Girardinichthys multiradiatus (darkedged splitfin): 124859428
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Entry
124859428 CDS
T08099
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124859428 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gmu04990
]
124859428 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
gmu04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
124859428 (pdlim1)
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
LIM
PDZ_2
Motif
Other DBs
NCBI-GeneID:
124859428
NCBI-ProteinID:
XP_047208158
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All DBs
Position
22:complement(41122721..41132294)
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AA seq
323 aa
AA seq
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MPPVRVVLQGPGPWGFRLVGGKDFEQPLAISRVNPGSKAAQADLCIGDIILSINGEATED
MTHLEAQNKIKGCIEEMALSIDRSESKLWSPLSSEEGKTHPYKMNLSSEPREVKHIGSSH
NRSALPFSGFGPKVMTNQYNNPSGLYSSENIKDFNSAVDEVKTVATAHEPNIKAPSEPSA
AGKRPAIPADSEVYKMLQENQESDEPPRQSASFKVLQEILETGDLEKPSGFRSVKAPTTK
IGSSVGNTEKLPVCDKCGSGIVGMLVKLRDKFRHPDCYTCTDCDVNLKQKGHFFVEDQIY
CEKHARERVTPPEGYDVVTVFPK
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctgtccgggtggtgctgcagggtcccggcccgtgggggttccggctcgttggg
ggtaaggacttcgaacagccgctggctatttcccgggtcaaccctggaagtaaagcagct
caagccgacttgtgcatcggagacatcattttgtctatcaacggtgaggcaacagaggac
atgactcacttggaggcgcagaacaagataaagggctgcatagaggagatggcgctctcc
atcgacaggtcagaatccaagctgtggtcaccgctttcatctgaggaaggaaagacacac
ccttacaagatgaacctttcctctgaaccgcgggaggtaaaacacatcggctcgtcccac
aacaggagcgccctgcctttttctggttttggccccaaagttatgaccaaccagtacaac
aatccatctggtctgtactcatcagagaacatcaaggacttcaactccgctgtggatgaa
gtgaagaccgtggccacagctcatgagcccaacatcaaagctccatcagagccgtcagca
gcaggcaagcgaccagccataccagcagactctgaggtctacaagatgctccaagagaac
caggagtctgatgagccaccacgacagtctgcttctttcaaggtgcttcaggagattctt
gagacaggtgacttggaaaaaccttcaggcttcaggagtgtgaaagcaccaacaacaaag
atcggatcttctgtggggaacacagagaagttgcccgtatgtgacaaatgtggttctggg
attgtaggcatgttggtgaagctgagggacaagtttcgtcaccctgactgctacacctgc
acagattgcgatgtcaacctaaaacagaagggacatttcttcgtggaggaccagatttac
tgcgagaaacacgcacgcgagcgagtcactccacctgagggctatgacgtggtcaccgtt
ttccccaagtag
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