Girardinichthys multiradiatus (darkedged splitfin): 124861406
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Entry
124861406 CDS
T08099
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 4-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gmu04054
]
124861406
Pattern recognition receptors [BR:
gmu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
124861406
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
PRY
NOD2_WH
LRR_6
SPRY
LRR_4
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
124861406
NCBI-ProteinID:
XP_047211094
LinkDB
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Position
24:3428163..3756754
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AA seq
1165 aa
AA seq
DB search
MDQCEDREDRVPPSKTTLCGEHEDQSKVQRKQSEPQPGPEPSCVSLKSNMSKDELILFKS
DQRSTANRIQQTLKPEPEPEPSCVSLKSDDSFGRVIDFKSQQLSAAKRVDQQNSEVPSGP
SAQQHQTQLDSIFMLLEDNIVTFVKNELKKIQKVLSPDYPEGLESQWGDEEVLEGEDEEK
RRSSREAFVKITLNFLKKMKQEELAERLQSRFFPSVFQHKLKSDLKKRFQCVFEGIAKAG
SPTLLNQIYTELYITEGGTGEVNDEHEVRQIETASRKPHRPETTIRQEDIFKVPPGRDQP
IRTVMTKGVAGIGKTVLTQKFTLDWAEDKAHQNIQLIFPFTFRELNVLKEKRFSFVDLVH
HFFTETKEICSFESFQVLFIFDGLDESRLPLDFHNKEILTDVTESTSVDVLLTNLIRGTL
LPSALLWITTRPAAANQIPPECVGMVTEVRGFTDPQKEKYFRKRFRDKKQASRIISHMKT
SRSLHIMCHIPVFCWITATVLEDVLETREEGELPNTLTEMFIHFLVVQTKVKKVKYGGSE
TDPHWSPESRKMIESLGKLSFDQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQIFREE
RGLYQDKVFCFVHLSVQEFLAALHVHLTFIMDGVNLMDEEQTISMWSKLFNKPNLTSLHQ
RAVDEALQSPNGHLDLFLRFLLGLSVETNQTLLQGLLTKTRSSLQTIEGTVQYIKEKINE
NLSAEKSINLFHCLNELNDRSLVQEIQQSLSSGSLSTDKLSPAQWSALVFILLSSGEDLD
VFDLKKYSASEEALLRLLPVIKASNKILLKNCNLSKRSSEVLASVLSSQSSNLREMDLSN
NKLQDSGVELLSSGLKSPHCKLETLRLKNCNLSERSCEVLASVLSSQSSNLREMDLSNNK
LQDSGVELLSSGLKSPNCKLETLRLRSCNLSGRTCEVLSSVLSSQSCCLREVDLQNNNLQ
DSGEKLPSGSDCTLEIFREPDGVRWLKPALRKYSCQLTIDTNTVNRNLQLSEDNRKVTRV
EELQSYPDHPDRFDYWFPQLLCSDGLTGRCYWEVEWRGIVYISVSYRRIRRKGYSNDCLF
GWNDQSWSLRCSDGGYSVWHNDKVTLISSSISNRVAVYVDCPAGILSFYRVSSDSLIHLH
TFNTTFTEPLYPGFRIRPDSSVFLC
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggacagagtccctccctctaaaaccactctgtgtgga
gaacatgaggaccagagcaaagttcagaggaaacaatcagaaccacaacctggacctgaa
cccagctgtgtgtccttaaagagcaacatgtcaaaggatgaacttattttatttaaatca
gatcaacgttcaactgcaaacaggatccaacagaccctcaaaccagaaccagaaccagaa
cccagctgtgtgtccttaaagagtgatgattcatttggtcgtgttattgattttaaatca
cagcaactttcagctgcaaagagagtggaccagcagaactcagaggttcccagtggtccg
tctgcccagcagcatcaaacacagctggattccatatttatgctgctggaggacaacatt
gttacttttgtgaagaacgagctgaagaagatccagaaggttctgagtccagattaccca
gaaggcttagagagtcagtggggggatgaggaggtgttggaaggtgaggatgaagaaaaa
aggaggagcagcagagaggcttttgttaagatcacactgaacttcctgaagaagatgaag
caggaggagctggctgaacgtctgcagagcaggttttttccctcagtttttcaacataaa
cttaaatctgatctgaagaagaggttccagtgtgtgtttgaggggatcgctaaagcagga
agtccaacccttctgaaccagatctacacagagctctacatcacagagggagggactgga
gaggtcaatgatgaacatgaggtcagacagattgaaacagcatccaggaaaccacacaga
ccagaaacaaccatcagacaagaagacatctttaaagtcccacctggaagagatcaacca
atcagaacagtgatgacaaagggagtggctggcattgggaaaacagtcttaacccagaag
ttcactctggactgggctgaagacaaagcccaccagaacatccagttaatatttccattc
accttcagagagctgaatgtgctgaaagagaaaaggttcagctttgtggaccttgttcat
cacttctttactgaaaccaaagaaatctgcagctttgaatccttccaggttctgttcatc
tttgatggtctggatgagagtcgacttcctctggacttccacaacaaggagatcctgact
gatgttacagagtccacctcagtggatgttctgctgacaaacctcatcagggggacactg
cttccctctgctctcctctggataaccacacgacctgcagcagccaatcagatccctcct
gagtgtgttggcatggtgacagaggtcagagggttcactgacccacagaaggagaagtac
ttcaggaagagattcagagataagaagcaggccagcaggataatctcccacatgaagaca
tcaagaagcctccacatcatgtgccacatcccagtcttctgctggatcactgctacggtt
ctggaggatgtgttggagaccagagaggaaggagagttgcccaacaccctgactgagatg
ttcatccacttcctggtggttcagaccaaagtgaagaaggtcaagtatggaggatctgag
acagatccacactggagtccagagagcaggaagatgattgagtctctgggaaaactgtct
tttgatcagctgcagaaaggaaacctgatattctatgaatcagacctgacagagtgtggt
atcgatatcagagcagcctcagtttactcaggagtgttcacacagatctttagagaggag
agagggctgtaccaggacaaggtgttctgcttcgtccatctgagtgttcaggagtttctg
gctgctcttcatgtccatctgaccttcatcatggatggagttaatctgatggatgaagaa
caaaccatttctatgtggtctaagttatttaacaaaccaaatctaacaagtctccatcag
agagctgtggacgaggccttacagagtccaaatggacacctggacttgttcctccgcttc
ctcctgggtctttcagtggagaccaatcagactctcctgcaaggtctgctgacaaagaca
agaagtagcttacagaccattgagggaacagttcagtacatcaaggagaagatcaatgag
aatctgtctgcagagaaaagcatcaacctgttccactgtctgaatgaactgaatgatcgt
tctctggtccaggagatccaacagtctctgagttcaggaagtctctccacagataaactg
tctcctgctcagtggtcagctctggtcttcatcttactgtcatcaggagaagatctggat
gtgtttgacctgaagaaatactctgcttcagaggaggctcttctcaggctgctgccagtg
atcaaagcttcaaacaaaattctattgaagaactgtaacctctcaaagagaagctctgaa
gttctggcctcagttctcagctcccagtcctccaatttaagagagatggacctgagtaac
aacaagctgcaggattctggagtggaactgctgtcttctggactgaagagtccacactgc
aaactggaaactctcagattgaagaactgtaacctctcagagagaagctgtgaagttctg
gcctcagttctcagctcccagtcctctaatctgagagagatggacctgagtaacaacaag
ctgcaggattctggagtggagctgctgtcttctggacttaagagtccaaactgcaaactt
gaaactctcagacttagatcctgtaacctctcagggagaacttgtgaagttctgtcatca
gttcttagctcccagtcctgctgtctgagagaagttgacctgcagaacaacaacctacaa
gattcaggggagaagttgccgtctggttcagactgtacactggaaatattcagggagcct
gatggagtccgatggttgaaaccagctctgaggaagtattcctgtcagctcacaatcgac
acaaacacagtgaacagaaacctccaactgtctgaagacaacaggaaggtgacacgtgtg
gaggagcttcagtcatatcctgatcatccagacagatttgattactggtttcctcagctg
ctgtgtagtgatggtctgactggtcgctgttactgggaggtcgagtggagaggaatagtt
tatatttcagtgagttacagaagaatcaggaggaaaggatacagtaatgactgtttgttt
ggatggaatgatcagtcctggagtctgagatgctctgatggtggttactctgtctggcac
aatgacaaagttacattgatctcctcctccatctctaacagagtagcagtgtatgtggac
tgtcctgctggcattctgtccttctacagagtctcctctgactcactgatccacctccac
accttcaacaccacattcactgaacctctttatcctggattcaggatcaggcctgattcc
tcagtgtttctgtgttga
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