Girardinichthys multiradiatus (darkedged splitfin): 124859650
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Entry
124859650 CDS
T08099
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124859650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124859650
Enzymes [BR:
gmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124859650
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
HECT type E3
124859650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
TMEM260-like
Motif
Other DBs
NCBI-GeneID:
124859650
NCBI-ProteinID:
XP_047208507
LinkDB
All DBs
Position
2:complement(40374803..40394681)
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AA seq
1008 aa
AA seq
DB search
MFSWGEDCQRGFWLNGDSSTDKGVHHLNVGYNVTGLSAGRSVLAFVKSNGNAFILRTYES
KDGNRVRGKQKFVKCKEKIEAVSCEDDVVTLLSERGSVFCVDTTHPPYTPRILDAFSNIQ
VAQVACGSQHSVALTKECQVYTWGLDSRGQLGLGKKSSGARSPQQVRSLSSVPVVRVSAG
GDQSFALSVSGGVFCWGRNNCGQLGLGDTKDTHTPTCVHSLNLKKTRDICCGNDHTAILT
KQGAVFTFGSGQYGQLGHNSFRNELHPRLVAELWGAKVIKIACGGNHTLVLTEGYKVYSF
GCGAQGQLGNREESNPSVPLPVLLPRVSDSMDPKIGTIFAGENCSFATCSFDEDVNRNLD
ANRFSNATQHGLEVMVDNWTSKCDDKLWKKIRQEIRRTFSSAACLNKSFLEQSRDKHFQT
SSKCHGLNLKLARQHFKKLVKTEFVWDQVEAAVLHLLPLLDKNPVGVESLRIFLLLNELL
HIIQKYRKQQSSKLAEMVAAAVTSLSRKSLEVLGEWWSSLSPSSMGRFVSVWKQALSVIL
SKENVPRSDGVRNLLQVLQYMYNVNSRVAESRRLPESDFYLSFNPNFLREELEIWRLKSK
RRYVRSEPLVLCSFPIVMDLQAKKLVFDMNTFFTMEEFIMGVLEQIIAEAFLDLGLCYPN
APVFQLYLNRASVLKDTFEQLADADQRDYKRELQVFFDNNYEIDPVYVKDFFHEVFHELM
SAESEMFMFNDSKTLAWFSSKASQEDKRFYLFGVLCGLALYNHMIIYLPFPLVLFKKLLG
GSPTLDDLKEFSPSFGKSLQCILDEYTDEDLEDIYFSIPWDATEVALDPENPEKQVTSEN
KKEFVDAFVNHAFNASVKSVFEEFKQGFFQVCNRDLVRLFTPKELQEILVGKDFHDWEKL
KQNTVYEGGYSVDHPIVQTFWEVFDELTENQKKTFLWFVTGFQRVPILGLDKITMKIKVK
HFQDLSDQYYPATHTCSSTLELPLYSTKEIMQSKLTEALSNKRISQCL
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgttctcttggggagaggactgtcagcgaggtttctggctgaacggagactccagcaca
gataaaggagtccatcatttaaatgtcggttataacgtgacgggtctgtctgcaggtcgc
agcgtcctggctttcgttaaaagcaacgggaacgcgttcattttgcgcacttatgagagc
aaagatggaaacagggtgagaggaaaacagaagtttgtgaaatgtaaggagaagattgag
gccgtgagctgtgaagatgatgtggtaacgctgctgtctgagagaggctcagttttctgt
gtggacacgacccaccctccgtacacaccaaggatattggacgctttctctaacatacaa
gttgcacaggttgcttgtgggagccagcattcagttgccctgaccaaagagtgtcaggtg
tatacgtggggcctggactccaggggtcagttgggcctggggaagaaaagttcaggagcc
agatcaccacaacaagtccgatccttatcgtccgtccctgtggttcgggtctcggcagga
ggagaccagagctttgccctatctgtgtctggaggcgtgttctgctggggcagaaacaac
tgtggacagctcggattaggagacacaaaagacacacatacgccaacttgtgttcatagt
ttgaatctgaagaaaacacgcgacatttgctgtggaaatgaccacacggccattttgaca
aagcagggggcagtgttcacatttggctctggtcagtatggacaacttggacacaactcc
tttcgaaatgaactccaccctcgacttgttgctgaactttggggggcgaaagttataaaa
attgcatgtggaggaaatcacacattagttttgacggagggctacaaggtctactccttt
ggttgtggagcgcaaggtcagctgggaaacagagaagaaagcaatccgtctgtgccacta
cctgttcttctacctcgcgtttcagactcaatggatcccaaaattggaaccatctttgct
ggagaaaactgttcatttgcaacatgctcttttgatgaggatgttaacagaaatttagat
gctaacagattcagcaacgcaactcagcacggtctagaagtcatggttgataactggacg
tctaaatgtgatgacaagttgtggaaaaagattagacaggaaatccgcagaacgttttca
tccgcagcctgtctgaataaaagcttccttgaacaaagcagagataaacatttccaaacc
tcatcaaagtgccatggtctgaacctgaaactggctcgacagcattttaagaaactggtg
aagacggaatttgtttgggaccaggtcgaagctgcggttctgcatttgctccctctcctt
gataagaacccagttggagtggagagtctgaggatctttctgctcctcaatgagcttctt
catatcattcagaaatacagaaagcagcagagcagcaagcttgctgagatggtcgctgct
gctgtgacaagcctgtcaaggaaaagccttgaggttttaggggagtggtggtcatcgctg
tcgccatccagcatggggaggtttgtgagcgtgtggaagcaagcgctctctgtgattttg
tccaaagaaaatgttcctcgcagtgatggtgtcagaaacctgcttcaagtccttcagtac
atgtacaatgttaacagcagggttgcagagtctcgaaggttgccagaaagtgatttttat
ttgtcgttcaacccaaattttcttcgtgaagagctggaaatctggcgtttaaaatcaaaa
cgcagatacgtgcgttctgagccacttgttctgtgcagcttcccgattgtgatggatctg
caagcaaagaaactagtttttgacatgaatacctttttcaccatggaggaattcataatg
ggtgttttggaacaaatcattgcggaagcatttctggacttaggattgtgttacccaaac
gctccagtcttccaactgtacctaaatcgagcttctgtgttaaaggacacatttgaacag
ctggctgatgctgatcagagagactacaagagggaacttcaggtgttttttgataacaat
tatgaaattgatcctgtctatgtaaaagacttttttcatgaagtctttcatgagttgatg
tctgctgagtctgagatgttcatgttcaatgactccaaaacattggcatggttctcctct
aaagcttcacaggaggacaagcgtttctacctgtttggagttctgtgtggactggctttg
tacaaccacatgatcatttacttacccttcccactggtgctgttcaaaaagctgctcgga
gggagccctacgctggacgatttgaaagaattcagcccaagttttggcaagagtctgcag
tgtatcctggacgaatacacagatgaggacctagaggacatatatttttcaatcccctgg
gatgccactgaggtcgctcttgatcctgaaaatcctgaaaagcaagtgaccagcgagaac
aagaaagagtttgtggatgccttcgtgaaccacgccttcaatgcatctgtgaagtctgtg
tttgaggagttcaagcaaggtttctttcaagtgtgcaaccgggatttggtgaggcttttt
acgccaaaggagttgcaagaaatcctagtgggaaaggatttccatgactgggaaaagctt
aagcagaacacagtttatgaaggtgggtacagtgtcgaccacccaatcgtacagacgttt
tgggaagtttttgacgagcttacggagaatcagaagaaaacctttctatggtttgttacc
ggatttcaacgggtgcctatcctcggcttggataagataacgatgaaaatcaaagttaaa
cacttccaggatctctccgaccagtattatcctgcgacacacacatgttcctccaccctg
gagctgccgctgtattcaaccaaagaaatcatgcaaagcaaactgacagaagctctgagc
aacaaaaggatcagtcagtgtctttga
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