Girardinichthys multiradiatus (darkedged splitfin): 124858891
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Entry
124858891 CDS
T08099
Name
(RefSeq) protein NLRC3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gmu04054
]
124858891
Pattern recognition receptors [BR:
gmu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
124858891
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
NOD2_WH
PRY
LRR_6
SPRY
AFG1_ATPase
LRR_4
Motif
Other DBs
NCBI-GeneID:
124858891
NCBI-ProteinID:
XP_047207171
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All DBs
Position
22:43063303..43088521
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AA seq
1136 aa
AA seq
DB search
MDQCEDRDEGVPPSKTTLCGKHESQSKGQRNHQRLKPELDLSCVSIKSDLSKDLPLKFKP
APPSVTERIHQRLKPEPEPSSLSFKSDLSKDLPLKFKLTGSPSSERVDKQSSEVPSGPSA
QQHQPQLDSIFMLLEDNIVTFVKKELKKIQKVLSPDDPECSESQRDDEEVLEGEDDEQRR
GSRELLLKITLNFLRRMKQEELADRLQSKHLAAICQHELKSGLKKRFQCVFEGIAKAGSP
TLLNQIYTELYITEGGTGEVNDEHEVRQIETASRKPHRPETTIRQEDIFKVPPGRDQPIR
TVMTKGVAGIGKTVLTQKFTLDWSEGEAHQNIQFIFPFTFRELNVLKDKKFSLVDLVHHF
FTETKEICSFEHFQVLFIFDGLDESRLPLDFHNKEILTITESTSVDVLLTNLIRGKLLPS
ALLWITTRPAAANQIPPECVGMVTEVRGFTDPQKKEYFRKRFSDKKKASRIISHMKTSRS
LHIMCHIPVFCWITATVLEDVLKTREAGKLPKTLTEMYIHFLVVQTKMKKVKYDGGAETD
PLWSPDSRKIIESLGKLAFDQLQKGNLIFYESDLIECGIDIRAASVYSGVFTQIFREERG
LYQDKVFCFVHLSVQEFLAALHVYLAFINSGVNLIGEKQKTFKISSFVQKKSKKKNLHQR
AVNKALQSPNGHLDLFLRFLLGLSLQTNQILLKGLLKQTRSSSQTDQKTVQYIKEKISEN
VSAEKNINLFHCLNELKDCSLVEEIQKSLSSGSLSTDKLSPAQWSALIFILLSSGEDLDV
FDLKKYSASEEVLLRLLPVVKASDKALLSGCNLSERSCGVMSSVLSSQSSSLRELDMSNN
NLQDSGVKLLSTGLESPNCKLETLSLSGCLISEEGCASLASALSSNPSHLKELDLSYNHP
GDSGVKLLSAGLKDPQWRLEALRVEPAGVRWLTPGLRKYSCQLTIDTNTVNRNLQLSEDN
RKVTHVEELQSYPDHPDRFDYRHPQLLCRTGLTGRCYWEVEWRGVVYLSVSYRRIRRRGG
SEDCMFGGNNQSWSLRCSDCHGYSVWHNNIKEPISSSSSSSISNRVAVYVDCPAGILSFY
RVSSDSLIHLHTFNTTFTEPLYPGFRLWFSGSSVFLSSVESKESPPVRETLSLLNR
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagatgagggagtccctccctctaaaaccactctgtgtggg
aaacatgagagccagagcaaaggtcagaggaaccatcagagactcaaacctgaacttgat
ctcagctgtgtgtccattaagagtgacttgtccaaggatcttcctcttaaatttaaacca
gcccctccttcagttacagagaggatccatcagagactcaaacctgaacctgaaccaagc
tctttgtcctttaagagtgacttgtccaaagatcttcctcttaaatttaaattgactgga
tctccatcctcagagagagttgacaagcagagctcagaggttcccagtggtccatctgcc
cagcagcatcaaccacagctggactccatatttatgctgctggaggacaacattgttact
tttgtgaagaaggagctgaaaaagatccaaaaggttctaagtccagatgacccagaatgc
tcagagagtcaaagagatgatgaggaggtattggaaggtgaagatgatgagcagaggagg
ggcagcagagagttattgttgaagatcacattgaacttcctgaggaggatgaagcaggag
gagctggctgaccgtctgcagagcaaacatcttgctgcaatttgtcaacatgaacttaaa
tctggtctgaagaagaggttccagtgtgtgtttgaggggattgctaaagcaggaagtcca
acccttctgaaccagatctacacagagctctacatcacagagggagggactggagaggtc
aatgatgaacatgaggtcagacagattgaaacagcatccaggaaaccacacagaccagaa
acaaccatcagacaagaagacatctttaaagtcccacctggaagagatcaaccaatcaga
acagtgatgacaaagggagtggctggcattgggaaaacagtcttaacccagaagttcact
ctggactggtctgaaggcgaagcccaccagaacatccagttcatatttccattcaccttc
agagagctgaatgtgctgaaagataaaaagttcagcttggtggaccttgttcatcacttc
tttactgaaactaaagaaatctgcagttttgaacacttccaggttctgttcatctttgat
ggtctggatgagagtcgacttcctctggacttccacaacaaggagatcctgactattaca
gagtccacctcagtggatgttctgctgaccaacctcatcagggggaaactgcttccctct
gctctcctctggataaccacacgacctgcagcagccaatcagattcctcctgagtgtgtt
ggcatggtgacagaggtcagagggttcactgacccacagaagaaggagtacttcaggaaa
agattcagcgataagaagaaggccagcaggatcatctcccacatgaagacatcacgaagc
ctccacatcatgtgccacatcccagtcttctgctggatcactgcaacggttctggaggat
gtgttgaagaccagagaggcaggaaagctgcccaagaccctgactgagatgtacatccac
ttcctggtggttcagaccaaaatgaagaaggtcaagtatgatggaggagctgaaacagat
ccactctggagtccagatagcaggaagattattgagtctctgggaaaactggcttttgat
cagcttcagaaaggaaacctgatcttctatgaatcagacctgatagagtgtggcatcgat
atcagagcagcctcagtttactcaggagtgttcacacagatctttagagaggagagaggg
ctgtaccaggacaaggtgttctgctttgtccatctcagtgttcaggagtttctggctgct
cttcatgtttatctggccttcatcaactctggtgtgaatctgattggtgaaaaacagaaa
actttcaagatatcttcatttgttcaaaagaaatctaaaaagaaaaatcttcatcagaga
gctgttaacaaggccttacagagtccaaatggacacctggatttgttcctccgcttcctc
ctgggactttcattgcagaccaatcagatactcctaaaaggtctgctgaaacagacaaga
agtagctcccagactgatcaaaaaacagttcagtacatcaaggagaagatcagtgagaat
gtgtctgcagagaaaaacataaatctgttccactgtctgaatgaactgaaggattgttct
ctagtggaggagatccaaaagtctctgagttcaggaagtctctccacagataaactgtct
cctgctcagtggtcagctctgatcttcatcttactctcatcaggagaagatctggatgtg
tttgacctgaagaaatactctgcttcagaggaggttcttctgaggctgctaccagtggtt
aaagcctccgacaaagctctacttagtggctgtaacctttcagagagaagctgtggagtt
atgtcctcagttctcagctcccagtcctccagtctcagagaactggacatgagtaacaac
aacctgcaggattcaggagtgaagcttctatctactggactggagagtccaaactgcaaa
ctagaaactctcagcttgtctggctgtctgatctcagaggaaggctgtgcttctctggcc
tcagctctgagctctaacccatcccatctgaaagagttggacctgagctacaatcatcca
ggagactcaggagtgaagctgctgtcggctggactgaaggatccacaatggagactggaa
gctctcagggtggagcctgctggagtccgatggttgacaccaggtctgaggaagtattcc
tgtcagctcacaatcgacacaaacacagtgaacagaaacctccaactgtctgaagacaac
aggaaggtgacacatgtggaggaacttcagtcatatcctgatcatccagacagatttgat
tacaggcatcctcagcttctatgtagaactggtctgactggtcgctgttactgggaggtc
gagtggagaggagttgtttatctatcagtgagttacagaagaatcaggagaagaggagga
agtgaagactgtatgtttggaggaaataatcagtcctggagtctgagatgctctgactgt
catggatactcagtctggcacaataacataaaagaacccatatcttcctcctcctcctcc
tccatctccaacagagtagcagtgtatgtggactgtcctgctggcattctgtccttctac
agagtctcctctgactcactgatccacctccacaccttcaacaccacattcactgaacct
ctgtatcctgggtttagattgtggttctctggttcctcagtgtttttgagctcagttgaa
tctaaagagtctcctcctgtcagagaaacactctcactgttaaacagatag
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