Girardinichthys multiradiatus (darkedged splitfin): 124859899
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Entry
124859899 CDS
T08099
Symbol
si:ch211-114c17.1
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmu03041
]
124859899 (si:ch211-114c17.1)
Spliceosome [BR:
gmu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124859899 (si:ch211-114c17.1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_16
TPR_11
TPR_12
HrpB1_HrpK
HAT
UTP6_C
NUP160_helical
TAF1_subA
TPR-S
Motif
Other DBs
NCBI-GeneID:
124859899
NCBI-ProteinID:
XP_047208737
LinkDB
All DBs
Position
23:complement(30441029..30452169)
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AA seq
734 aa
AA seq
DB search
MAAEGFKEMSGNGVLEESPAMDVTEAPPPPPPPPPPPPPEALEENGSAAVAPEAPAGPES
YSTVPAAANEEGELPADFERLWNAAHDNPQDFTSWTDLLQYCEHEGHVIASRRALEAFLV
RYPLCYGYWKKFADLERRAGDNNKAEEVCIRGLQAIPLSVDLWIHYINLLLGTLDMNLPD
SAVRIRSVFENAVAACGLDFHSDRLWDLYMEWEKEHGNMRNAAAVLDRALRVPTQLYNTH
YEKFKEHLNNHPPKDVLPSEEYEELRAFCRQSQKAERAEQAPEVEEERPPGEEEPATPEG
ADSEELMQKIREQVLLRRDKVYQDNEDEVRKRWNYEDAIKRPYFHVRPLDRLQLRAWHTY
LDWEIAELNRDTKDATQGEDTHDPNQESTEESEVTTQPRAASDDVADAQGDQRVRILFER
CLIAVALYEEFWTRYIQYLEPQSVDEARAVYRRACEVHLPNKPNIHMQWATFEERHGDLT
EARRVLEALEKTLPGLAVIRLHRAALERRAGQLDQSEALLREAVAECKERPMLHAFYSIK
LARLLLKVSRNPDGARTVLQEALEISPDNDKLHLNLLELELSGDPWASAEAVQECVTRAL
AAPLTPQAKLLVSQRGLQFTEEYSNSVQSVLAVYEAHQKLLEELGGTKREAENGDEDPEK
ASKTADSSSAHAVSSASNVPVTTPPLPPVMGTDTSTQAEYGAYSSWYQQPQYGSYGNYGY
QNTWNYNQGYYPPS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagggcttcaaggagatgagcggtaacggggtgcttgaagagtctccagct
atggatgtcactgaggctccaccgccgccgccgccaccaccacctcctcctcctcctgaa
gcattagaggaaaatggcagtgcagctgtggcccctgaggctcctgcaggccccgaaagc
tattccacagtcccagcagcagcgaacgaggagggggaactccctgcagactttgagcgg
ctgtggaacgccgcgcacgacaatcctcaagacttcaccagctggaccgatctgctccag
tactgcgagcatgagggtcatgttattgcgtcccgcagggcgctggaagcctttctggtt
cggtatccactctgctacggctactggaagaaatttgccgacctggagcgccgtgcaggg
gacaacaacaaagcagaggaggtgtgtattcgcggtcttcaagcaattcctctgagcgta
gatctttggatccactacatcaatctgctgctgggaacactggacatgaacttgccggat
tcagctgtacgaattcgcagtgttttcgagaatgctgtagcagcatgcggtctggatttc
cactcggaccgcctctgggatctctacatggagtgggaaaaggagcacgggaacatgagg
aacgcagcggctgtcctggacagagcgctcagagttcccactcagctctacaacacccac
tacgaaaagttcaaagagcacctcaacaaccacccgcccaaagacgtgctcccctctgag
gagtacgaggagctgagggcgttttgccggcagagccagaaggcagagcgtgccgaacag
gctccggaagtggaggaggagaggccgccgggggaggaagaacccgctacacctgagggt
gcagactcggaggagctgatgcagaagatacgggaacaggtgctgcttcgtagagacaaa
gtgtaccaggacaacgaggacgaggtccggaagagatggaactatgaagatgcgatcaag
cgtccatatttccacgtcaggccgctggaccgcctccagctcagagcctggcacacttac
ctggactgggagatcgctgagctgaacagggacaccaaggacgccacacaaggcgaggac
acacatgatccaaaccaggaatcaacagaggagtctgaggtcacaacgcagcctcgggca
gcatcagatgatgtagcagacgcgcagggagaccaaagagttcgcatcctgtttgagcgc
tgcctgatcgccgtcgctctgtatgaggagttctggaccaggtacattcagtacctggag
ccgcagagtgtggatgaggcccgggctgtctacaggagagcctgtgaggtgcacctccct
aacaaacccaacatccacatgcagtgggccacctttgaggagaggcacggtgacctaact
gaggcccggcgggtgctggaggccctggagaaaacccttcctggtctggctgtcatacgc
ctccaccgggccgctttagagcgacgagcgggccagctggaccagtcggaggccttgctg
cgagaggcagtcgctgaatgtaaagagaggccaatgctgcacgccttctactccatcaag
ctggctcgtctgctgctcaaagtgtccagaaaccctgacggcgcccgcacagttctacag
gaagcactggaaattagcccggacaacgacaaactgcacttgaacctgttggagctggag
ttgtctggggacccgtgggcttcagccgaggcggtgcaggagtgtgtgactcgggccctg
gcggctcctctcaccccacaagccaagttacttgtgtcacagagaggcctgcagttcacg
gaggagtacagcaactctgttcagagcgtgttggccgtctatgaggcgcatcaaaagctg
ctggaggagctgggaggaacaaagagagaagcagagaacggggacgaggatccagagaaa
gcgagcaaaaccgccgacagctcttctgcacacgccgtatccagcgcatcaaatgtgccc
gtcaccacgccgccgctgcctcctgtcatgggcaccgacaccagcacccaggccgagtat
ggagcttacagcagctggtaccagcaacctcagtatggcagctacggcaactacggctac
cagaacacctggaactacaaccagggctactatccgcccagttaa
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