KEGG   Girardinichthys multiradiatus (darkedged splitfin): 124859778
Entry
124859778         CDS       T08099                                 
Symbol
smu1a
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
gmu  Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:gmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gmu03041]
    124859778 (smu1a)
Spliceosome [BR:gmu03041]
 Complex B
  Other components
   Complex B specific factors
    124859778 (smu1a)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML LisH_TPL Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_Vps41 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_BBS7 WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_DCAF12 Beta-prop_VPS8 Beta-prop_IP5PC_F Beta-prop_NOL10_N LisH LisH_PAC1 VPS8_N LisH_WDR26 WD_LRWD1 zf_topless PROPPIN DUF7165 Beta-prop_IFT122_2nd PA14
Other DBs
NCBI-GeneID: 124859778
NCBI-ProteinID: XP_047208571
LinkDB
Position
23:complement(43168315..43174847)
AA seq 513 aa
MSIEVESADVVRLIMQYLKENNLHRTLATLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQSLKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEERFPTQLSRHIKFGQKSHVECSRFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCVSFCKDTSQLLSASFDQTIRIHGLKSGKSLKEFRGHASFVNEATFTPD
GHHIISASSDGTVKVWNVKTTECTSTFKPLGASAGTDITVNNVLLLPKNPEHIVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCSLSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLIATYSEDGLLKLWRP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctattgaagtggaatctgctgacgtggtccgtctgattatgcagtatttgaaggaa
aacaatctgcaccgaaccctggccacgctgcaggaggagacaacggtgtctctaaataca
gtggacagcatagagagctttgtggcagacatcaacagtggccactgggataccgtcctg
caagccatccagtccctcaagctaccagataagaccttgatagatctttatgaacaggtt
gtcttggagcttattgagcttagagagcttggtgctgcccgttcgctcctcagacagacc
gatcccatgatcatgttgaaacagacgcagccagagcgatacatccacctggagaacctg
ctagctcgctcctactttgatcccagagaggcttacccagatggcagcagtaaagagaag
cgacgcgcggccatcgctcaggctctggcaggagaggtcagcgtggtgccaccctcccgt
ctcatggctctgctgggacaatctctgaagtggcagcagcatcaaggtctcctgccgcct
ggtatgaccattgacttgttcaggggtaaagcggctgtgaaagacgtagaggaggagcgc
ttccccactcagttgagcaggcatataaagtttggacagaaatctcatgtggaatgttct
agattctcccccgatggtcagtatctggtcactggttctgtagatggtttcattgaagtc
tggaacttcaccactggaaaaatcaggaaggatctgaaatatcaggctcaagataacttc
atgatgatggatgatgctgtgctgtgtatgtgcttcagtcgagataccgagatgttagca
acaggagcccaggatggaaaaatcaaggtgtggaagatccagagtggtcaatgtctgaga
agatttgagcgtgcccacagcaaaggagtaacctgtgtgagtttctgtaaagacaccagc
cagctgctcagcgcctccttcgaccagaccatcagaatccatggactgaaatccggtaaa
tcgctaaaggagttccgcggccacgcctcgttcgtcaacgaagccacatttaccccagat
ggccatcacatcatcagtgcttcctcagatggaacagttaaagtgtggaacgtgaagacc
acagagtgcaccagcactttcaagcctcttggcgcatcagctggaacagacatcacagtc
aacaacgtccttctgctgcccaagaacccagaacatattgtagtgtgtaaccgctccaat
acagtggtcatcatgaacatgcagggacagatcgtgaggagcttcagctccggtaagagg
gaaggcggtgactttgtgtgctgctctctgtcgccccgcggcgagtggatctactgcgta
ggtgaagactttgtgctgtactgcttcagcaccgtcacaggcaaactggagagaacgctg
acggtccacgagaaggatgtgattggaattgcccaccacccccaccagaacctgatcgcc
acctacagcgaggatggcctgctgaaactctggagaccttga

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