Girardinichthys multiradiatus (darkedged splitfin): 124858874
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Entry
124858874 CDS
T08099
Symbol
tarbp1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gmu03016
]
124858874 (tarbp1)
03036 Chromosome and associated proteins [BR:
gmu03036
]
124858874 (tarbp1)
Enzymes [BR:
gmu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
124858874 (tarbp1)
Transfer RNA biogenesis [BR:
gmu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
124858874 (tarbp1)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
124858874 (tarbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
124858874
NCBI-ProteinID:
XP_047207135
LinkDB
All DBs
Position
22:29628097..29647751
Genome browser
AA seq
1625 aa
AA seq
DB search
MYPTLINAVLSSSPDYDLLFESLCWPQESWPQTEQVEALTALVEALGPFLIDSNLAPTLL
TGANRSCIRDKIESVIWSKCLPFLWRISAESGGDARCRESTAAVCRLLAVCVGVCGENVR
TKVVSSILPSLPRIWEELLAPGTLSVQVATEVLAALMPLITADEDLTLDTLNCALSSIRS
LPDDLVSKVMVRIILTLLNCCIDAKSSSILKRLLDDVCNWHSTEPTPVVTERTLLCLTVL
SDHLLKSHSTTSYRSRETDPRLCPEFWRIVQEGLTHRDSVSRKRALYLLKRCAALSEEEG
FVAHSSTSEEDETLFKWAPNKSRLLREFWEDYTLVMETLEENQVHVVRPVLNRIDTLIQA
TVTDGQGSGLFHPSWLLCVYQRMFHSENKSLMREGVCHLLELQVLQQQDFAVPFSQFVAG
SFMNVLSETSLFCRSPGQSVGDCPELAVKLQVFLVTFFTSLPSEDRGCVLLQLIQQLGCK
HWCAVPLLFVCQALSKLPPSPLLRLSGLSALREVLRCTMITHQVLLRGAAQCFLLNSALH
LTDVSEVTRDDMFSFLMHFREDESLCRGTELWNEVCTWLLEHECSFKSRILDGDCTEDPT
QKETTRAYVQQEVLAYLRVPASTGQAERLPDSREADKLARAILLCVDMERRRTREKTSET
LRSLLSPLLDTLSRVYTNIYLPVRKSDKSLQLMLRLLQLSTSPCGQQQEDDVIFAIERAF
LKLVDPVQDFILRRLCGELQELFDIERAELYLSVLRQLVVMCSSPSGCSKNIQQYAFPKL
IKYSLSCLLEPTQQIPSVANQVSKAVCMASLAAVSGVLQQGGIGMRSETVSALKSLNDYF
YTLRTSSQSQSSLANINKCLMKPQLLNSSSDLEAQGLLQQDWGRIAANFLRDQWICLNFL
IRTVGVPEFVEISKVSETLGAALSHSVEALSLLPSDLVLPVLNFMNMTLPQLVHDEEDLC
VQAVTLSWELVQGLSTNAHDFWPALKDFISMAFQHKLLKLTHHQAPTLTTALKKIFTELL
ELSQSKSGVFGMLLQHCCQTWLPNEQGCSEQAVAAFSSVFNNLDIVTEACVYGPVFRRDQ
RLVQDVQIYVEQLGEKCAANVAVANDNRDDQLPRTCVLNFLCHLDPSIQQHQRLIEELVI
ELLRKDSLISKSKVRYYSNSLQHRVKNRAWQTLLLLLPKLREEFVATLLNHVFEAGFCSN
QASVKYLIEWMMILILVKYPHHIDRFWTCFNLDQEKTKTSICTFLSVLVHFSIIIPHVEN
KVGQLRKALDIILQSCFNHNFSVRLYALLALKRVWSLTEGLTVEKEEAEAFRGLSSVVTA
CLNQAEALQSTGNANKNWLRIQGHFFFSAFHPIRDYSVETIFYTFPSLSELVDDEWIPPW
KFEKLSFFSESLSVPLRNSAPVLGQLQPGDWVQQDRSEQDKEERWTEVQKKITPWRLGVH
EQEPELKLVPAQRAARLGKQHGTLLVVASLIDKPTNLGGLCRTCEIFGASGLVLDSLHHL
SDKHFQSLSVSSELWLPLLEVKPVELTDFLQLKKSEGYCIVGVEQTANSQNLQDFRFPER
TLLLLGNEREGIPANLLQMLDVCVEIPQQGIIRSLNVHVSAALLIWEYTRQHLVTGSNKV
DSQSS
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgtatcccactctgattaacgcggttctgagcagctctcctgattacgatcttttgttt
gaatctttgtgctggccgcaggagtcgtggccacaaaccgagcaggtcgaggcgctcacg
gctctcgtagaagcactgggaccatttctgatcgactcgaatttagctccgactctactg
acaggtgcaaacagaagttgcattcgcgacaaaatcgagtcagtcatttggtcgaaatgt
ttgcctttcctctggagaatatcggcagaatctgggggtgatgcgcgctgcagggaaagc
accgccgctgtctgcagattgctcgctgtctgtgtcggtgtgtgcggcgaaaacgtcagg
acaaaagtcgtttcatccatcctgccgtcgttaccacggatttgggaggagctgcttgcc
ccagggactctcagtgtgcaggttgctacagaagtccttgcagctctcatgcctcttatt
acagcggatgaagatctcacactcgacactttaaactgtgcattgtcctctatccgatcg
ctccccgatgacctggtatccaaagttatggtcaggatcattttgactttgctcaactgc
tgcattgatgcgaagtccagcagcatcctcaagcgcctcctagatgatgtttgcaactgg
cactccacggagcccacaccggtggtcacagagcggacgctgctgtgtttgaccgtccta
tcagaccaccttttgaaatctcacagcaccacatcctaccggtcccgtgagaccgaccca
cgtctgtgtcctgagttctggagaattgttcaggaaggactgactcatagggacagtgtg
tcacgcaagagggcactgtacctgttgaagagatgcgcagcgctttccgaagaggagggc
tttgttgcccattcttctacatcagaggaagatgagacattgttcaaatgggctcccaac
aaaagcaggctgcttagagagttctgggaggattacaccctggtgatggagactctggag
gagaatcaggttcatgtcgttcgtccagttttaaacagaattgacacattgatccaagca
acagtgactgatggtcaaggctcaggcctcttccacccctcctggctgctgtgtgtgtac
cagcgcatgttccacagtgagaataaatccttaatgagagaaggggtgtgccatttgctt
gagctccaggttcttcagcagcaggactttgcagtgcccttttctcagtttgtcgccggt
tccttcatgaatgttctatctgaaacatcccttttctgtagatcaccagggcagagtgta
ggagactgtcctgagctggcagttaaacttcaagtcttcctggtcactttcttcacgagc
cttccatcagaggacagaggttgtgtattgcttcagctgattcagcagcttggctgcaaa
cactggtgtgcagtgcccctcctcttcgtctgtcaggctctgtctaaacttcccccaagt
cctctgctgaggctaagcgggctctctgctctacgggaggtgctgcgctgcacaatgatc
actcaccaggtgctgctgagaggagctgcacagtgttttttacttaacagcgccctccat
ctaacagatgtgagcgaagtgaccagagatgatatgtttagtttcctgatgcactttcgt
gaagatgagtctttgtgtagagggacagagctatggaatgaggtgtgcacctggttattg
gaacatgaatgcagtttcaagtctagaattttggatggcgattgcaccgaagaccccaca
caaaaagaaaccacaagagcttacgttcaacaggaggtacttgcttatcttcgtgttcca
gcaagcacaggtcaggcagaaaggttacctgactctagagaggctgataagctggccagg
gccattctgctgtgtgtggacatggagaggaggcgaaccagagaaaaaaccagtgaaact
ctgaggtcacttctgtctccactactggacaccctaagtagagtctacaccaatatttac
ctacctgtccgtaagagtgacaagagtctgcagctcatgcttagactgttgcagctcagc
acaagtccatgtggtcagcaacaagaggatgatgtaatatttgctattgaacgagccttt
ctgaaacttgtcgatccagtccaggattttatcctcaggaggctgtgtggggagctgcag
gagctctttgacattgaacgggccgagctgtatctctctgtcctgaggcagctggttgtt
atgtgcagctctccatctgggtgctccaagaacattcaacagtatgctttccctaaactc
atcaagtacagcctttcatgcttgcttgagccaacccaacagatcccgtcggtggcaaac
caggtgtctaaggcggtttgtatggcgtctttggctgctgtgtctggtgtcttgcagcag
ggaggaattggcatgcgatcagagactgtttctgccctgaagtccctgaatgattatttc
tacactttaaggacttcctcacaatctcagtcatctctcgcaaacattaataaatgcttg
atgaaaccacagctattaaatagctcaagtgacctcgaagcccaaggccttctgcaacag
gactggggacgcattgctgccaacttcttgcgggaccagtggatatgtctaaactttctg
attaggactgtaggggttcctgagtttgtagaaatttccaaagtatccgagaccctcgga
gctgctctgagtcacagtgttgaggccttgtctctgctgcccagtgaccttgtgctgccc
gtactaaactttatgaacatgactctgccacaattggtgcacgatgaggaggatctctgt
gtgcaggcggtgactctgagttgggagcttgtacaggggcttagcaccaatgctcatgat
ttctggccagccttaaaagactttatctccatggccttccaacataaactcctgaagctg
acgcatcatcaggctccaactctcacgactgcactgaaaaagattttcacagagttgttg
gaactgtctcagtcgaagagcggagtatttggcatgctacttcagcactgctgtcagaca
tggctgcccaatgagcaaggctgcagtgagcaggctgttgctgcgttttctagtgttttt
aacaacctggatatagtcactgaggcttgtgtatatggaccagtgttcaggagagatcaa
cgactcgtccaggacgtccaaatatatgtggagcaacttggtgaaaagtgtgccgctaat
gttgcagttgcaaatgataacagggatgatcagctgccccgcacttgtgtgctgaacttt
ctttgtcacctagatccatctattcagcagcaccaaagactcatcgaggagctagtgata
gagttgctgagaaaggacagcctcatatcaaagtctaaagtccgttactatagtaactcc
ctgcagcatcgggtcaaaaacagagcctggcaaacactgctgctgttacttcccaaactc
agagaggaatttgttgccactctcttgaaccatgtgtttgaagccggattttgcagcaac
caggcctcggtgaagtacctcattgaatggatgatgattctaatccttgtcaagtatcca
catcatatcgacagattctggacttgcttcaaccttgatcaggaaaagaccaagacaagt
atttgcaccttcctgtctgtcctggtacacttcagtatcatcattccacatgtagagaat
aaggtgggacagctgcgtaaagcactggacatcatcctgcagtcgtgtttcaaccacaac
ttcagcgtgcgcctgtacgccttacttgccctgaagagggtgtggagcctcacagaaggc
ctgacagtggagaaggaggaggctgaagctttcagaggactgtcctctgtggtgacagcc
tgtctgaaccaagctgaggccctgcagagcaccggaaatgctaacaagaactggctgagg
attcagggacactttttcttcagtgcctttcatcccatcagggattacagtgtggaaacc
atattctacacttttcctagtctgtcagagttagtcgatgatgagtggatcccgccctgg
aagtttgaaaagctgtcattcttttccgaaagtctttcagtccctttgaggaattctgct
cctgtcttgggccagctccagcccggagattgggtccagcaagaccgaagcgagcaagat
aaagaggagcgctggaccgaggtgcagaagaagatcacaccatggaggttaggggtccac
gagcaggaacccgaactaaagctggttccagcacagagggctgctcggctggggaaacag
catggtaccctgctggtggtggcctcgctgattgacaagcccaccaatttgggaggcctt
tgcagaacatgtgagatatttggggccagtggtctagttctggacagtctccaccatctt
agtgacaaacactttcagtccctgagcgtctcatctgagctttggcttcctttgttagag
gtgaagcctgtggagctcactgacttcctgcagctaaagaagagcgaaggttactgtatc
gtcggagtggagcagactgccaatagccagaacctccaggacttcaggttccctgagaga
actctactacttctgggcaacgagcgggaaggtattcctgccaatttgctccagatgttg
gatgtgtgcgtggagatccctcaacaagggatcatccgatccctcaacgtgcacgtcagt
gctgcgctgttgatctgggaatatacacggcagcaccttgtcaccggatcaaataaagtc
gactcacagtccagctga
DBGET
integrated database retrieval system
