Girardinichthys multiradiatus (darkedged splitfin): 124858362
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Entry
124858362 CDS
T08099
Symbol
nphp3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gmu03037
]
124858362 (nphp3)
Cilium and associated proteins [BR:
gmu03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
124858362 (nphp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
NPHP3_N
TPR_14
TPR_19
AAA_16
NACHT
TPR_11
KAP_NTPase
AAA_22
TPR_6
ATPase_2
DUF2225
Uso1_p115_C
ARM_TT21_4th
AAA_19
XRCC4_CC
IFP_35_N
Motif
Other DBs
NCBI-GeneID:
124858362
NCBI-ProteinID:
XP_047206334
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All DBs
Position
21:complement(27042603..27062008)
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AA seq
1301 aa
AA seq
DB search
MGTASSLVSPGEVIEDGYGGERGEACEIPVEVKPKARLLRSSFRRGPRVIGASFKSTGSV
DLEYAAEYERLRKEYEIFRVSKNNEITSMQKKEAKLDEENKRLRAELQALQKTYQKILRE
KEAALEAKYQAMERAATFEHDRDKVKRQFKIFRETKEKEIQDLLRAKRDLEAKLQQLQTQ
GIHIFGPNDSDSDDNQTTVTAVGTQCEYWTGGVLGSEPSMGSMMQLQQTFRGPEFAHSLI
DVEGPFANVSRDDWDAAVASLLQVSPHVPQALWSNTVRCYLISTQDTKAELDIFKKHSSV
LRRMCESLGHFYLNVYFPEEDAASYATVRKQEIERSSVCVLLLKSTVTSSVVEDCEEAFV
KNPDGHPLVLYLRTEEDNSLTGPIRQLLERVNAADQAAKVKVVDHSSSAEEGAKLIYTQL
EKVIKQELLGSEGADDDSKDSAIDEGREEDLGDVLWDLHDEQEQIESYQQACSSTTSHLG
FQKYIDRLNDMIAAPPPTPPLLVSGGPGSGKSLLLSKWIELQQKQSPSTLFLYHFVGRPL
SISSEPVVIIKRLTVKLLQHFWSISGLSMDPSKILEEFPRWLERLSARHQGNIIIIIDSI
DQIQQAERHMKWLIDPLPVNVRVVVSVNVETCPEAWRLWPTLHLDPLSPREVKNVVSAEC
QAADLRLTKDQEKKLERHCRSASTCNALYVTLLARMITSLRSGWSLEKSLEQCLQCQDTL
SLYRLALKMILKFLNTDREKHIMKEMLCLVFSSHNGVSESEALDLFPELEWPALSSLLYH
LNRVCIVTLRCGLIRFEHMQACEAVRLEFLGGGSGCASYRDKLIHYFNQQLSQDCVTWRV
ADELPWLLQQQEDKTKLQLSLLNLFVSQNLYKRGHFSELLAYWQYVGKDKSSMATEYFDS
LKRYEKSCESEDGMTKLANLYETLGRFLKDLGLPSQAVAPLQRSLEIRETALDPDHPSVA
RSLHQLAGVYVQWKKYGNAEQLYKQALEISENAYGAEHVTVAQELESLAMLYQKQNKYEQ
AEKLRKRSVRIRQKTARQKGHMYGFTLLRRKALQLEELTLGKDSADCAKTLNELGVLYYL
QNNLDAAKVFLTRSLEMRQCVLGPDHPDCAQSLNNLAALHTERREYETAEDMYERALEIR
RKALSPDHPSLAYTLKHLAMLYKRRGKLEKAVPLYVLSLEIREKSFGPKHPSVATALVNL
AVLYCQLKKHSEALPLYERALKVYEDSLGRSHPRVGETLKNLAVLSYEKGDFERAAELYK
CAMEIKEAEPSLLCGNAPSYHSSSGDTFSLKTPASLPHAAR
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgcatcctctttggtcagcccaggagaggtgattgaggatggatatggcggt
gagagaggggaagcctgtgagatacccgttgaggttaagcccaaagcccgactccttcgc
agctccttccgccgcggacctcgggttatcggggccagtttcaaatccacggggtccgtg
gatctggagtatgcagcggagtatgagagactccgtaaggagtatgaaatctttcgcgtc
agcaagaataacgagatcacatccatgcagaagaaggaggccaagctggacgaggagaac
aagaggctaagagctgagttgcaggctcttcagaaaacctaccagaagattctcagagag
aaagaggctgctcttgaggcgaagtaccaagctatggagagggctgccacttttgagcat
gacagggacaaagtaaaacggcagtttaagattttccgtgagacaaaagagaaagagata
caagatctgctgcgtgcaaagagggatctcgaggccaaattgcagcagttgcagactcag
ggtatccacatttttggtcccaatgactctgactcagatgataaccaaaccactgtgacg
gctgtaggaactcagtgtgaatactggactggtggtgtgctgggaagtgagccctctatg
ggtagcatgatgcagctgcaacagacattcagaggacctgagtttgcacacagtttaata
gatgtggaaggaccctttgcaaatgttagcagagatgactgggatgctgcagtggccagt
ctactccaggtgtcacctcatgtgccccaggccttatggagtaacactgtgcgctgctac
ctaatctccacacaagataccaaagctgagctggatatctttaagaaacactcttcagtg
ctacggagaatgtgtgagagcctgggccatttctacctaaacgtttactttccagaggag
gacgctgcttcatacgccacggtgcgaaagcaggagatcgagcggagttcggtgtgtgtg
ctccttctcaaatccaccgtcacaagctctgtggttgaagactgtgaggaggcttttgtt
aagaacccggatggacatccattggtgctgtaccttaggactgaagaggacaacagtttg
actgggcccatcaggcagctgttggaaagggttaatgcagcagaccaggctgccaaagtc
aaggtggtggatcacagcagctctgcagaggaaggggctaagctgatttatactcaacta
gagaaggtcatcaagcaggaattgttgggttctgaaggagcagatgatgactcaaaggac
tctgccatagacgaggggcgtgaggaagacttgggagacgtgctttgggacctacatgac
gaacaggagcagattgagtcctaccagcaggcttgcagcagcaccacctcccatttaggc
ttccaaaagtatatagaccgtttaaacgacatgatagctgccccccctcccacaccgcct
ctgctggtgtctgggggtccgggttcaggaaagtctctcttgctttccaaatggattgag
ctgcagcagaagcaatcccccagcactttgttcctttatcatttcgtcggccgcccactt
tccataagctcggagccagttgtcattatcaaacgcctcacagtaaagttgctgcagcac
ttttggtccatttctggtttatccatggatcccagtaagattttggaagagtttcctcgc
tggctggagagactatctgcacggcatcaaggaaatatcatcatcattattgactcaatt
gaccaaatacagcaagcagaaaggcacatgaagtggctgattgaccctcttcctgtcaat
gtcagagtggtcgtatctgtcaatgtagagacgtgtcctgaggcttggaggttgtggccc
acacttcatttggacccactcagtcccagagaagtcaagaatgtagtcagtgcagagtgt
caggccgcggatctcagactcaccaaggatcaggagaaaaagctggaaaggcactgtcgc
tccgcatcgacatgcaacgcgttatatgtcacactgttggcaaggatgatcaccagctta
agatctggctggtccttggagaagagcctggaacagtgtctgcagtgtcaggacaccttg
tccctctatcgcctggcactaaaaatgatcttaaaattcctcaacacagacagagagaag
cacatcatgaaagagatgctgtgccttgtattttccagccacaatggagttagtgaatca
gaggcgttagatcttttcccagagctagagtggcctgctctgtcttctctgctctaccac
ctgaacagggtctgcattgtgacgctccgctgtggactcatcaggtttgagcacatgcag
gcttgtgaagctgtgaggctggagttcctaggtggaggaagtggctgtgcttcttacaga
gataaactaatccattacttcaatcagcagctcagccaggactgcgtcacatggcgggtt
gcagatgagctcccctggctgctccaacagcaggaggacaaaactaaacttcagctcagc
cttttgaacctgtttgtctcccaaaacctttacaagaggggtcatttctctgaactgctg
gcctattggcagtatgtgggcaaagacaaaagctccatggcaactgaatactttgactcc
ctaaaacgttacgagaagagctgtgagagtgaagacggtatgaccaaacttgcaaacctt
tatgagactttaggtcgctttctcaaagacctgggccttccaagtcaggctgttgcccct
ttacaaaggtctcttgagatcagagagacggccctggacccagaccatcccagcgttgca
cgctctctgcaccagctggctggggtttatgtccagtggaagaagtatgggaacgctgaa
cagctgtacaagcaagctcttgagataagcgagaacgcctacggcgccgagcatgttact
gtggcacaagagctggagtcactcgctatgctctatcagaagcaaaacaagtatgaacaa
gctgagaaactccggaagaggtcggtaaggattcgacaaaagacagcgcgacaaaaaggt
cacatgtatggcttcactttgttgaggcgtaaagccctccagctggaggagctgaccctg
gggaaggactctgcagactgtgctaagacactcaacgaactgggtgtcctttactacctc
caaaacaacctggatgctgccaaggtgttcctgacccgttctctggagatgcgccaatgc
gtccttggtccggatcacccagactgcgctcagtctctcaacaacctggccgcgctccac
acagaaaggagggagtacgaaactgctgaggacatgtacgagagggcgctggagatccgc
aggaaagccctgtcaccagaccacccttctctggcatacactctcaagcacttggccatg
ctctataaacgcagaggcaagctggagaaggccgttccactttatgtgctttcattggaa
atcagggaaaaaagttttggtcccaaacacccgagtgtggccacagcactggtgaacctc
gctgtactctactgccagctgaagaagcacagtgaggccttgccactttatgaacgagca
ctgaaagtctatgaagatagtttgggccgctcacatccacgagttggagaaaccctgaaa
aaccttgctgtgctaagttatgagaaaggtgactttgagagggcggcagagctttataag
tgtgcgatggagattaaagaagcagagccatcattgttgtgtggcaacgcaccatcatac
cattcctccagcggagacacgttcagtctgaaaacaccggcttccctaccacatgctgcg
aggtga
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integrated database retrieval system
