Girardinichthys multiradiatus (darkedged splitfin): 124861213
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Entry
124861213 CDS
T08099
Symbol
rp1l1a
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gmu03037
]
124861213 (rp1l1a)
04812 Cytoskeleton proteins [BR:
gmu04812
]
124861213 (rp1l1a)
Cilium and associated proteins [BR:
gmu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
124861213 (rp1l1a)
Cytoskeleton proteins [BR:
gmu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
124861213 (rp1l1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
DUF7406
Motif
Other DBs
NCBI-GeneID:
124861213
NCBI-ProteinID:
XP_047210699
LinkDB
All DBs
Position
24:16151414..16167441
Genome browser
AA seq
2425 aa
AA seq
DB search
MQSIQTGLRDPCPPCKHASPLPAPPPSSSRHAHVTTATPAKRITFYKSGDSQFGGVRMAI
HKRSFKCFDALLDDLSQKVPLPFGVRTVTTPRGTHTIKHLEQLQDGGCYLCSDRRLAKPI
NMELAGKRQGIWYHQSRKPQRPETSSGTPPGHLHLLHRQRRILLVKNTEPGMRRSIVLSR
SSTRSLRAFLDEVSEVMQFHVRKLYTAEGRRIDSVQSLMTCPVVLVCVGREAFSPMLINF
IRKTSEEKLPGLGSKSPGPGPRIPGNGARSPATQGIRSPPHGAQSRASEYDEGNETKKNV
NFGLETKKSIIHPRSGSSSRSARFSLSSEKSYGGFSQTRPAITNDDIEKRVLVNKDGSLS
IEMRVRFRLQNEETIHWSTQIKKSPSLTNDCCPLSQAQPHYLQQGASESCSDPDSPSYEG
VDYSSQALQCALEGNQCTCCYQKHERQFDLWENPTHKHLPAPPAHKSSHTMVRHTHSSSS
SSSCNSRRVIRCRAQLSRSPHGSGSEQSQLFQKEMCLTEQVEERVEVAQDGDTQVEVCKV
SRCCSRTEVVSIDTNLRPHSEKSVEGEVTMGEDENRPLSAVSSSSHILQSLKEDQDDEED
DLPPSASQCSHRIEQSPTPTPATHLGEEPTSNISACSTQSFEGKEKDENRGSRAVSSATS
HHCGATNPHSTGKAEEMDRVPSSMSQEAKNQKSEEEGTAAIDNEEINRCRSGLSHNTGLS
GSYQKSWASNICPNCGGCKRANSAMSAQTDLSAESNKSKYTAEALLIKSALEKEGQNTAA
RTASSLSNKSGASVKSHKSICLSVTKEVSLSNKTVVEEDDTDKRAHSSLSVKSNVTDKSG
KAKSVLSNKSDKSKVSAKSDLSCKQCAKALTPDNKEEDELNGIRKKREGSGVEDRTASAM
SAKSNLSSKSNKSHRFTKASEKSVSPRSETGEDAEESATSQMSCRLPFKPTKSCKCNDNG
KALSPDLKVGDNAEELPRQEIIMADDPEYDKRSSGAKSRKSASSAKSHNATEEFDRSPSV
TSERSHTSAKSTKLKRSNHPEECQNDPDLTLTETNGENEFEHCEDLESAKSIKSKSSVKS
GAISMTPLTTNAVIIKTPEGDDEDRNEVKGEPCSDILCIETSQACEEVDNYIIRGTFSID
PHGQTLSPKRKPSSRSHSASSRDSQSPVQKVLPSSGAGEQRGPSSLSVHSKTSCKVSRSR
CCFRTASALEMENKEEDRKSEEALSCSIKRQRKESGCMDQPLSRNSSGSISLGLPEDQET
AESDSGKSSVSFCNTKRKSPFLPNSPVVDIPTIETPRGGEEDNKESGEQPTERAASTMTV
KISGSHTSCCNCSVKSAAQSKEKSASSYPTKVDDTESVKSAETTNASKMDTPNSRSSSAM
SGPKVRAKSPSGFSSNTDAENHNTSRPQSKTKEKEYIISVHSKSPCDLRPESTASVQSDT
QKASDERIVAMDSVKSGVHKSHTGSEYGRAKVSSSGQKETSVKSSSPCSLHGPRPASKVE
PGSESTLSHSLSAADLLKETLAAARQQSCQSKASKTSNKPHSEKSGGSQRNRNRKDRENV
VELTPECLPNASANELVSDWLRSIPANSSMLTVGNELNEGETEQEAKEMAETPTEETGTK
EMSPEAEKVEIGEKIEPQEEEKKEEAKGDGAGPRLGDTTESSSRSRNWHSSAAVMKVLLS
SSLGRCWSMPEVSPVYGRRLSTSARGLLDCLAQLQLIEPAISSHEQKDRKQQYDEIMAIL
QSLWLTEPRDIEVKETKDSGTEQVTPPRSSSGVGMSSGSGGSGKSNGNQDEPPVKETESL
HEEETVGKVVDEEHGNAAARDTEVETDVEETNKTESAEEPMKSEEQSTLPLDSSKATDNP
SSSEKSSGNNSSKSPTDNERDTQEDSSSGTPPTATRPLLSKRLSQDPDPLWVLHLLKKLE
KQFISHYIEAMAEFKVRWDLDDSLILDKMISELREEVSRRIQNSIEREMRKIQSRAGKVG
RSPRPPQLANMSRDSTMTEKRRRILKVMKNQSIKTGDSLTDEEMTGDFSDQRSDDEYCPC
ETCVRKKMAAQPFKKNLLAAEAPIMMEFDLLKILQLKKCPLPPPTVPQPAEERTAADEEE
RNLEVVKEEEEEETKEDIKADVVLEETIPEEDEEEDQEKERGKIEQEKEKISIEEEDLEA
GETSGDVTEQDETSDNGDEEDKEQSTCQSESNNEEEGKAEETSSCTDDEGETEEDEKGQH
EETGTGEEEEEEEEESDTTVKEATTGEEEKESEDDTSVTKEEVTLVEELMEGNISASAEE
EDDGTGEEEPQEEEKQGESEKQEGEASEERASPQSQDAITAVCVTEGEEADAEDSDDSKR
HSDTSAEESAPEEAGGTGEEEVKGSREDGEEDAVEEFKPEQESKEQEAAESKNEDGTLLH
QFTRTSVESQPGSMEEVEMDLPSNS
NT seq
7278 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcaatccagacagggttgagggacccctgccccccatgtaaacatgcctcgccc
ctacctgcgccccctccttccagttcacgccatgcccatgtgaccacagccaccccagcc
aagaggataacattttacaagagtggcgacagccagtttgggggtgtccggatggccatc
cacaagcgcagcttcaaatgctttgatgccctgctggacgacctttctcaaaaggtgccc
ctcccatttggagtgcggactgtgaccactccccgaggcacacacaccatcaagcacctg
gagcagctccaagatggtggctgctacctgtgctctgaccggcgtctggcaaagcctatt
aacatggagctggccggcaaacgccaaggcatctggtaccatcagagccggaagcctcag
cggcctgaaacctcctctggaacccctcctgggcatttgcatttgcttcacaggcagagg
aggattttgctggtgaagaacactgagccggggatgaggaggagcattgtgctgagcaga
agttcaactagaagcctaagagctttcctagatgaagtgtccgaggtgatgcagtttcac
gttcgcaagctctacactgccgaaggacgcaggattgacagcgtgcaaagcttgatgact
tgtcctgtcgtgttggtgtgtgttggccgggaagccttcagccctatgctcataaacttt
attaggaagacttcagaggaaaagctacctggtctggggagcaagtctcctggtcctggt
ccaaggattcctggtaacggtgccagatctcctgcaacccaaggcataaggtccccacct
catggagctcagtccagagccagtgaatatgatgaaggaaatgaaaccaagaaaaatgtt
aactttggtctggaaaccaagaagagcatcatccaccctcgatcaggttcttcaagtcgc
tctgctcgtttctctttgtcttctgaaaaatcatatggtggcttctcccaaacaagaccg
gctataacgaatgatgacattgaaaagcgtgttcttgtcaataaagatggaagcctatca
atagagatgagggtacgttttcgtctccaaaatgaagagactattcattggtctactcaa
ataaaaaaatcaccctctcttaccaatgattgctgccccctgagccaggcccaaccacat
tacctgcagcaaggtgcctcagaaagctgttctgatcccgattcaccatcctatgagggc
gtggattattccagccaagctctgcagtgtgcattggaggggaaccaatgcacgtgttgc
tatcagaaacatgaacggcagtttgatttgtgggaaaaccccacacacaaacatctccct
gccccacctgcgcataaatcaagtcacactatggtgagacatacacactcatcaagctct
tcttcttcatgcaattccagaagggtgattcggtgccgagcacagctctccaggtctcca
catggctctggctcagagcagagtcagttattccagaaagagatgtgtctgacagagcag
gtggaggaaagagtagaggtagcacaggacggggacactcaggtagaggtctgcaaagtt
agccgatgctgcagtcggacagaggtggtttccattgataccaaccttcgaccacatagt
gaaaagtcagtggagggcgaggtaacgatgggggaagatgaaaaccgaccactgtctgca
gtcagcagctcctctcacattctgcaatcactgaaagaggaccaggatgatgaggaggat
gatctgccacccagtgcttcccagtgctcccatagaattgaacaatcccccacccctacc
ccagcaactcacttgggtgaagaacctacaagcaacatctcagcctgttcaacccagtcg
tttgaaggcaaggaaaaagatgagaacagaggaagcagggctgtgtcttcagccacatcc
catcactgtggcgcaaccaaccctcactcaacaggtaaagcagaagagatggatcgagtc
cccagttctatgtcccaagaagccaagaaccaaaaatctgaggaagaagggacagctgca
attgacaatgaagaaatcaacaggtgtcgtagtggcttatcccataatacaggactttca
gggagttatcagaaatcatgggcatccaatatttgcccaaactgtggaggttgcaaacgt
gcaaacagtgcaatgtcagctcagactgacttgtctgctgagtccaacaagtccaagtac
actgctgaagctctattaataaagtcagcattggaaaaagagggacagaacactgcagca
agaacagccagctccttgtcaaacaaatctggtgcctcagtcaagtcccataaatccatc
tgtctgtcagttactaaagaggtgtccttatcaaacaaaacagttgtggaagaagatgac
acagacaaaagagctcacagtagcctctctgttaagtcaaatgtcactgacaagtccgga
aaggccaaaagtgtcctgtcgaataagtcagataaatcaaaggtttcagcaaaatctgac
ttatcttgcaagcaatgtgcaaaagcgctaaccccagataacaaggaggaagatgaactt
aatggcataagaaaaaagagggaaggatctggagtggaggacagaacagcaagtgcaatg
tcagcaaaatcaaatctgtcttctaagtctaacaagtcccataggttcactaaagcttca
gaaaaatcagtttctcccaggtcagaaactggggaggatgcagaagaaagtgcaaccagt
caaatgtcttgcagattaccttttaagccaacaaaatcctgcaagtgtaatgataatgga
aaagcactgtctccagacttaaaggtgggagacaatgcagaggaattgcccaggcaagaa
attataatggcagatgatccagaatatgacaagaggtcaagcggtgccaagtcccgtaaa
tcagcttcctctgcaaaatctcacaatgcaactgaagaatttgacagatccccgagtgtc
acttcagaaagatcacacacctctgccaagtccaccaagttgaagaggtcaaaccaccca
gaagagtgtcagaatgaccctgatcttactttgactgaaacaaatggggagaatgaattt
gaacattgtgaggacctagagagtgctaaatctataaaatcaaaatcttcagtgaagtcc
ggtgctattagcatgactcccttaactacaaatgctgtcatcattaaaacaccagaagga
gatgacgaagatagaaatgaggtcaaaggagaaccttgctctgatatcctttgtattgaa
acatcacaagcctgtgaagaggtggataattatataataagaggtacattttctatagac
cctcatggccaaacactctcaccaaaaagaaaaccttcatcccgctcacattctgcctcc
tcaagagattctcagtcccctgtgcaaaaggttttgcctagctccggtgctggtgagcaa
agagggcccagttccttgtctgttcactccaaaacctcttgtaaagtaagcagatccagg
tgttgttttagaacagcctcagcacttgagatggaaaataaagaagaagacaggaaaagt
gaggaagctctgtcttgctcaataaaaagacagaggaaagaatcgggatgcatggatcaa
cctttgagtcgtaactcatcgggatcgatatctttagggctgccagaggatcaggaaact
gctgaatcagacagtggcaaatctagtgtctctttttgcaacactaagaggaaaagtcct
ttcctccccaattctcctgtggttgatatcccaactatcgaaacccccagaggaggtgaa
gaagacaacaaagagagtggggaacaacccacagaaagagcagccagcacaatgacagtc
aaaatcagcgggtctcatacatcctgttgtaactgtagtgtcaaatcggcagctcagtct
aaagagaaaagcgccagttcttatcccacaaaagtagatgatacagaaagcgtgaagtct
gctgaaacaacaaatgctagcaaaatggacaccccaaacagtaggagctcatctgcaatg
tcaggcccgaaagttcgtgcaaagtccccttctggtttttcttcaaatactgatgctgaa
aatcacaataccagtagaccacaaagcaagaccaaagaaaaggaatacatcataagtgtc
cactccaaaagtccctgtgatcttaggcccgagtcaacagcttcggtgcaatcagacaca
caaaaagcttcagatgagagaatagtagctatggattcagtcaaatcaggagttcacaag
tcccacacagggagcgagtatggcagggccaaagtttccagttctgggcaaaaagaaacc
tctgtcaaatcatcaagtccttgttccttacacggccccagaccggctagtaaagttgag
ccaggtagcgaaagcaccctgtcccactctctgtctgctgctgatctactaaaggaaacc
ttggctgctgcacgccagcagagctgccagtcaaaagccagtaaaaccagtaacaagccc
cacagcgagaaaagtggggggtctcaaagaaacagaaatcgtaaggatcgggaaaacgtg
gtcgaactgacacctgagtgtttgcccaatgcatctgccaatgagcttgttagtgactgg
ctgaggagcattcctgctaatagtagcatgctcacagttggtaatgagctaaatgaggga
gaaactgaacaggaggcaaaggagatggcagagacaccaacagaggagacagggacaaag
gagatgagtcctgaggccgagaaggtggaaataggggagaaaatcgaaccacaagaggaa
gaaaaaaaggaagaagctaaaggtgatggagccggcccaaggttaggtgatacaacagag
agttcttctcgttccaggaactggcattcttctgcagcagtgatgaaagtccttttaagc
tcttctctgggtcgatgttggagcatgcctgaggtgtctccagtttatggccgcagactg
agcacatcagccagggggcttttggactgtttggcccagctccagctcattgagcctgca
atcagcagtcatgaacagaaggaccgcaagcagcagtatgatgagataatggccattctt
cagtccctgtggctcactgaaccacgggacattgaggtcaaggagactaaagacagtggc
acagagcaggtgacaccaccaaggtcctcatctggggtgggtatgagcagcggctcaggt
ggatcagggaagagcaatgggaaccaagatgaaccaccagtaaaagaaacagaatcccta
catgaggaagagacagtgggaaaggttgttgatgaagagcatggaaatgcagcagccaga
gatacagaagttgagacagatgttgaggagacaaacaaaaccgaatcagcagaggaaccg
atgaagagtgaagagcaaagtactcttcctctcgacagctcaaaagccactgacaaccct
tcatcatcagaaaagagctctggcaacaacagctctaaatcgcccacagataacgaaaga
gatacacaagaggactctagctcaggcacccctcccactgctacgcgaccgctcttatcc
aaaagattatcccaagaccctgatccgctgtgggtactacaccttctgaagaagctagag
aaacagttcattagccactacattgaggccatggcagagtttaaagttcgctgggacctg
gacgacagcctcatcctggacaaaatgatttctgagctgagggaggaggtgagccgacgc
atccagaatagcatcgagcgggagatgaggaagattcaaagtcgagctgggaaagtgggg
cggtcacctcggccaccacagttagcaaacatgtctcgggattctaccatgactgagaag
aggcgtcgaatactgaaggtgatgaagaaccaatcaataaaaaccggcgactctctcacc
gacgaggaaatgacaggtgatttcagtgaccagcgaagcgacgatgagtactgcccctgc
gagacttgtgtccgcaagaaaatggcagctcaaccttttaagaagaatctgctggcagcc
gaagctcccataatgatggaatttgacctccttaagatacttcagctcaagaaatgccca
ttgcctcctcctactgtgccacaacctgctgaggaaaggacagctgcagatgaagaagag
agaaatttagaggtagtcaaagaagaagaggaagaagaaaccaaagaggatatcaaagct
gatgttgttttagaggagactattccagaggaagatgaggaggaagaccaggaaaaagag
agaggaaaaatagaacaggaaaaagagaagattagtattgaagaagaggatctggaagca
ggagaaacaagtggagatgtcactgagcaagatgagacatctgacaatggcgatgaggag
gataaagaacaatccacttgtcagtctgagagcaacaacgaagaagagggcaaggcagag
gaaacgagcagctgcacggatgatgaaggagagacagaagaagatgagaaggggcaacat
gaagagacaggaacaggagaagaggaggaggaggaggaggaagagagtgacacaacagtg
aaggaggcaacaacaggtgaggaggagaaagaatcggaggatgacacatctgtgacaaaa
gaagaagtgacactggtggaggagctgatggagggaaacattagcgcatcggcagaggag
gaagatgacggcacaggagaggaggagccacaggaagaggaaaaacagggagagagtgag
aagcaggaaggagaggcctctgaggagagagcttcaccacagagccaagatgcgattacc
gctgtatgtgtgacggagggagaagaagcggatgcagaagattcagacgacagcaaacgt
cacagcgacaccagtgctgaagaatctgcaccagaggaggctggtggcactggggaagag
gaggtgaaaggcagcagagaagatggagaggaagatgcagtggaggaatttaagcctgag
caagagagcaaagagcaggaggctgccgagagcaaaaacgaggatgggactcttctccac
cagttcaccaggacctcggtggagtcccagcctggctcgatggaagaggttgaaatggat
ttaccttcaaattcttag
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integrated database retrieval system
