Girardinichthys multiradiatus (darkedged splitfin): 124858799
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Entry
124858799 CDS
T08099
Symbol
nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04010
MAPK signaling pathway
gmu04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124858799 (nfkb2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
124858799 (nfkb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmu03000
]
124858799 (nfkb2)
Transcription factors [BR:
gmu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
124858799 (nfkb2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Death
CIS_TMP
Motif
Other DBs
NCBI-GeneID:
124858799
NCBI-ProteinID:
XP_047206972
LinkDB
All DBs
Position
22:44776454..44794741
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AA seq
894 aa
AA seq
DB search
MAGALRMTEPQFMNYDNDVLPNFMHYDFIPPMDIKTEPYIPETAHGPYIQIIEEPKQRGF
RFRYECEGPSHGGLPGASSEKNRRTYPTVKINNYVGHARVEVQLVTHTDPPRVHAHSLVG
RHCNENGTCMLDIGPNDLTASFSNLGILHVTKKGVVEVLTRRLREERRRQKGTHCPLTDS
EESSILKEAKELGKIMDLNIVRLRFTAYLQDSNGGFTRALKPVVSNPIYDSKSPNASNLK
ISRMDKTCGSVLGGDEIFLLCDKVQKDDIEIRFYEEDDEGCWEAFGDFSPTDVHKQYAIV
FKTPPYHSAEIDRPVTVFLQLRRKKAGDSSDPKQFTYIPQVQDKEEVLRKKQKPLPHYDS
WRGGGRGRDGGAGTGGFGGAAGGGAGFQFQQMNGGTGGGAFYTGGFTGFTSGGGAQMSAS
APQTGVSQQQGEGQPGPLQQQLLRIAASLSNRVSQSARQTAAALLQYCSTGDPRVLLALQ
RHLCGIQDANGDTPLHLAIIHQQTSVIQQLIQTLLSSQQHAVLNTSNHLQQTPLHLAVIT
RQLKVTEVLLRAGADPTLVDKDGRSPLHLAALAGDTAMLRLLLAHLGERHAHLVNMPDYH
GLQPLHLAVRRDGERCLRLLVEGGAKINAPEQKSGNTALHLAVKENLFKVACMLITELKA
DFNACTFGGNTPLHLAASLGSPTLCSMLIAAGADKNLENDEPLFFSSSSDEEQEQEDPIR
KRDDNTQPISNRKRPAGGHTPLDLATCQKVKNLLTTRQSPKLNRHVDKKIRTNSSEDPER
SGLDEDTLTRLVEVLSVGDVPWMKLAEKLGMMTLTHLYQDSPTPCQHLLQHYKLGGGPVE
GLVEALQSLGLTEGVRLLRNTELQDDKHSSDATVDSGFSSQPMEEQQEEEMTNQ
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggctggagctctgaggatgactgaaccgcagttcatgaactacgacaacgacgtgtta
ccaaattttatgcactatgacttcattcctccgatggacataaagactgagccctacata
cctgagacagctcatggtccgtatattcagatcatcgaggagcccaaacagagggggttc
cgtttccgttatgagtgtgagggtccatcccacggcgggctcccaggggcctccagtgag
aagaaccggagaacctatccaactgtgaagatcaacaactatgtgggccacgcccgggtg
gaggtccagctggtgacccacaccgacccgccccgggtccacgcccacagcctggtggga
cgccactgcaacgagaacggcacgtgcatgctggacatcggccctaatgacctcaccgcc
tcgttcagcaacctggggatcctccacgtgaccaagaagggcgtggtcgaggttttaacc
agaaggctgagggaggagaggaggagacagaaaggaacccactgtcctctgacagactct
gaggagtcgtccatcctgaaggaggccaaggagctcgggaagatcatggacctgaacatc
gtccgactgcgtttcactgcctacctgcaggacagcaatggaggcttcaccagagccctg
aaacctgtggtgtccaaccccatctacgacagcaagtctccaaacgcctccaacctgaag
atctcccgcatggataagacatgcggttctgtgcttggaggagacgagatcttcctgctg
tgtgacaaggtgcagaaagatgacatcgagatccggttctacgaggaggatgacgaggga
tgctgggaggcgttcggggacttttctcctactgatgttcacaaacagtacgccatcgtg
ttcaaaacgccgccctaccacagcgcagagatcgaccgacccgtcactgtcttcctgcag
ctgaggaggaagaaggccggcgacagcagcgaccccaaacagttcacctacatccctcag
gtccaagacaaagaagaggttctgaggaagaagcagaaaccgctgccccactacgattcc
tggagaggagggggaagaggaagagatggaggagcaggaactggagggttcggaggagct
gcaggaggaggagcaggtttccagttccagcagatgaacgggggaacaggaggtggagct
ttctacacaggaggctttacagggtttacctcagggggaggagctcagatgtcagcctcc
gcccctcagacaggtgtgtctcagcagcagggtgagggtcagccgggccctctgcagcag
cagctgcttcggatcgccgcctccctcagtaaccgagtctctcagagcgcccggcagacc
gccgccgccctgctgcagtactgcagcactggagatccccgagtcctcctcgccctgcag
agacacctgtgtggcattcaggacgccaacggagacacaccgctgcacctggccatcatc
caccagcagacctccgtgatccagcagctgatccagactctgctgagcagccaacagcat
gccgtcctgaacacgtccaaccacctgcagcagacccccctgcacctggcggtgatcaca
cggcagctgaaggtgacggaggtgttgctgagggcaggggccgaccccaccctcgtggac
aaagatggccgcagcccgcttcacctggcagcactggctggagacactgccatgctccgc
ctactgctggctcacctgggagaacgccacgcccacctggtgaacatgcccgactaccac
ggtctgcagccgctgcacctggccgtcaggagggatggagagcgctgcctccgcctgctg
gtggagggcggggccaaaataaacgccccggagcagaagagcggaaacacggcgctgcac
ctagccgtcaaagagaacctgttcaaagtggcgtgtatgctcatcacagagctgaaggct
gactttaatgcctgcacgtttggaggaaacacgccgctccacctggcagccagcctgggc
tcgccgacgctctgctccatgctgatcgctgcaggtgctgataagaacctggagaacgat
gagccgctcttcttcagctcctcctcagacgaggaacaggagcaggaagacccaatcaga
aagcgagacgacaacacacagccaatcagcaatcgcaagagaccagcaggaggacacacc
cctctagatctggctacctgtcagaaggtgaagaacctgctgaccacccggcagagtcca
aagctgaaccgtcacgtggataagaagatcaggacgaacagcagtgaagacccagagcgt
tcgggcctggacgaagacacactgacccggctagtggaggtgctaagtgttggagacgtt
ccctggatgaagctggcggagaagctaggaatgatgacgctgacccacctgtaccaggac
agtcccacgccctgccagcacctgctgcagcactacaagctgggtggaggtcctgttgaa
ggtctggttgaagctctgcagtctctgggtctgacagaaggagtccgactgctgaggaac
acagagctacaagacgacaaacacagctcagatgccacagtcgacagcggcttcagcagc
caaccaatggaggagcagcaggaggaggagatgaccaatcagtga
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