Girardinichthys multiradiatus (darkedged splitfin): 124860784
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Entry
124860784 CDS
T08099
Name
(RefSeq) integrin alpha-6-like isoform X1
KO
K06485
integrin alpha 6
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04382
Cornified envelope formation
gmu04510
Focal adhesion
gmu04512
ECM-receptor interaction
gmu04514
Cell adhesion molecule (CAM) interaction
gmu04518
Integrin signaling
gmu04810
Regulation of actin cytoskeleton
gmu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124860784
04514 Cell adhesion molecule (CAM) interaction
124860784
04518 Integrin signaling
124860784
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124860784
09142 Cell motility
04820 Cytoskeleton in muscle cells
124860784
04810 Regulation of actin cytoskeleton
124860784
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
124860784
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmu04147
]
124860784
04515 Cell adhesion molecules [BR:
gmu04515
]
124860784
04090 CD molecules [BR:
gmu04090
]
124860784
Exosome [BR:
gmu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124860784
Exosomal proteins of breast milk
124860784
Cell adhesion molecules [BR:
gmu04515
]
Integrins
Integrin alpha subunits
124860784
CD molecules [BR:
gmu04090
]
Proteins
124860784
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
MFS_Mycoplasma
DUF11
Polyketide_cyc
Motif
Other DBs
NCBI-GeneID:
124860784
NCBI-ProteinID:
XP_047210309
LinkDB
All DBs
Position
23:34589438..34608399
Genome browser
AA seq
1050 aa
AA seq
DB search
MAKHWCMVSLWIVYSLLVLNVAAFNLDTQNVLLKQGDPGSLFGFSVAFHQQLSPARRNLL
LVGAPRAKHQNQVNVTGVVYSCDLNSTSDRCQPIEFNNKEFLTSKGINNQWMGVKVTSQG
PGKNVLACAHRYQEGSSSRYVPHVLTGQCYLLGDNLQVGEEERRWRRVVCDFEHLSRRQK
DHEWFAYCQQGHGASFAKDNTSLLIGAPGAYQWKGIVRMERLDDLDFDSEEPRETGDIEQ
FNHKLIPLQRNSYLGFSVDSGMALLKQGELTIVSGAPRGGYSGQVAFLKTDPVARRNLSV
ELVLSGPGLASSFGYDVAVLDLNNDGWEDLAVGAPEFFVKDSMIGGAVFIFINTKGKHWE
KIVPIELHGNKESMFGLAVENIGDINRDGYGDIAVGAPYDDSGRVYLYCGSPEGINRKPA
QILSPGLKTVNLFGYSLSGNLDMDNNQYPDVAVGSLSDHVFIFRAKPVVSLSSSLQITPN
QIDIKKKRCSERTCYFAGQACFTYMSHPASFNPNLMLNYTFEADFGQKRSRPRVILQGSS
QGKLELSAQRKQICTRMKLQLLREIVDKLRSIPVSVTVSLWNSTETTSVSSDQSNMYPVL
NIYQQSTTVTEITLMNQGCGSDNICQSNVQLHYKFCSKMTQNDRNIFKSLVRDEGVAVIT
PSDEEIALEITVTNRNGDDAHQCHSVIILPDTVRYSSVLFSVAEEDIGCTANGNGTLIDC
DLGNPLRRDTEVTFYIMLTTSGISLNTTVVNVTLQLETTSVQPIQLIEASAKVVFELELQ
VNGLLRPSQVSLGDIMKGESAINSANDIGPSVQYEFRITNLGRPLKSFANASLNINWPKE
NSVGKWLLYLVHIHSEGVHTVPCTPVDEVNPLKLVKGWDAPPRKRREAKLESSSTEGLSI
IPSRRKYKTLTCSDGMGCVQIRCPLLGLDSTARVVLHSRLWNTTLAEDYSSLNYLDIVVE
ASLSLSSSFENIGLKSIRPVTQVKLTVFLERKVKFLTKVAWWIIFLTVLSLLLCLGFIVY
LLWKRDCIRGLAHKNKQSHDQKAEMAPLKG
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacattggtgtatggtgtccctgtggattgtctacagtcttctggtcttaaat
gttgcagcattcaacctggacacccagaatgttctgctaaaacaaggagatccaggctct
ttgtttggattttctgttgctttccaccaacagctgagccctgccagaagaaatctattg
cttgtgggagctccacgtgcaaaacaccagaatcaagtgaatgttacaggagttgtttac
agttgtgatctgaattcaacatctgaccgctgtcaacccatcgagtttaacaataaagaa
tttctcactagtaaaggcataaacaaccagtggatgggagttaaagtcacaagtcaaggt
cctggtaaaaacgtattggcttgtgctcaccgatatcaggaggggagttcaagccgctac
gtccctcatgtacttactggtcagtgctacttattaggagataacctgcaagttggggag
gaagaaaggaggtggaggagggtagtttgtgactttgaacacctgagtagacggcaaaag
gaccatgagtggttcgcatactgccaacagggtcatggagcatcttttgcaaaggataac
acttcattgctaattggagcaccaggagcttaccagtggaaaggaattgtacgaatggag
cgtttggatgacctggacttcgacagtgaagagcctcgtgaaactggagatatcgaacag
tttaaccacaaactcattcctctccagagaaacagctacctggggttttctgtagactct
gggatggccctcctcaaacagggtgagctgacaatcgtatcaggagctccccgagggggt
tacagcggccaggtggcattcctgaagacggaccctgtggccaggagaaatctctctgtg
gagctggttctgtcaggaccgggtctggcctcatcctttggttacgatgtggcagtgctg
gatcttaataatgatgggtgggaggatcttgctgtaggagctccagagttctttgtgaaa
gacagcatgatcggaggagcggttttcatctttattaacaccaaaggaaaacactgggag
aaaattgttcccatcgaacttcatgggaacaaggagtccatgtttggccttgcggtggaa
aatataggagacatcaaccgggatggttatggagatattgcagtgggggcaccgtatgat
gactctgggcgagtttatctttactgtgggtcacccgagggtatcaacagaaaaccagca
cagatactttcaccaggattgaagacggtgaatctatttggatattctctgagtggtaac
ctggacatggataacaatcagtaccctgatgtggctgtaggatcactttcagaccacgtt
tttattttcagagcaaagccagtggtcagtctgagctcctctcttcagataacaccaaat
caaatagatataaagaagaaaaggtgcagtgaacggacgtgttattttgcaggtcaggct
tgctttacttacatgtcacatccagcatcttttaacccaaacctgatgctcaactacact
ttcgaggctgactttggtcagaaaaggtccagacccagagtgatcctccaaggctcctcc
caaggaaaactggaactctctgcacaacgaaaacaaatctgtactcgtatgaagctccaa
cttctgagagaaatcgtcgacaaactgcgaagcatccctgtctctgtgacggtgtctttg
tggaactccacggagacaacctcagtgagttcagatcagtccaacatgtatcctgtcctg
aacatttatcaacagagcactactgtgactgagatcactctaatgaatcagggttgtggc
agcgacaacatctgccaaagcaatgtacaattacactacaagttctgttcaaaaatgaca
caaaatgaccgaaacatttttaaatcacttgtcagagatgaaggtgttgctgtcatcact
ccttctgatgaagaaattgctttggagattactgtgactaacagaaatggggatgatgcc
catcagtgtcactcagtcatcattctcccagatacagtgcgctactcatcagttttgttt
agtgtagcagaggaagacatcggctgcacagctaatggcaatggaacgctgatagactgt
gatctaggaaatcctctccgaagagacactgaggttacattttacatcatgctaacaact
tctggcatctcactgaatacaacggttgtcaatgttaccctgcagcttgaaacaacaagc
gtacagccgatacagctgattgaggcttcggccaaagtggtttttgagctggagctgcaa
gtaaatgggctactcaggccctcacaagtttccctcggtgatattatgaagggggaaagt
gccataaattcagcaaatgatatcggcccatcagttcaatatgaattcaggattacaaac
ttgggcaggccactgaagtcttttgcaaatgcatcactcaacatcaactggccaaaagag
aactcagtaggaaaatggcttctgtacttggttcacatacacagtgaaggagttcacact
gtcccctgtacacctgtagatgaggtcaacccactcaaactagtgaagggttgggatgct
ccacccagaaaaagacgtgaagctaaacttgaatcttcctcaactgaaggcctttcaatt
attccatcaagaagaaaatacaaaactttgacttgctctgatggaatggggtgcgtgcag
attcgctgccccctgctgggtcttgacagtactgcaagggtagttctgcactctcgcctt
tggaacacaacgctggctgaggattacagctccttgaattacctcgacattgttgtggaa
gcttctctgagcctaagcagctcttttgagaatattggacttaaatcaataagaccggtg
actcaggtaaagctgacggtgttccttgaaagaaaggttaaattcttgaccaaagttgcg
tggtggatcatcttcctgacagtcctgtctctgttgctgtgtttgggttttattgtctac
ttattatggaagcgggattgcatccgcggcctcgcccataaaaacaaacagtcacatgat
caaaaagcagagatggctcctctcaaaggctaa
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