Girardinichthys multiradiatus (darkedged splitfin): 124859250
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Entry
124859250 CDS
T08099
Symbol
thbs2a
Name
(RefSeq) thrombospondin-2
KO
K04659
thrombospondin 2/3/4/5
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04145
Phagosome
gmu04510
Focal adhesion
gmu04512
ECM-receptor interaction
gmu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124859250 (thbs2a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124859250 (thbs2a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
124859250 (thbs2a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
124859250 (thbs2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124859250 (thbs2a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmu04147
]
124859250 (thbs2a)
00536 Glycosaminoglycan binding proteins [BR:
gmu00536
]
124859250 (thbs2a)
Membrane trafficking [BR:
gmu04131
]
Endocytosis
Phagocytosis
Opsonins
124859250 (thbs2a)
Exosome [BR:
gmu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124859250 (thbs2a)
Exosomal proteins of colorectal cancer cells
124859250 (thbs2a)
Exosomal proteins of bladder cancer cells
124859250 (thbs2a)
Glycosaminoglycan binding proteins [BR:
gmu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124859250 (thbs2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
TSP1_ADAMTS
EGF_3
TSP1_CCN
Laminin_G_3
cEGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
124859250
NCBI-ProteinID:
XP_047207879
LinkDB
All DBs
Position
22:complement(29845272..29864730)
Genome browser
AA seq
1185 aa
AA seq
DB search
MILRRSLLFLLLSSTFHHVTPQDGDQEDETSFDMFEISHITRRTLGAKQFRGQYSDLPAY
RFIRFDHLPPVSPPILKQILQQIQNNEGFLFIASIRQDRASRGTLIGLESPDGRRQFEIV
SNGRANTLDLVYWVDGSQNVVSFEDVDLADSQWKNITLHIHGENANLFVGCNLIDSFILD
EPFYERLQAEGSRMYIAKGSTRENHFRGLLQNVRFIFDTSVEDILLSRDCEVTRLDDDNG
LRESTEIVDVSPSITTNIIGQKTDDLSAEMCARSCEELSTMFQELKGLRVVVSNLIDGLQ
KVTEENTVMKEALGRIKDTKEKNMCWQDGRLFEDKEDWVVDSCTKCTCQESKIVCHQITC
PPVACASPSLIDGECCPVCMPKDSEDGWSPWSEWTECTVTCGIGTQQRGRSCDATSNPCT
GPSIQTRKCSLGKCDSRVRQDGGWSLWSPWSSCSVTCGEGQITRIRHCNAPVPQLGGKDC
EGSGRETQSCTAKPCPIDGGWGPWSPWATCSVTCGGGIKSRSRECNSPQPQHGGKKCIGE
ATDSDSCNKEDCPIDGCLSNPCFGGVDCSSSADGSWECGPCPAGFRGNGTHCEDINECDM
VSDVCYKVSGTQRCINTDPGFHCLPCPKRYKGTQPFGMGVEAARRNKQVCEPENPCKDKT
HNCHKYAGCIYISHFSDPMYKCECRTGYAGDGFICSEDSDLDGWPNQNLVCGANSTYHCK
KDNCPNLPNSGQEDFDRDGQGDACDKDDDNDGIMDERDNCALLYNPRQFDFDKDEVGDRC
DNCPYDHNPAQIDTDNNGEGDACAVDIDGDEIQNENDNCPYVYNTDQKDTDMDGVGDHCD
NCPLLHNPDQTDVDNDLVGDQCDNNQDIDEDGHQNNLDNCPYVANANQADHDKDGKGDAC
DYDDDDDGIPDDKDNCRLTPNADQEDADGDGRGDACKDDFDNDSIPDILDVCPENNAISV
TDFRKFQMVHLDPKGTTQIDPNWVVRHQGKELVQTANSDPGIAVGFDEFSAVDFSGTMYV
NTDRDDDYAGFVFGYQSSGRFYVVMWKQITQTYWEDKPSKAFGISGVSLKVVNSTTGTGE
NLRNALWHTGNTPGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGFIRVVVYEGKQIMAD
SGPVYDKTFAGGRLGLFVFSQELVFFSDLKYECRDKPELPTVFTR
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgatactcaggaggagtctcctcttcttgttgctctcatccacattccatcacgtaaca
ccccaagatggagaccaggaagatgaaacatcatttgacatgtttgaaatcagccacatc
acacgcaggactctgggggccaaacaattcaggggccaatactccgatctccctgcctac
cgtttcatccgcttcgaccacctgcccccagtcagtcctcctattctaaaacaaatacta
cagcagatccaaaacaacgagggctttctgttcattgccagcatccgtcaggatcgcgcc
tcaaggggcaccttaataggcctggagagccccgatggccggcggcagtttgagattgtc
tccaacggacgtgccaacaccctggacctggtgtactgggtggacggctcccagaacgtg
gtctcgttcgaggacgtggacctggccgactcgcagtggaagaacatcacacttcacatt
cacggggagaacgcaaacctgtttgtgggttgcaacctgattgacagcttcatcctggat
gagcccttctatgaacgcctgcaggcagaggggagccgaatgtatatcgcaaagggatcc
actcgggaaaaccactttagaggcctccttcagaatgtacgcttcatctttgatacatca
gtggaagacatcctcctaagcagagattgtgaagtcacgagactggatgatgacaatggc
ttgagagagagcacagaaattgtggatgtaagtccttccatcaccacaaacatcataggt
cagaagacagacgacctgagtgcagaaatgtgcgcacgctcctgtgaagaacttagcacc
atgttccaagagctgaaaggcctgcgtgttgttgtcagtaaccttattgacggtttgcaa
aaagtgacagaggagaacacagtcatgaaggaggcactagggagaatcaaggacactaaa
gagaaaaacatgtgctggcaggacgggcgcctgtttgaggacaaagaagactgggtggtg
gacagctgcactaaatgtacctgccaggagtccaagatagtgtgccaccaaattacgtgc
cctccggtggcctgtgccagcccctctttaatagatggagaatgctgccccgtgtgcatg
cccaaagacagtgaggatggctggtccccctggtcagaatggacggagtgcacggtcacc
tgtgggataggaactcaacagaggggtcggtcatgtgatgcaaccagcaacccctgcacc
ggaccatctatccagacccgaaagtgcagcttgggaaaatgtgacagccgtgttcggcag
gatgggggatggagtttgtggtcgccatggtcttcttgctcagtgacctgtggagaagga
cagatcaccagaataaggcactgcaatgctcctgtcccacagctgggcgggaaagactgt
gaagggagcgggagagagactcagagctgcactgccaagccctgtccgattgatgggggt
tggggaccttggtctccatgggcaacctgttctgtaacctgcggaggtggaatcaaaagt
cgctcgcgcgagtgcaacagtcctcaacctcagcatggcggcaagaagtgcattggagaa
gccactgacagcgacagctgcaacaaggaagactgcccaattgatggatgcctatctaac
ccttgctttggtggggttgactgcagcagctctgcagacgggtcctgggagtgtggcccg
tgtcctgctggttttcgtgggaatggtactcactgtgaggacattaatgagtgtgacatg
gtgtctgatgtttgctacaaagtaagtggaacgcagcgctgcatcaacaccgatccaggt
ttccactgcctgccctgtcccaagcgctacaagggcacccagccttttggtatgggcgtt
gaggcagcgaggagaaacaaacaagtatgcgagccagagaatccatgtaaagacaagacc
cacaactgtcacaaatatgctggatgtatatacatcagccacttcagtgacccaatgtac
aaatgtgagtgtcgcaccggctacgctggagatggctttatttgttcagaggactcagac
ttggatggatggccgaatcagaacctggtgtgcggtgcgaacagtacatatcactgcaag
aaggataactgccctaacctaccaaactctggacaagaggactttgacagggatggacaa
ggagacgcttgtgacaaggatgatgacaatgatggaattatggatgagcgagataactgt
gccctcctttacaatcctcgccagtttgactttgataaggatgaagttggtgaccgctgt
gacaactgtccttatgatcacaaccctgcccaaatagacactgacaataatggtgaaggg
gatgcctgtgctgtagacattgatggagatgaaattcagaatgagaatgataactgtccc
tatgtgtacaacactgaccagaaggatacagacatggatggggttggtgaccattgtgac
aattgcccattgcttcataatcccgaccagaccgatgtagataatgacctggttggagac
cagtgtgataataatcaggacatcgatgaagatggtcatcagaacaatttagacaactgt
ccctatgtggccaatgccaaccaggcagaccatgacaaggatggaaaaggagacgcatgt
gactatgatgatgatgacgatggtatacctgatgacaaggacaactgcagactaacacca
aatgcagaccaagaggatgctgatggtgatggaagaggggacgcgtgcaaagacgatttt
gacaatgacagcatcccagatatcctcgatgtgtgtccagagaacaatgccattagtgtt
acagacttcaggaagttccagatggtccacttggatccaaagggaacaactcaaattgat
cccaactgggtggtcagacaccagggaaaagaattggttcagaccgccaactctgaccca
ggcattgcagttggttttgatgagttcagtgccgtggacttcagtggaaccatgtacgtg
aacacagacagagatgatgactatgctggctttgtgttcggctatcagtcaagcggacgc
ttttacgttgtgatgtggaagcagatcacacagacttactgggaggacaagccatccaaa
gcttttggcatctctggcgtttcactgaaagttgtcaactcaaccacaggaactggagaa
aacctcaggaatgctctgtggcacacaggaaacacccccggacaggtgcgcactctatgg
catgaccccaaaaacattgggtggaaagattacacagcttaccggtggcatctcatccat
agacctaagactggctttataagggttgttgtatatgaagggaaacagatcatggctgac
tcaggaccagtttatgacaagacatttgccggaggcaggttaggcctgtttgtcttctca
caagagttggttttcttctccgacctcaagtatgagtgcagagataaaccggagttacca
acagtgttcacaaggtaa
DBGET
integrated database retrieval system
