Girardinichthys multiradiatus (darkedged splitfin): 124859549
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Entry
124859549 CDS
T08099
Symbol
utp4
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog isoform X1
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124859549 (utp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gmu03009
]
124859549 (utp4)
Ribosome biogenesis [BR:
gmu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124859549 (utp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_Prp19
WDR55
Beta-prop_EML_2
WD40
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_NUP159_NUP214
WD40_Gbeta
Beta-prop_TEP1_2nd
PROPPIN
Beta-prop_IFT140_1st
Lactonase
Beta-prop_WDR75_1st
Ge1_WD40
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
124859549
NCBI-ProteinID:
XP_047208368
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Position
2:complement(45782442..45802672)
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AA seq
722 aa
AA seq
DB search
MTHFRSLFLLRVINVVPDVFKRAALNTNLSFFLSHCQMGEFKVHRVRFFDYMPSAIRAMA
FNSHTERLAVARADGAVEIFHFADNYFQEKVIPGRDRRAIEALCWVGHRLFSAGLDGEVT
EYDLENLRARYSIEAYGGPIWAISSNSQGTLLAAGCEDGTVKMFEILEERIQFQRNLSRQ
NGRIISLSWHPSGALIAAGMMDMVRIFDTETGHATHRLLVERGVGASKSREVVVWSVAFL
SDYTIISGDSVGKVQIWDGLTGTLIRTHLVTKWDVLALSISQDESSVIAGTSEGTIVQFQ
FISSTVGQQDKHWVRTRTFKNHSHDVRALVHTDTAVVSGGMDTQVVVRPLLDKVEKNTQE
SALRKIAFPHRSLVSCAKKTGLLLFQFPDHLELWRLGESDGNGTPGESLPVKRNPEKLIQ
LKRKGEDHICCSTLSPCGSWLAYSTVSSVCLYRLQLSSNNISIQKVSKLPKELRSVHQLC
FSSDSSRLFASSSLSSVIVVALDQTECKYLHTLKHKSGSKQPIHILSPSEDGQWLATANT
GCEIHVFNLRKMKLHCSVPAYSSCPTAVSIHPTSCNLLSVHADQQIFEFSLKQKEYTEWS
RQLQRQGLHPLWLQRDTPITRVTFNPKNPAHIVLHDTFMFCIIDQSLPLPEPETKLYNQM
LLRSLPQPLRLRESHAFKICKNYQHLLSVNLLEDLSLVVVERPLLDIMSQLPAPVRQKKF
AT
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatttccgctccctcttcctgctccgggtcatcaacgtggttcctgatgttttc
aaacgtgcagcgttaaatacaaatctgagtttttttctgtcccactgtcaaatgggggag
tttaaagtgcaccgggtccgcttctttgactacatgcccagcgccatccgggccatggcc
ttcaacagccacacggagcggctggccgtggcccgagctgatggagccgtggagatcttt
cactttgctgacaactacttccaggagaaggtaatcccagggcgggacaggagagccatc
gaggctctttgttgggtgggccatcgtctattcagcgctggtttggacggggaggtcaca
gagtatgacctggagaacttgagggcccgatacagcattgaagcatatggaggaccaatt
tgggccatcagcagcaacagccaggggacgctgctggcggctgggtgtgaagacggaact
gtgaagatgtttgaaatcctggaggagaggattcagtttcagagaaaccttagcaggcag
aacggtcggatcatatctctgtcctggcatccgtctggtgcactgatagcagcaggaatg
atggacatggtcaggatctttgatacggagacgggccacgccacacacaggctgctggtg
gagcgaggtgtgggagcctctaagagcagggaggtggtggtttggagtgtcgcctttttg
tccgactataccatcattagtggtgattctgtaggaaaggtccagatctgggatgggtta
actggaactctgatcagaacccatctggtcactaagtgggacgtcctggctctgtccatt
tcacaggatgagagcagcgtgatcgctgggacgtctgagggaaccattgtccagtttcag
ttcatctcctccaccgtgggacagcaggacaagcactgggtccgtaccaggacctttaag
aaccattcgcatgatgtgagggcgctggttcacaccgacacggctgtggtttctggaggt
atggacacccaggtggtagtgagacccctgctggacaaagtggagaagaacacccaggag
tcggcacttcgcaaaattgctttcccacatagaagcctcgttagttgtgcaaagaaaaca
ggacttctgctcttccagttcccggatcatttggagctgtggaggcttggagagagcgac
ggaaacggaacacccggggagagtctgcctgtaaagaggaacccagagaaactgatccag
ctgaaaaggaagggagaggatcatatctgctgcagcacattgtctccatgtggaagctgg
ttagcttactccacagtctccagcgtttgtctctacagactgcagctcagcagcaacaac
atcagcatccagaaggtgtccaaactgcccaaagaactgcgctcggtccatcagctctgc
ttctcttcggactcctccagactgttcgcgtcctccagtctctcctccgtcatcgttgtt
gctctcgatcagacggagtgtaaataccttcacaccctcaaacataagtctggttccaaa
cagccgatccacatcctgtctcccagtgaagacggtcagtggctcgctacagcaaacaca
ggctgtgagatccacgtcttcaacctccgcaagatgaagctgcactgctcggtcccggcc
tacagctcctgtcccacagccgtctccatccacccaacgagctgcaaccttctctctgtg
cacgctgaccagcagatctttgagttttccctgaagcagaaggagtacaccgagtggagc
cggcagctgcagagacaaggacttcaccccctgtggctgcagagggacactcccatcacc
cgtgtcacgttcaacccaaaaaatccagcgcacatcgtgctgcatgacacgttcatgttc
tgcatcattgaccagagtctgcctcttcctgaaccagagacgaagctttacaatcagatg
ctcctccggagtcttcctcagccgctgcgtctcagagagagccacgccttcaagatctgc
aagaactaccagcacctcctttctgtgaacctgctggaggacctctcgctggttgtagtg
gagcgccccctactggacatcatgtctcagctccctgctcctgtccggcagaagaagttt
gccacctaa
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