Girardinichthys multiradiatus (darkedged splitfin): 124859104
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Entry
124859104 CDS
T08099
Symbol
xpo1b
Name
(RefSeq) exportin-1 isoform X1
KO
K14290
exportin-1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03008
Ribosome biogenesis in eukaryotes
gmu03013
Nucleocytoplasmic transport
gmu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124859104 (xpo1b)
03008 Ribosome biogenesis in eukaryotes
124859104 (xpo1b)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124859104 (xpo1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124859104 (xpo1b)
03009 Ribosome biogenesis [BR:
gmu03009
]
124859104 (xpo1b)
03016 Transfer RNA biogenesis [BR:
gmu03016
]
124859104 (xpo1b)
03036 Chromosome and associated proteins [BR:
gmu03036
]
124859104 (xpo1b)
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
124859104 (xpo1b)
Ribosome biogenesis [BR:
gmu03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
124859104 (xpo1b)
Pre-60S particles
124859104 (xpo1b)
Transfer RNA biogenesis [BR:
gmu03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
124859104 (xpo1b)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
124859104 (xpo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
mTOR_dom
TPR_TNPO3_IPO13_2nd
BID
Hydrolase_3
BspA_v
Motif
Other DBs
NCBI-GeneID:
124859104
NCBI-ProteinID:
XP_047207585
LinkDB
All DBs
Position
22:37531906..37554717
Genome browser
AA seq
1071 aa
AA seq
DB search
MPAVMTMLADHAAQQLLDFNQKLDINLLDNVVNCLYHGVGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDASSV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVTLFTLTMCQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGNQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGSEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFI
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITSEIPQIFDAVFECTLNMINKNFEE
YPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTM
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKITV
GLNPGNPTNNQVFIQEYVANLLKTAFSHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEEREASLRQAQEEKHKIQMSVPGILNPHEIPEEMCD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagttatgacaatgttagcagaccatgcagcacaacagctgctggacttcaac
cagaaattggatatcaacctgctggataatgttgtgaactgcctgtaccatggcgtggga
cctcagcaaagaatggcgcaggaagtgttgacacacttaaaagagcatccagatgcatgg
acaagagtggacaccatcctggagttttctcaaaacatgaacaccaaatactatgctctt
cagatactggaaacagttatcaaaacaagatggaagattctgccccgaaatcaatgtgaa
ggtataaaaaagtatgttgttgggctcattattaagacttcatcggatgcttcaagtgta
gagaaagagaaagtgtacattggaaagctgaacatgatcctggttcagatcctaaagcag
gagtggcccaaacactggcccaccttcatcagtgacattgtaggtgcaagccgcaccagt
gagagcctctgtcagaacaacatgattattctaaagctgctcagcgaggaagtctttgac
ttttccagcggacagatgacccaggtcaaggcaaagcacctgaaagacagcatgtgcaat
gaattctcccagatattccagctttgccagtttgtcatggaaaattcccagaatgcccct
ttggtccacgctaccctggagacactcctgcgtttcctcaactggatcccgctgggatac
atctttgaaaccaaactaatcagcacattggtgtataagttcctgaacgttcccatgttc
cgcaacgtgacgttaaagtgcctaacggagatagctggagtgagcgtgagccagtatgag
gaacagtttgttacgctcttcactctgaccatgtgtcagctcaaacagatgctgcctctg
aacaccaacattcggctggcctacgccaacggaaaagatgatgagcagaacttcatccag
aacctcagtctgtttctgtgtaccttccttaaagagcacgggcagctcattgaaaagcga
ctgaacctcagagagacgctaatggaggcgctccactacatgctcctggtgtcagaggtc
gaagagactgagatctttaaaatttgtctggagtattggaaccacctggcagctgaactt
tacagagagagcccgttctccacatccacgtccccactgctctctggcaaccagcacttt
gacgtgccgcctcgcagacagctctacctccctgttctctccaaggtgcgtctcctgatg
gttagtcggatggccaagccagaggaggtcctggtggtggagaatgatcagggggaggtt
gtccgggagttcatgaaggacacagattccatcaacctctacaagaacatgagggaaacc
cttgtgtacctgactcacttggattatgcggacacagaacgtataatgacagagaagctt
cacaaccaggtgaatgggtccgaatggtcctggaaaaacctcaacacgttgtgctgggcc
atcggatcaatcagcggggccatgcatgaggaggatgagaagagattccttgttactgtc
atcaaggatctgttgggtctgtgtgagcagaagagaggaaaagacaacaaggccatcatc
gcttcaaacatcatgtacatcgttggccagtatccacgtttcctcagagcccactggaag
ttccttaaaactgttgtcaacaagctttttgaattcatgcacgagacccatgatggagtt
caggacatggcatgtgacaccttcattaagatagcccagaagtgcagacgccattttatc
caggtgcaggtgggagaggtgatgccctttattgatgagatcctgaacaacatcaacacc
atcatctgtgacctccagcctcagcaggtgcatacgttttatgaggcagtgggttatatg
attggagcccagacagaccaggctgttcaggagcacttgatagaaaaatacatgctgctg
cccaatcaggtgtgggacagcatcatccagcaggccacaaagaatgtcgacatcttgaag
gacccagagacagtcaaacagctgggcagcatcttgaagaccaacgtacgagcctgcaag
gctgtgggacaccctttcgtgatccagctgggtcggatttatctggacatgctcaacgtc
tacaagtgtctcagcgagaacatctctgctgctattcagacaaacggtgagatggtgacg
aagcagccactgatccggagtatgagaacagtgaaacgagagacgctgaaactgatctca
ggctgggtcagccgatcaaacgatccgcagatggtcggcgagaactttgtacccccgctc
ctggatgccgtcctcatagactaccagcgaaacgttcccgcagcgcgagaaccagaggtg
ctcagcaccatggcaaccattgtcaacaagctgggaggtcacatcaccagtgagatcccc
cagatctttgacgccgtctttgagtgcacgctaaacatgatcaacaagaactttgaggag
tatccagagcaccggacccacttcttctacttacttcaagcggtaaactctcactgcttc
ccagcattcctggcaatccctcccgcccagtttaaactggtcctggactccatcatttgg
gccttcaaacacaccatgaggaacgtggctgacactggtctgcagattctgtacacgatg
ctgcagaatgtggcccaggaggaagctgctgctcagagtttctaccagacgtatttctgt
gatatcctgcagcacatcttctctgtggtgactgacacctcacacactgccggtctgact
atgcacgcgtccatcctggcatacatgttcaacctggtagaggaaggaaagatcactgta
ggtctgaacccaggcaatcccaccaacaaccaggtgttcattcaggaatatgtggccaac
ctgctgaagactgctttctcccacctacaggatgcccaggtgaaagtgtttgtgacgggg
ttgttcagtctaaaccaggacattcctgcattcaaagagcacctgagggacttcctagtg
cagataaaggagtttgcaggcgaggacacctcagacctgtttctggaggagagggaagca
tcgctccgtcaggcccaggaggagaaacacaagatccagatgtctgtgccgggcatcctg
aaccctcatgaaatcccagaggagatgtgtgactga
DBGET
integrated database retrieval system
