Girardinichthys multiradiatus (darkedged splitfin): 124860954
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Entry
124860954 CDS
T08099
Symbol
ssrp1a
Name
(RefSeq) FACT complex subunit SSRP1a isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmu03000
]
124860954 (ssrp1a)
03036 Chromosome and associated proteins [BR:
gmu03036
]
124860954 (ssrp1a)
Transcription factors [BR:
gmu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
124860954 (ssrp1a)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
124860954 (ssrp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
DUF1583_N
DUF7493
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
124860954
NCBI-ProteinID:
XP_047210520
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All DBs
Position
23:28016462..28034654
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AA seq
711 aa
AA seq
DB search
MGDMLEFNDIYQEVKGSWNDGRLRFSKQNVVYKSNKTGKVDSIPAGELNLAQWRRVCLGH
GIKLGTSTGHIYKYDGFRDTDFDKISEFFKVNYKLELSEKDLSVKGWNWGTAKFSGPQLS
FDVNDNTAFEIPLSNVSQCATGKNEVTLEFHQNDDTEVSLMEVRFYVPPSQTDERQDPVE
AFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDINLTLNMSEEDVEKRFE
GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLNIKNRGFKEKKGMKGKIDEYSDSDDDQHDAYLERMKAEGKIREEGNDSDDSDGSGS
DESFNPGEEDEEIAEEYDSNASASDSSEEGDDSEEERAKKKKAKNTKVVKEKKERKPRKE
KKQKDSGGPKRPMSAYMLWLNSSREHIKAENPGISITEISKKAGEMWRQLNKNEKEEWET
KAGEAKKQYDKLKKEYKESGGGSASSPKKEKRKSVGKKDEKKRKSSGGEKEKERGGNDSF
KSREFIETSEDSSSDSDHKSKSKKKKKKKESEDEEEEEAVSTPASSEEESD
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgggggacatgctggagttcaacgatatctaccaggaggtcaaaggctcctggaatgac
ggacggctgcgtttcagcaaacagaatgtggtttataagagcaacaagacggggaaggtg
gacagcatcccagccggagagctcaacctggctcagtggagacgagtgtgtttaggccac
ggcatcaaacttggcacgagcactgggcacatctacaaatatgacggtttcagggacacg
gactttgacaagatatcagagttttttaaggtgaactacaagctggagctgtctgagaag
gacctgtctgtgaagggctggaactgggggacggccaagttctcaggaccccagctgtcg
tttgacgtcaatgacaacacagcgttcgagatccctctgtccaacgtttcccagtgtgcc
acagggaagaacgaagtcacactggagtttcaccagaatgatgacactgaggtttctctc
atggaggtccgattctacgtcccacccagccagaccgatgaacgacaggaccctgtggag
gcgtttgcccagaatgttttgtcgaaggctgatgtgattcaggccacaggagacgccgtt
tgtatcttcaaggagcttcagtgtctcacgcccagaggaagatacgacattcgcatctat
ccgactttcctccacttgcacggtaagacctttgactacaagattccctacaccaccgtc
ctccgtctcttcctgctgccgcacaaagatcagaggcagatgttcttcgtgatcagtctg
gatcctcccatcaagcagggtcagacgcgttatcacttcctcattctgcttttttctaag
gaagaggatatcaacctcaccctcaacatgagcgaggaggatgtggagaaacgcttcgag
ggcaaactcagcaaaaacatgtctggctctctctacgagatggtcagcagggtgatgaag
gccctggtcaaccgcaaaatcactgtacccggaaacttccagggccactccggcgctcag
tgcatcacctgctcctacaaggcatcttcaggtctcctctaccctctggagaggggcttc
atctacgtccacaagccccccgttcacctgcgctttgaggaaatctcctgcgtcaacttc
gccagaggcactaccacaacacgatccttcgactttgagatcgagaccaaacaaggaaac
cagtacaccttcagcagtattgagagagaggagtacggcaaactgtttgactttgtgaat
gccaagaagctcaacatcaagaacagagggttcaaagagaagaagggcatgaagggcaaa
atcgacgagtacagcgactcggacgatgaccagcatgatgcctatctggagaggatgaag
gctgagggaaagatcagggaggagggcaacgacagcgatgattcagatggaagtgggagc
gatgagtccttcaaccctggagaggaagatgaggaaatcgcagaagagtatgacagcaat
gcctctgcaagcgacagcagtgaagaaggtgatgatagcgaagaggagagggcgaagaag
aaaaaagccaagaatactaaagtcgtgaaggagaaaaaagaaagaaaaccacgcaaagag
aagaagcagaaggacagtggtggccccaaaaggccgatgagtgcctacatgctttggctg
aactccagccgggagcacatcaaggcagagaaccccggcatctccatcacggagatatcc
aagaaggccggagagatgtggagacagctgaacaaaaacgagaaggaggaatgggaaaca
aaggcaggggaggcaaagaagcaatacgacaaactaaagaaggaatacaaagagagcgga
ggaggatcggcctccagtcccaagaaagagaagagaaaatcggttggaaagaaggatgag
aagaagagaaagtccagcggtggagagaaagaaaaggaacggggaggcaacgacagcttc
aagagccgcgagttcattgagaccagcgaggatagttcctctgactctgaccacaagagc
aagtccaagaagaagaagaagaagaaggagtcagaagatgaggaggaggaagaagctgta
tccactcctgccagctcagaggaagagtctgactga
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