB search
MQKSPVEDANFLSKFVFWWISPLLRKGFTKKLELTDVYKVPSFDLADTLSERLEREWDKE
VVLAKGRPRLLKALARCFFLPFAFFGVLLYFGEASKAVQPQLSGRIIASFDPVHAPERSQ
GYYLALGLGLLFTARFMLLQPALYGLHHLGMQIRIALFSLIYKKTLKLSSRVLDKISTGQ
LVSLMSAHLNKLDESLGLAHFVWITPLQCILCTGLIWELIEVNGFCALAALTLLGILQAW
LSLKMGPPRAKRAGLINRRLALTSEIVENIHSVKAYGWEEVMETIIKNIRQDEMTLTRKI
GSLRYFYSASYFFSAILVIISAIVPYAISNGIILRRIFTTASYCVVLRMTLTRQLPGSIQ
MWYDTLGLVQKIEDFLLKEEYKVMDYSLTTVGLEMINVSASWDEGIVELFEKIKRENKAN
GHLTGDDGLFFTNLYVTPVLKSINLRLEKGMMLAVAGSTGSGKSSLLMMILGELVPSDGK
IKHSGRVSYSPQTSWIMPGTIRDNILFGLTYDEYRYTSIIRACQLEEDFDLLPDKDKTPI
AEGGVTLSGGQRARICLARAVYKDADLYLLDAPFTHLDIATEKEIFDKCVCKLMASKTRV
VVTCKLEHLKRADRIILLHNGDCYFYGTFSELQAQRPDFSSLLLGIEAYDNITAERRGSI
LTETLRRVSVDETACFRGPDANRQSFCHAPSHSHAMGDGYPEKRKPSLILNPLVAARKFS
NTFQSTTMEDGVHEHSERRFSVVPEDDQVEEVLPRSNLYHHGLQHLNGRRQSVLAFITNA
QGQERREQMQSSFRKKLSITPQCNLASELDIYARRLSKDSVFDISEEMDEEYMEECFADE
RENIFETTSWSTYLRYVSTNRSLIYVLIFIVFIFAIEVGGCVVGIFLITDVIWKDGANPS
SPNHIDEKHPNASSTPVRLIVTKNSAYYILYIFFAHSDSILALGVFRGLPLVHTLLTVSK
RLHEQMLSSVLRAPLSVLNTMKTGRIMNRFTKDMAVIDDMLPLVLFDLIQLTLLVIGCIF
TVSIMRPYIFISAIPLAIVFVVIRKYFLRTGQQLKQLEAEARSPIFSHLIISLKGLWTIR
AFGRQTYFETLFHKALNTHTATWFHYLSTLRWFLFRCDVIFVMFFTIAAFIAVGTNQDRT
GEIGIIVALAMLILGTFQWAIITSINVDGLMRSVDRVFKFIDLASEETLQGKPGGKGGSD
LVINNLNAYGYWPNRGQLDVEGLSVRYTDAGRAVLNDISFSVEGGQSVGLLGRTGSGKST
LLSALLRLTYTEGEIYIDGVSSSSMPIQTWRKAFGVVPQKVFILTGTFRMNLDPYGRYSD
DELWRVAEEVGLKSVIEQFPERLDFELKDGGSVLSNGHKQLVCLARSILSKARILLLDEP
SSYLDPITLQVLRKTLKQSFSDCTVILSEHRVEPLLECQSFLMIEKSSVKSYDSIQKLMN
EMSHLKQAISPADRLRLFPGPHRLNSIKRPQPQTIKISSLPEEAEDEIQDTRL
NT seq
4482 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagtcaccggtggaagatgcgaacttcctctctaagtttgtcttttggtggata
tcaccactattgaggaaaggtttcactaaaaagttggagctgaccgatgtgtataaggtt
ccttcttttgatctggcagacaccctctctgagagacttgaaagggaatgggacaaagag
gtggtgttggccaaaggcaggcccaggcttctgaaagcactagcccgatgcttcttcctc
ccatttgccttctttggggtcctcctctacttcggggaggcatccaaggctgtgcagcct
caactttcaggtcgcatcattgcttcctttgacccagtacatgctcctgagcgaagtcag
ggatactacttggccctggggcttggcctcctcttcaccgctcgcttcatgctattgcag
cctgccctctatggcctgcatcaccttggcatgcagattcgcattgcccttttcagcctt
atatacaaaaagacactcaagctatccagtagggtcttggataagatcagcaccgggcag
ctagtcagtctgatgtctgcccacctcaacaagctggatgagagcctaggtctagcacac
tttgtatggatcacacctctgcagtgtattttgtgtactggtttgatctgggagctgatt
gaggtgaacggcttctgtgccctggcagccctgactcttcttggcattctccaagcttgg
ctctccctgaagatgggacctccccgggcaaagcgtgccgggctgataaaccgacgtctg
gctcttacttctgagattgtggagaatattcactctgtcaaggcgtatggctgggaggaa
gtaatggaaactatcatcaaaaacattagacaggatgaaatgactctaaccagaaagatt
ggctctctgcggtatttctatagtgcatcatactttttctctgccatattggttatcata
tcagccattgtgccatacgcaatcagtaatggcattatactgcggcgaattttcaccaca
gcgtcatactgtgtagtgttacgtatgacactcacccgacagctgccgggctccatccag
atgtggtatgacaccttgggactggtccagaagatcgaggatttcctgctaaaggaagaa
tacaaagtaatggattatagcttgaccacagttggactagagatgatcaatgtttcagca
tcctgggatgaggggattgttgagctctttgagaagatcaagcgggagaacaaagcaaat
ggacacctgactggtgatgatggactgttcttcactaatttgtatgtcacacctgtcctc
aaaagcatcaacctacgtttagagaagggcatgatgctcgcagtggctggatctactggg
tcaggaaagagttccctgctcatgatgatcctgggggagttggtgccatcagacggtaaa
attaaacacagtggccgggtttcgtattcaccacaaacttcctggataatgccagggacc
atacgtgacaacatccttttcgggctgacttatgacgaatatcgctacacttctattatt
agggcctgccagctggaagaggattttgacctgctgcctgacaaagataagacacccatt
gctgaaggaggagttaccctgagtggcggtcaaagggcaaggatctgcctcgccagggcc
gtatataaagatgcagacctgtacctgctagatgcacctttcacccacctggacattgca
acagagaaagagatctttgacaaatgtgtctgtaaactaatggcctccaagactcgtgtt
gtggtcacatgcaagttggagcatctcaaacgggcggacagaataattctgttgcacaac
ggagactgctacttctatggcaccttctcagaactacaagcacagaggccagacttcagc
tccctcctgcttggaattgaagcttacgacaacatcactgcagagcggcgtggctctatc
ctcacagaaacacttcgcagagtctcagtggatgaaactgcttgtttccgaggcccagac
gccaatcgtcagtccttctgccatgcaccatctcacagccatgctatgggtgatggatat
cctgaaaaacgcaagccatcactcatccttaaccctcttgtagctgcccgcaaattctca
aatactttccaatccacaactatggaagatggagtacatgaacattcagagagaagattc
tctgtagtacctgaggatgatcaggtagaagaggtgcttccacggagtaacctgtatcac
catgggttacagcaccttaacgggcggcgccagtctgttctggcgttcatcaccaacgct
cagggtcaggagcgcagagagcagatgcagtcttccttcagaaaaaagctgtccatcacc
ccacagtgtaacttggcctccgaactggacatctatgcccgacgcttgtctaaggacagt
gtttttgacattagtgaggaaatggatgaagaatacatggaagaatgctttgcagatgag
cgtgaaaacatcttcgaaactacctcatggagtacttacctacgctatgtttccaccaat
aggagtttaatctatgtcctaattttcattgtgtttatctttgccattgaggttggtggt
tgtgtcgttggcatttttctcattactgacgtgatatggaaggatggcgccaaccctagt
tcacccaaccacattgatgagaagcaccctaatgcctcatcgactcctgttcgcctcata
gtcacaaaaaacagcgcttactacatcctctacatattctttgctcactcggatagcata
ctggcccttggagtttttaggggtctccctttagtccacacattgctcactgtgtctaaa
agactgcacgaacagatgctcagctctgtgctacgggcccctttgtctgtgctcaacacc
atgaaaacagggcggataatgaacagattcaccaaggacatggccgtcatagatgacatg
ctacctctagtgctttttgacctcatacagttaactttacttgtcatcgggtgcatcttc
acggtgtctatcatgagaccatacatcttcatatctgcaataccgctggctattgtcttt
gtggtcatcaggaagtacttcttacgaactggacaacaactcaaacaactagaggctgaa
gctcgtagtcccatcttctctcacctcatcatctcactaaagggtttatggacaattcga
gcatttggacgtcagacttactttgagacactcttccacaaagctcttaacacccacaca
gccacctggttccactacctgtccacattaagatggttcctgttccgctgtgatgtgatc
tttgtgatgttcttcaccatcgctgccttcattgctgtaggaaccaaccaggacagaacg
ggcgagattggcatcattgtggccctagctatgctcatcctgggcactttccaatgggct
atcatcactagtatcaatgtggacggtctgatgcgctcagtggatcgagtgttcaaattc
atcgacttggcatcagaagagacattgcagggaaaaccaggagggaaaggaggttctgac
cttgtcatcaacaacttaaatgcatacggctactggcctaaccgtggccagctggacgtc
gagggcctctctgttagatacacagatgctgggcgggctgtgctcaatgatatctccttc
tctgtggagggtggtcagagtgtgggcctgctgggtcgaacaggttctgggaagagcacc
ctgctgtccgctctgctgcgcctcacctacactgaaggtgaaatatatattgacggtgtt
tcctcaagctccatgcccatacaaacatggaggaaagcctttggagtggtcccacagaaa
gtctttattctgactggaactttccggatgaacctggacccatacgggcgttacagtgat
gatgagctatggcgggtggctgaagaggttggtttaaagtccgtcattgagcagtttcca
gaaaggttggactttgaactgaaggacggaggtagtgtgctgagtaacggccacaaacag
ctggtgtgtctcgcccgctccatcctcagcaaggcccgcatcctgctcctggatgagcct
tcctcctacctggaccccataacactgcaggtcctgagaaagacgttgaagcagtcgttc
tctgactgcaccgtcatcctatccgaacacagagtggagccactgttggagtgtcagtca
ttcctgatgattgagaagagctctgtgaaaagctatgactccattcagaaactcatgaat
gaaatgagtcacctgaaacaggccatcagccctgctgaccggctccgcctcttcccggga
cctcaccgtctgaactccatcaaaaggccacaaccacagaccatcaagatctcatccctg
ccagaggaagctgaggatgaaatccaggacactcgactttaa
DBGET
integrated database retrieval system
