Girardinichthys multiradiatus (darkedged splitfin): 124858403
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Entry
124858403 CDS
T08099
Symbol
shha
Name
(RefSeq) sonic hedgehog protein A isoform X1
KO
K11988
sonic hedgehog
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
124858403 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gmu01002
]
124858403 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gmu00536
]
124858403 (shha)
Peptidases and inhibitors [BR:
gmu01002
]
Cysteine peptidases
Family C46: hedgehog family
124858403 (shha)
Glycosaminoglycan binding proteins [BR:
gmu00536
]
Heparan sulfate / Heparin
Morphogens
124858403 (shha)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Intein_splicing
DrmE_C
Peptidase_M15_3
Vint
Hint_2
VldE
DHQS_2nd
MjaV
Motif
Other DBs
NCBI-GeneID:
124858403
NCBI-ProteinID:
XP_047206380
LinkDB
All DBs
Position
21:complement(27775581..27794121)
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AA seq
411 aa
AA seq
DB search
MHPRWTRIASVVLICLSLVSSAVGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGAS
GRYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRMMTQRCKDKLNSLAISVMNQWPG
VKLRVTEGWDEDGHHFDESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKA
HIHCSVKAENSVAAKSGGCFPGSSAVTLQDGTKMAVKDLQPGDRVLAADGDGNPVYTDFI
MFIDRDSTTRRTFYVIETEAGQKITLTAAHLIFVGSENSTRSAVFASDVRPGQKVFVNHG
ERGRLVAVNVKRIYTQQHEGSFAPVTAQGTVVVDQVLASCYAVIEDHQLAHWALAPVRIA
HWVSSSLFISRPRVSAHSEGVHWYSKLLYQLGTWLLDDHSIHPLGMSAYPS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcatccgcgctggaccagaatcgcttctgtcgttctcatctgcttgtccttggtgtcc
tccgcggtgggatgcggaccgggcaggggctacggcaggaggagacaccccaagaagctg
acacctctggcgtacaagcagttcatccccaacgtggcggagaagaccctgggggcgagc
ggcagatacgagggcaagatcacacggaactccgagcgctttaaagagctcactcccaat
tataacacagacatcatcttcaaggatgaggagaacacgggagccgacaggatgatgact
cagaggtgcaaagacaagctgaactcgctggccatctctgtgatgaaccagtggcccggg
gtaaagctccgggtcacagagggctgggatgaggacgggcaccacttcgacgagtccctg
cactatgaaggcagggctgtggacatcaccacctctgacagagacaagagcaaatacggc
acactgtccaggctggccgtggaagctggatttgattgggtctactatgagtcaaaggcc
cacatccactgctctgtgaaagcagaaaactcagtggcagcaaagtcgggcggctgcttc
ccgggctcctccgcagtcaccctgcaggacggcaccaagatggcggtcaaagacctccaa
cctggagacagggtcctggcggcggacggcgacgggaatccggtctacaccgacttcatc
atgttcatagaccgagactccaccaccaggaggaccttctacgttatcgagaccgaagcg
ggccagaagatcaccctcaccgccgcgcatctcatcttcgtcggaagcgagaactccacg
cggtcggcggtgttcgccagcgacgtgcgacccggacagaaggtgttcgtcaaccacggg
gaacggggtcgactcgtggccgtgaacgtgaaacggatttacacgcaacagcacgagggc
tccttcgcgcccgtgacggcgcaggggaccgtggtggtggaccaggtcctggcgtcctgt
tacgcggtgatcgaggaccaccagctggcgcactgggccctggcgcccgtcaggatcgcc
cactgggtgtcctcgtcgctgtttatctcccggcctcgggtcagcgcgcacagcgagggg
gtgcactggtactccaaactcctttaccagctggggacgtggctcttggacgaccactcg
atccatccactggggatgtcagcatatccaagctga
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