Girardinichthys multiradiatus (darkedged splitfin): 124860544
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Entry
124860544 CDS
T08099
Symbol
polr1a
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124860544 (polr1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmu03021
]
124860544 (polr1a)
Enzymes [BR:
gmu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124860544 (polr1a)
Transcription machinery [BR:
gmu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
124860544 (polr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
CheX
SURF2
HMG_box_2
CDC45
Nop14
Motif
Other DBs
NCBI-GeneID:
124860544
NCBI-ProteinID:
XP_047209897
LinkDB
All DBs
Position
23:complement(10499171..10538277)
Genome browser
AA seq
1683 aa
AA seq
DB search
MLFSKEVPWRRLEGMSFGLYSTEEIRKLSVKAITNFRFLDAVGNVAQNSLYDLALGPADI
KEVCSTCCQDFNNCPGHLGHIELPLPVYNPLFFDKLYLLIRGSCLACHMLTCPRGAIHLL
VNQLRLVDSGAMQEVYLVESILNQHLDENPKATGDEMEQVLREFTNTIVGANTKASQNSK
PIKHLVEKKSSLINDFWRVQMKTRKCPYCRGGRSTVRREHNSKLIVTMPTGAQTGETTED
LLAGNRVFLTASTAREHINKVWEKEGFFLKSLFPGLEESTGSEEQKDFYPDLFFLELLVV
PPCRYRPINRLGDKMFTNGQTVNMQSVMKDCGVIRKLLALIAGEKHAEEEETLESEDQTF
LSGVTGQTLPDKLYNMWIRLQSHVNIVFDSDMDNLMTDKYPGIRQILEKKEGLFRKHMMG
KRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVLNGPNVHPGA
SMVINEDGRKTILSATNLTQREAVAKQLLTPSPGPHKMPMKIVNRHIKNGDVLLLNRQPT
LHRPSIQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYTLVSTN
QQYLVPKDGKPLAGLIQDHMVSGTKMTIRGCFFTKDQYTELVYRGLTDRAGRVKLLPPTI
LKPQQLWTGKQVVSTLLLNIIPVKAVPLNLIGKTKIPGKAWIQFPPRSAPGYKPESMCES
QVVIRQGELLVGVLDKAHYGSSAYGLVHCCYELYGGETSGKLLSCLARLFTAYLQLYRGF
TLGVEDILVTPGANMHRTKIIEESLKIGTKALQAAFRLPPNVDPAEARSRWQDAHLSPDQ
RDFSMADHKFKEVANQVNNEINKVCMPVGLHTRFPDNNLQLMVQSGAKGSTVNTMQISCL
LGQIELEGRRPPLMPSGKFLPCFQPYDPSPGAGGFVSGRFLTGIKPQEFFFHCMAGREGL
VDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVIQFLYGEDGLDIPKTQFLQPR
QFPFIEDNYEVIRRSQDLDNVLANLDPHTATRHFATIQRWKAKREMACARRGAFLLFSQK
KLAKLREANQTTERFYNQDPALLQLVEDWHSLDEAMKAKYSRRSSRCPEPSLGLFRPDVC
FGSVSENFHNITEKYLQNRSNQTEHCMETQRLRQLLHYKWQRSLCDPGEAVGLLAAQSIG
EPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASSNIKTPMMSVPVLNTKKAFKRAKT
LRKQLTRVCLAEVLQKVDVVETLRIESYQKLRSFKVTFHFLPPKRYRDDKLLTPHQILRY
METRFFRLLLEAIKKRTAKLASIAVETRKTTSRDKDLDGPGTAGLDDGEAEGEQETVDDQ
GEEGDADASDAKRKSKQEEEVDYESEDEDEGDDAGDDQGDEEAEENSKLNTMEESQPELT
EVSVDTRKKRAKTGKGEDSSFHMRVNSVLLSNPAIQKYSFDQQEELWCEVELNLPVSSVH
FDLTSVLSTLAQNAVIMETRGLTRCLLSETTTMSGEKQTVLNTEGINMHEIFKYSDILDI
NKLYSNEVHAMASTYGIEVALKVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGIYKPL
NRHAIMSNSSPLQQMTFETSYKFLKQATMLGSHDQLASPSACLVVGKVVRGGTGLFDLKQ
PLQ
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atgttgttttctaaggaggtgccatggcggcgcttagagggcatgtcgtttggcttgtac
tcaaccgaagaaataaggaagttgagtgtgaaagccatcactaacttcaggttcctggat
gctgttggaaatgtggcccaaaacagtttgtatgatctggctctggggccagcagacatc
aaagaggtttgttcaacctgctgtcaggatttcaataactgcccaggacacttgggacac
atagagctgcctctaccagtatacaacccactgttctttgataaactctacctgctgatt
cgcggttcgtgtctggcgtgtcacatgttgacgtgtcctcgaggcgccatccacctgctg
gtgaaccagctcaggttagtggacagtggagccatgcaggaggtctaccttgtggagagc
attctcaatcagcaccttgacgagaatcccaaagctacaggagatgagatggagcaggtg
ctgagggagtttaccaacacgatagttggagcgaacaccaaagcttcacagaactccaaa
cctattaaacatctggttgagaagaaaagcagtctgataaatgacttctggagggtccag
atgaaaacaaggaagtgtccttactgcagaggtgggaggtcaacggtgcgtcgtgaacac
aacagtaagctgatcgtcaccatgccaacaggagcacagactggtgaaaccacagaagat
ctgctggctggaaacagagtcttcctgactgccagtacagccagagagcacatcaataaa
gtctgggagaaagaaggtttcttcctgaagagcttgtttcctgggttggaggagagcacg
gggtcagaggaacagaaggatttctatcctgacctcttcttcctcgagctgctggtggtc
cccccttgcaggtatcgtccgatcaatcgactgggcgacaagatgttcaccaacggtcag
actgttaacatgcagtctgtgatgaaggattgtggagtcatcagaaaacttctggccctc
atagcaggagagaaacatgctgaggaggaagagacattggagtcagaagatcagacgttc
ttgtcgggcgttaccggacagacgttaccagataaactctataacatgtggatccgcctg
cagagccacgttaacatcgtttttgacagtgacatggacaacctgatgacggacaaatac
cctgggatcagacagatcctggagaaaaaggagggattgttccgaaaacacatgatgggc
aaacgagtggattttgctgcgcgctccgtcatttgtcccgacatgtacatcggaacaaac
gagattggaatacccatggtgtttgccaccaagctgacctacccacagcccgtcactcca
tggaatgtgaaggagcttcggcaggccgttctcaacgggcccaacgttcaccccggcgcc
tcaatggtgataaatgaagacggcaggaagaccatcctgtcagccaccaacctcacacaa
agggaggcagttgccaagcaactgctgacgccctctccaggtccacataagatgcccatg
aagatcgtgaatcgtcatataaagaacggagatgttctgctactgaacagacaaccaacc
ctgcatagaccctccattcaagcccactgtgctcgcatcttaccaggagagaaggtactg
aggctccattatgccaactgcaaggcgtacaatgctgactttgatggagacgagatgaac
gctcacttccctcagagcgagctgggccgagcagaggcctacacattagtcagcacgaac
cagcagtacctcgtccccaaggatggtaaacctttagcaggcctcatccaggaccacatg
gtgtcaggaacgaagatgaccataaggggctgcttcttcaccaaagaccagtatacagag
ctggtgtacagaggactgaccgacagagcaggccgggtcaagctgctgcctcccaccata
ctcaaaccacagcagctgtggacaggaaagcaggtggtgtccactctgttgctgaacatc
atcccggtgaaagctgttcctcttaaccttattggcaagacaaaaatccccggcaaggcg
tggatccagttcccccctcgttctgctcctggatacaaaccagaaagcatgtgtgagtca
caggtggtgatccgtcagggtgagctgttagtcggtgttctggacaaagctcactacggc
tcctcagcctacggtttggtccactgctgctatgagctgtacggaggggagaccagtgga
aaactgctcagctgcctggctcgcctgttcacggcatacctgcagctctacagaggcttc
accctgggagtagaagacatcctggtgacacctggagccaatatgcacaggaccaaaatc
attgaagagtctttgaaaattggcaccaaggccctccaggctgccttcagactgcctcct
aacgtggatccagctgaagctcggagtcgatggcaggacgctcacctgagccccgaccag
agagacttcagcatggccgaccataaattcaaggaagtggccaaccaagtgaacaatgaa
attaacaaggtgtgcatgcctgttggactgcacacccggttcccagacaacaacctccag
ctcatggtgcagtcaggagccaagggatccactgtaaacaccatgcagatctcctgtctg
ctgggtcagattgagctggagggccgtaggcctccactgatgccttcaggaaaatttctg
ccttgcttccagccgtatgacccttcacccggcgcagggggcttcgtttccggacggttc
ctcacaggaattaagccacaggagtttttcttccactgcatggctggcagagaaggactg
gtggacacggctgtgaaaacatcccgatcaggatatctgcagagatgcatcataaagcac
ctggagggtttggtagtgcagtacgatctgaccgtcagggacagcgacggatctgtgatc
cagttcctgtacggggaagacgggttggacatccccaagacccagtttctgcagccaaga
cagttccccttcattgaggacaactatgaggtcatcaggaggtctcaggacctggacaat
gttctggctaatttggaccctcacactgcaactcggcattttgcaaccattcagcgctgg
aaagcaaagagagagatggcatgtgctcggagaggagcctttttactgttttcccagaag
aagttggcaaaactaagagaggccaaccaaacaacagagcgattttataaccaagatcct
gcattgctgcagttagtggaggattggcactctctggatgaggccatgaaagccaaatac
agcagaagatcgtcccgctgccctgagccctccctgggcttgtttagacccgatgtctgc
ttcggatcagtgtctgaaaactttcacaacatcacagagaaataccttcagaacagaagt
aaccaaacggagcactgcatggagacccagagactgcgccagctgctccattataagtgg
cagcgttccctgtgtgacccgggtgaagctgtgggtctgctggccgctcagtccataggc
gagccctccacccagatgaccctcaacaccttccactttgctggcagaggagagatgaac
gtcactttgggaatccctcgactgagagagatcctgatggtggccagttccaacattaaa
acccccatgatgagtgtcccagtgctgaacaccaagaaagccttcaagagagccaagaca
ctgcggaagcaactcaccagagtctgcctggctgaggtgctgcagaaggtggacgtggtt
gagacacttcgaattgaaagttatcaaaaactgcgatcttttaaagtcacctttcacttc
ctgcctccgaaacgttaccgtgacgacaagctgttaactccccatcagattcttcgctat
atggaaacaaggttcttccgtctcctcctggaagccattaaaaaacgcaccgccaaacta
gcctccattgccgtggagacaagaaaaaccacctctagggataaagacctggatgggcct
gggacagcagggttagatgatggagaagctgagggagaacaagagactgtggatgaccag
ggggaagaaggagacgctgatgcatcagacgccaagagaaagagcaaacaggaagaggag
gtagactatgaaagcgaagatgaggatgaaggcgatgatgcaggagatgatcagggggat
gaggaggctgaggagaacagcaagttaaacaccatggaggagtcccagcctgagctcaca
gaagttagtgtggacacgaggaagaagcgagccaaaacggggaaaggagaagactcctcg
ttccatatgagagtgaattcggttctgttatcaaacccggccatacagaaatattccttc
gatcagcaggaagaactctggtgtgaggtggagctgaacttacctgtgagcagcgtgcac
ttcgacctgacctcggtcctgtcgaccctggcccaaaacgcagtcatcatggagaccagg
ggtctgacacggtgcctgctgagtgaaaccacaaccatgtctggggaaaaacagacggtt
ctcaacacagagggcatcaacatgcatgaaatcttcaagtacagcgatatcctggacatc
aacaagctttactccaatgaggtccatgccatggccagcacctatgggattgaggtggct
ctgaaagtcatagagaaggagatcaaagatgtctttgcagtctatggtatcgaggttgac
cccaggcatctgtcactggtggcagattacatgtgttttgaaggcatctacaagccttta
aaccggcacgccatcatgtcaaactcgtcacctctgcagcagatgaccttcgagaccagc
tacaaattcctcaagcaggccaccatgctggggtcacatgatcagctggcatctccctca
gcctgcttggtcgtgggaaaggtagtcagaggtggaacaggattgtttgacctgaaacag
cctctgcagtag
DBGET
integrated database retrieval system
