Girardinichthys multiradiatus (darkedged splitfin): 124860001
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Entry
124860001 CDS
T08099
Symbol
vimr2
Name
(RefSeq) low molecular weight neuronal intermediate filament
KO
K05640
glial fibrillary acidic protein
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124860001 (vimr2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gmu04812
]
124860001 (vimr2)
Membrane trafficking [BR:
gmu04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
124860001 (vimr2)
Cytoskeleton proteins [BR:
gmu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
124860001 (vimr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
TPR_MLP1_2
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
124860001
NCBI-ProteinID:
XP_047208899
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All DBs
Position
23:38516337..38538154
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AA seq
386 aa
AA seq
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MAMLRVSSYRKLFEDNRWSPNGGSRLQRAGLYRASGRRAAVDRSVCDKLDFGATSALNKE
GLDRFVQDRTTIAALNDRLVKLIELAHCLEEENNSLECQITDLEENLNGQHASPSITPTV
AMAECSLEAVVERLHKQRDEIVCDTEELKEELECLHKEYEKAVHQRVLVQQGQQNVAEVV
DAVTAECLALREQVAVYEEQLANMETQHKMEVESLLQPDERALATAAIRFGSPDITPALD
VKEYHCQLAESLQMEFGTPACGEGDGKKMEMGQTDGSVVKDPTEITDVDEVKALISELQK
ELNELEKNNEELLDEVEVKRDAYMDEVAELEFTITEMKQQKADLKSQMKEQCQEYKELLT
EKMARGMEIAAYRSLVEEEEVRLCSL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggccatgctcagagtgtcttcttaccgcaagctgtttgaggacaaccggtggagtcca
aacggagggtcgaggttgcagcgtgcaggactttatcgggcctctggcaggcgtgcagct
gttgacaggtctgtctgtgataaattagacttcggagcaaccagtgctctgaacaaagag
ggtctggaccggtttgtccaggaccggaccaccatcgctgcccttaacgaccgcctggtc
aaacttattgagttggctcattgtttggaggaagagaataactctcttgaatgccagatc
actgacctggaggaaaatctgaacggtcaacacgcctcccccagcatcacccccactgta
gcaatggcagagtgcagtttggaagccgtggtggaaagactacacaaacagagggatgag
attgtttgtgacacagaggaactgaaggaagagcttgaatgtctacataaagagtacgag
aaggctgtacatcagagggtcctcgtacagcaggggcaacaaaatgttgcagaggtggta
gatgctgtgacagcagagtgtttggcgctgagggagcaagtggctgtctacgaggaacag
ctggccaacatggagacccagcacaagatggaagtggagagcctgctgcagccagatgaa
agggctctggctacagctgcgattaggtttggcagccctgacatcactccagccttggat
gtaaaggagtaccactgccagctggcagagagcctccagatggagtttgggacacccgcc
tgtggtgaaggtgatggaaagaaaatggaaatgggacaaactgatgggtcagtggtcaaa
gacccaacggagataaccgatgtggacgaggtgaaggctctgatttcagagctgcagaag
gagcttaatgagcttgagaagaataatgaggagttgctggatgaagttgaggtgaagagg
gatgcttacatggatgaggttgcagagttagagtttactataacagaaatgaagcagcag
aaggctgacctcaaatcccagatgaaagagcagtgccaggagtacaaggagctgcttact
gagaagatggcaagaggcatggagatcgcggcctacaggagtctggtggaggaagaggag
gtgagactgtgcagcctgtga
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