Girardinichthys multiradiatus (darkedged splitfin): 124860688
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Entry
124860688 CDS
T08099
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124860688 (rlim)
Enzymes [BR:
gmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124860688 (rlim)
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124860688 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
SPT6_acidic
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
124860688
NCBI-ProteinID:
XP_047210146
LinkDB
All DBs
Position
23:22906960..22912889
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AA seq
746 aa
AA seq
DB search
MEGSDSVEQGSGDQPESQRRRQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGNPGEVT
EDELFNRLQQIKDGPEQQNNNPSTENSEDPVETPESSEDSQGGDSLLDWLNTVRRTGNTT
RTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQGPSEQSPAGQDEGV
ADPEPQVPMETEVVEEPVVEELAVIVEPEPEEIAEEEVASQEAVEEPPSPAPPPAPAPPL
APAPGPVAAPAPVAAPTPVAAPAPAPVAAPIAAPAPAPVAAPVAAPAPVAAPVSAPAPAP
VAAPVAAPVAAPAPAPVAAPVAAPAPALVAAAASPEQPPPCSSPRRGQRRPRSRSPEPRR
TRARLARSRSPLRLDHLDGVSSPRHMYGSQSPSSSTDTPPVPQVEGSSRTRQHILSRQNP
VDDNVQPPSVETESVPEAQNVRPQEGESNGNEGGSAERRPPTIMLDLQVRRVRPGEYRQR
DSIASRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGE
ATSMALQSMIRQIMTGFGELGYLMDSDSDSTDSNRGTGTPADTETLNNPDASNADVSAAD
EQPAVPAPGARERTVETDVDEGLATGPQASGGRARPRPPISLEEPSSLPFLRLAHFFLLN
DDDDDQPQGLTKEQIDNLAMRNFGESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCID
RWLSENSTCPICRRAVLVSANRESVI
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtctgacagcgtagagcaaggcagcggtgaccagccagagtcgcagcgccga
aggcagttggatcgtctggacagagaagaggccttttatcagttcgtcaacaatctcagt
gatgaggactatcgccttatgagagacaacaatctcttgggcaatccaggagaggtaact
gaggatgagctgtttaatagacttcaacaaatcaaagatggtccagagcagcagaataac
aacccaagtactgagaacagtgaagatcccgttgaaactccagagagctccgaggattcc
caaggtggggatagcctgctagactggctaaacacagtgagacggaccggcaacacaact
agaaccggacatcgcggaaaccagtcttggcgggctgtgagccagacaaacccaaacagt
ggtgattttcgctttagcctggagatcagtgtgaaccgcaacctggctgaacagcaggca
gcagctgaaggggagcaggggccttcggagcagtcgccagcaggccaagatgaaggggtt
gcagatcctgagccacaggttcctatggagacagaggtggtggaagaaccggttgttgaa
gaattagctgtcattgttgagccagaacctgaagaaatagctgaggaagaggttgcttca
caagaagctgtagaggagcctcccagtccagctccacctccagccccagctccacctcta
gccccagctccaggtccagttgcagctccagctccagttgcagccccaactccagttgca
gccccagctccggctccagttgcagctccaattgcagctccagccccagctccagttgca
gctccagttgcagccccagctccagttgcagctccagtttcagctccagccccagctcca
gttgcagctccagttgcagctccagttgcagcaccagccccagctccagttgcagctcca
gttgcagctccagccccagctctagttgcagctgcagcctcaccggagcaacccccacct
tgttcttctccacgaaggggacaacggagaccccgcagtcgtagcccagaaccacggagg
acaagagcccgtttagccagaagccgctcacctctccgattggatcacctagatggtgtg
tccagtccacgacacatgtatggctctcaaagccccagttcttccactgacacacctcca
gtgcctcaagtggagggcagttctcggactcgtcaacatattctctccaggcaaaaccca
gtagacgacaatgttcagccacccagcgttgaaacagaatccgtccctgaggcccagaat
gtcagacctcaggaaggggagtctaatgggaatgaaggaggctcagcagagcgacgtccc
cctactataatgctcgatctgcaggtgcgtcgtgtgcgtccgggtgaatatcggcaaaga
gacagcattgccagccgcacccggtcacgctcgcagaactccaacaacacatttctctat
gagagcgagcgaggtggttttcgcaggaccttctcccgctctgagcgtgctggggtgagg
acctacgtcagcaccattcgaattccgattcgtaggatttccgatgcagggttaggagag
gcaacatcgatggctctccagtctatgataaggcagatcatgacaggcttcggcgagcta
ggctacctcatggactccgactcggattctacagattcaaaccgcggtaccgggacaccc
gcagacacggagaccctcaacaatccagatgctagtaatgctgatgtgtctgctgctgac
gagcaacctgctgttcctgctcctggagccagagaaaggacagttgagacggatgtggat
gagggtcttgccaccggcccacaggcttcgggaggtagggctcgacctagacctcccatc
agcctagaggagcccagctcactgcccttcctccgacttgctcacttcttcctgctgaac
gacgacgatgacgaccagcctcaggggctgaccaaagaacagattgataaccttgctatg
cgcaacttcggtgagagcgacgccttgaagacctgtagcgtctgtataacggagtacgcc
gagggaaacaagttacgcaagcttccctgttcccatgagtaccatgtgcactgcatagac
cgctggctctctgagaactctacctgccccatctgtcgcagggctgtcctggtatcagcc
aaccgagagagcgtgatctaa
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