Girardinichthys multiradiatus (darkedged splitfin): 124861378
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Entry
124861378 CDS
T08099
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04140
Autophagy - animal
gmu04148
Efferocytosis
gmu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124861378 (vps16)
04148 Efferocytosis
124861378 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124861378 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124861378 (vps16)
Membrane trafficking [BR:
gmu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
124861378 (vps16)
Hops complex
124861378 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
124861378
NCBI-ProteinID:
XP_047211023
LinkDB
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Position
24:complement(142675..166171)
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AA seq
835 aa
AA seq
DB search
MAFITANWNPLGDAFYRKTELYEMFWSLRDGFRDSLVAAAPYGGPIALLSSPLRCSPSTR
PQLEIYSASGVSITSFPWKSGPVVHLGWSVSDELLCVQEDGTVLIYDMYGSFKRHFSMGQ
EVVQSQVLEAKVFHSPYGTGIAIVTGSSRFTLATNIDDLKLRRLPEVPGLQGKPACWVVL
TQDRQTKVLVSCGPELYVLDNTSCTAVYPPGLSPQAGSIVHMAVSFSYKYLALFTDTGHL
WTGFSNLQERHGEVDTKQTATPKQMVWCRRPRSQQPSVVLMWDRLLLVVGACSDTIQFPM
EDQSVLVGELDGVRIIGPISQELLQEVPLVCQDIFKIASMAPGALLLEAHREYEKSSQKA
DEYLREIKEQNVLGDAVQQCVEAAAHEHDPETQKALMRAASFGKCFLTEFSPDQFVTTCR
ELRVLNAVRESSVGMPLTHTQFKQMTLQVLIDRLVYRQFYPLAIEICRYLKIPDYQGVSR
VLKHWASCKVQQKDLTDEAIARAVCAKVGDSPGVSYSDIAARAYECGRTELAIKLLDFEA
RSGEQVPLLLKMKRSQLALSKAVESGDTDLAVYTVVTYLKNEMNRGDFFMTLRNQPVALS
LYRQFCKLQEPQTLKDLYNQDDDHQELGNFYVSASYREKRLEGRLAQLQSAVDEYNKAKN
DFSAKATEDEMRLLRFQRKLDDEKGAGLLGLSLQATMEALMSLGLHKQSEQLYRDFRVPD
KRYWWLKLKSLAEKEQWEELEKFSKSKKSPIGYLAFVEVCMKNNNRYEAKKYVSKVTPEQ
KVKAHLAVGDLEGAADAAIERRNDLEMGAVLSRCSASDVLLMDKLNRARASAAKK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggccttcatcaccgctaactggaacccgctgggagacgccttctacagaaagaccgaa
ctctatgagatgttctggagtctccgcgatggattcagggacagcctggtggcagcagct
ccttatggaggtccaatcgctctcctcagttctcctctcagatgttctcccagcactcgt
cctcagttagagatttattctgcgtcaggagtctccatcaccagcttcccttggaagagc
gggccggtggtccacctgggctggtctgtcagtgacgagctgttgtgtgttcaggaagat
gggacggttctgatctatgacatgtatgggtccttcaagagacacttcagtatgggacag
gaagtggtccagagtcaggtgttggaggccaaggtgtttcactctccttatggaacaggt
attgccatagtaacaggttcctcccgctttaccttggcaaccaacatcgatgacctgaag
ctacgcaggttacctgaagtcccaggtctccaggggaagccggcctgctgggtggtcctc
actcaagacagacagaccaaagtcctggtgtcctgtggacctgaactttatgtcctggac
aacacatcctgcactgctgtgtatcccccaggcctcagtcctcaggctggcagcattgtc
cacatggctgtctccttcagctacaaatacctggctctgttcactgacacgggacacctg
tggactggcttctccaacctacaggagagacatggtgaagtggacaccaaacagacagct
acacctaaacagatggtctggtgccgcagaccgaggtcccagcagccctctgttgttttg
atgtgggacagactcctcctggttgtgggagcatgtagcgacaccatccagttccccatg
gaggaccagtcagtgttagtgggagaactagatggggttcggatcatcggtcccatcagt
caggagcttctgcaggaggttcctctggtgtgccaggacatctttaagatcgcctccatg
gctcctggagcactgctgctggaggcccaccgggagtatgagaagtccagtcagaaggcg
gatgagtacctgagggagatcaaggagcagaacgttctgggagatgctgtccagcagtgt
gtagaggcggcggctcatgagcatgaccctgagacccagaaggccctgatgagggcggcg
tccttcggcaagtgtttcctgacggagttcagtccagatcagtttgtgacgacctgcagg
gagctgcgggtgctaaacgccgtcagagagagcagcgtgggaatgccgctcacacacact
caatttaaacagatgactctacaggtcttgatagacaggttggtttaccggcagttttat
ccgttagccatcgagatctgtcgctacctgaagattccagattatcagggagtcagccga
gtcctgaagcactgggcctcctgcaaggtacagcagaaggacttgacagacgaggccatc
gctcgagccgtgtgtgccaaggtgggagactcacctggagtttcatactcagacatcgca
gctagagcatatgaatgtggacgcacagagctcgctatcaagcttctggactttgaggcc
cgttctggagagcaggttcctctgctgctgaagatgaagaggagtcagctggctctcagt
aaagctgtggagagtggtgacactgacctggcagtttacacggtggtgacgtacctgaag
aacgagatgaaccgaggagatttcttcatgactctgaggaaccagccagtggccctcagc
ctctacagacagttctgtaagctgcaggagcctcagacgctgaaagatctctacaaccag
gatgacgaccatcaggagctggggaacttctacgtctcagcgagttacagagagaagagg
ttggaggggcgtttggcccagctgcagagcgccgtggatgagtacaacaaggccaagaac
gacttttctgcaaaggctacagaggacgagatgcgtctacttcgtttccaaaggaagctg
gacgatgagaagggggcagggcttctgggactatccctgcaggctaccatggaggctctg
atgtctttgggacttcacaaacagtcagagcagctctacagggacttcagagtacctgac
aaaaggtactggtggttgaaactgaagtctctggctgagaaggagcaatgggaggagctg
gaaaagttctccaagagcaagaagtctcctattggttacctggcctttgtggaggtgtgc
atgaagaacaacaacaggtatgaagccaagaagtacgtcagtaaagtcacacctgagcag
aaggtcaaagctcacctggccgtgggggacctggagggggcagcggatgctgccattgag
cgcaggaacgacctagaaatgggggcggtcctctccagatgctccgcctccgacgtcctg
ctgatggacaagttgaatcgagcccgggccagcgccgccaagaagtga
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