Girardinichthys multiradiatus (darkedged splitfin): 124860474
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Entry
124860474 CDS
T08099
Symbol
clp1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124860474 (clp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124860474 (clp1)
Enzymes [BR:
gmu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
124860474 (clp1)
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
124860474 (clp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
MMR_HSR1
ATP_bind_1
TniB
AAA_22
nSTAND3
CbiA
AAA_16
Motif
Other DBs
NCBI-GeneID:
124860474
NCBI-ProteinID:
XP_047209783
LinkDB
All DBs
Position
23:27866624..27869641
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AA seq
441 aa
AA seq
DB search
MAAEGVEKTSEDASSSGKVCTRFDLEKETELRFEVEAGEAVDQVELELLTGMAEVFGSEL
NRNKKYIFGPGSKIAVFTWQGCSVNLYGKPEVAYVSKDTPMLLYLNTHAALEQMRKQAER
ENERGPRVMVVGPTDVGKSTVCRMLLSYAVRVGRRPTLVELDVGQSGVSVPGTVSALCIE
RPADVEESFSVQAPLVYHFGSTTPGTNIKLYNKLTSCLAEVFSQRCEVNRKASVGGCIIN
TCGWVKGSGYQALVHCASTFQVDVVLVLDHERLYNELKRDLPHFVRVVLLPKSGGVVERS
KECRRDARDEKIREYFYGFRGLSFFPFSFEVRFSDVRIYKIGAPSIPDSCLPLGMSQDDT
QLKLVPVTPGRDLTYHVLSVSSVEDGVEDARKSIVESPVCGFIVVTNVDTQTQVMKVLSP
APRPLPRHTLLIMDIRFMDMK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagagggtgtggaaaagaccagtgaagatgcttcatcttcggggaaggtgtgc
accaggttcgacctggagaaggagaccgagcttcgtttcgaggtggaggccggagaggca
gtggatcaggtggagctggagctcctgacgggcatggcagaggtgtttgggtctgagctc
aaccgcaacaagaagtacatctttggaccaggctccaagatcgcagttttcacctggcaa
ggctgcagtgtgaatctttacggaaagccagaggtggcctatgtgtccaaggatactcct
atgctgctctacctgaacactcatgctgccctggaacagatgaggaaacaagcagagcgg
gaaaatgagagagggcccagagtgatggtggtgggacctacagacgtggggaagtccaca
gtgtgccggatgcttctcagctatgctgtgagagttggaaggagacctacattggtggaa
ctggatgttggacagagtggggtttctgttccagggacagtatcagctctgtgcatcgag
cgtcctgcagatgtggaggaaagcttctctgtccaggctcctttggtgtatcattttggt
tctactactcctggaaccaacatcaaactttacaacaagctgacatcgtgcctggcagag
gtgttctctcaacgctgtgaggtaaacaggaaggccagtgttggaggctgcatcatcaac
acttgcggctgggtgaagggttctgggtaccaggctctggtccactgtgcctccaccttt
caggtggacgtggtgcttgtgctggaccacgagcggctctacaatgaactcaaacgggac
ctgcctcacttcgtgcgcgttgtcctgctgccaaagtccggaggagtggttgaacgctct
aaggagtgccggcgagatgctcgggatgaaaagattcgggagtacttctacggcttccgc
ggactgtccttcttccctttctcttttgaagtgcgattctcagatgttcgcatctacaag
ataggggcgccgtccatcccggactcgtgcttgccactgggaatgtctcaggatgacacg
cagctgaagctggtgcctgtgactccaggaagggacctgacgtatcacgtgctgagcgtg
agcagcgtcgaagacggagtcgaagacgccaggaagagcattgtggagagccctgtgtgc
gggtttattgtggtgactaacgttgacactcagacacaggtgatgaaggtgctgtcgccg
gcacccaggccgctgcccagacacacgctgctcattatggacatccgctttatggacatg
aaatga
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integrated database retrieval system
