Girardinichthys multiradiatus (darkedged splitfin): 124861407
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Entry
124861407 CDS
T08099
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gmu04054
]
124861407
Pattern recognition receptors [BR:
gmu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
124861407
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
NOD2_WH
PRY
SPRY
LRR_6
LRR_4
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
124861407
NCBI-ProteinID:
XP_047211100
LinkDB
All DBs
Position
24:complement(1978283..2005581)
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AA seq
1162 aa
AA seq
DB search
MDQCEDREDRVPPSKTTLCGEHEDQSKVQRKRSEPEPGPGPSCVSLKSNWSKEDFIDFKS
DQRSAANRIQQNLKPEPEPSCVSFKSDRSKFLGIDFKSDQPSAAKRVDQQNSEVPSGPSA
QQHQTRLDSIFMLLEDNIVTFVKNELKKIQKVLSPDYPEGLESQWGDEEVLEGEDKEKRR
SNREAFVKITLNFLKKMKQEELAERLQSRLFSSVCKHKLKSGVKKRFQCVFEGIAKAGSP
TLLNQIYTELYITEGGTGEVNDEHEVRQIETASRKPHRPETTIRQEDIFKVPPGRDQPIR
TVMTKGVAGIGKTVLTQKFTLDWAEDKAHQNIQFIFPFTFRELNVLKEKKFSLVDLVHHF
FTETKEICSFEHFQVLFIFDGLDESRLPLDFHNKEILTDVTESTSVDVLLTNLIRGKLLP
SALLWITTRPAAANQIPPECVGMVTEIRGFTDPQKEEYCWKRFRDEEQASRIISHMKTSR
SLHIMCHIPVFCWITATVLEDVMETREGGELPNTLTEMFIHFLVVHTKVKKVKYDGGSET
DPHWSPESRKMIESLGKLAFDQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQIFREER
GLDQDKVFCFVHLSVQEFLAALHVHLTFIKDGVNLMEDQKNIFGWSKFSKKPKLKYLHQR
AVDEALQSPNGHLDLFLRFLLGLSEETNQTLLQGLLTKTGSSSETNEGTVQYIKEKINEN
LSAEKSINLFHCLNELNDRSLLQKIQQSLSSGSLSTDKLSPAQWSALVFILLSSGEDLDV
FDLEKYSASEEALLRLLPVVKPSNKVLLKNCNLSERSCEVLASVLSSQSSNLREMDLSNN
KLQDSGVELLSSGLKSPNCKLETLRLKNCNLSERSCEVLASVLSSQSSNLREMDLSNNKL
HDSGVELLSSGLKSPNCKLETLRLRSCNLSGRTCEVLSSVLSSQSCCLREVDLQNNNLQD
SGEKLPSGSDCTLEIFRKPDGVRWLKDLRKYSCQLTIDTNTMNRYLKLSEDNRKVTWMKE
LQSYPDHPDRFNYCSQLLCSDGLTGRCYWEVEWRGRVFISVSYRRIRRKGDTDDCLFGWN
DRSWSLNCSDGDYSVLHKRKKTPISSSISNRVAVYVDCPAGILSFYRISSDSLIHLHTFN
TTFNEPLYPGFLIGSGSSVFLC
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggacagagtccctccctctaaaaccactctgtgtgga
gaacatgaggaccagagcaaagttcagaggaaacgatcagaaccagaacctggacctgga
cccagctgtgtgtccttaaagagcaactggtcaaaggaagattttattgattttaaatca
gatcaacgttcagctgcaaacaggatccaacagaacctcaaaccagaaccagaacccagc
tgtgtgtccttcaagagcgacaggtcaaagtttcttggtattgattttaaatcagatcaa
ccttcagcagcaaagagagtggaccagcagaactcagaggttcccagtggtccgtctgcc
cagcagcatcaaacacggctggactccatatttatgctgctggaggacaacattgttact
tttgtgaagaacgagctgaagaagatccagaaggttctgagtccagattacccagaaggg
ttagagagtcagtggggggatgaggaggtgttggaaggtgaggataaagagaagaggagg
agcaacagagaggcttttgtgaagatcacactgaacttcctgaagaagatgaagcaggag
gagctggctgaacgtctgcagagcagacttttttcctcagtttgcaaacataaacttaaa
tctggtgtgaagaagaggttccagtgtgtgtttgaggggatcgctaaagcaggaagtcca
acccttctgaaccagatctacacagagctctacatcacagagggagggactggagaggtc
aatgatgaacatgaggtcagacagattgaaacagcatccaggaaaccacacagaccagaa
acaaccatcagacaagaagacatctttaaagtcccacctggaagagatcaaccaatcaga
acagtgatgacaaagggagtggctggcattgggaaaacagtcttaacccagaagttcact
ctggactgggctgaagacaaagcccaccagaacatccagttcatatttccattcaccttc
agagagctgaatgtgctgaaagagaaaaagttcagcttggtggaccttgttcatcacttc
tttactgaaaccaaagaaatctgcagctttgaacacttccaggttctgttcatctttgat
ggtctggatgagagtcgacttcctctggacttccacaacaaggagatcctgactgatgtt
acagagtccacctcagtggatgttctgctgacaaacctcatcagggggaaactgcttccc
tctgctctcctctggataactacacgacctgcagcagccaatcagatccctcctgagtgt
gttggcatggtgacagagatcagggggttcactgacccacagaaggaggagtactgctgg
aagagattcagagatgaggagcaggccagcaggatcatctcccacatgaagacatcaaga
agcctccacatcatgtgtcacatcccagtcttctgctggatcactgctacggttctggag
gatgtgatggagaccagagagggaggagagttgcccaacaccctgactgagatgttcatc
cacttcctggtggttcacaccaaagtgaagaaggtcaagtatgatggaggatctgagaca
gatccacactggagtccagagagcaggaagatgattgagtctctgggaaaactggctttt
gatcagctgcagaaaggaaacctgatcttctatgaatcagacctgacagagtgtggcatc
gatatcagagcagcctcagtgtactcaggagtgttcacacagatctttagagaggagaga
gggctggaccaggacaaggtgttctgcttcgtccatctgagtgttcaagagtttctggct
gctcttcatgtccatctgaccttcatcaaggatggagttaatttgatggaagaccaaaaa
aacatttttggttggtctaaattctccaagaaaccaaaactaaaatatctccatcagaga
gctgtggacgaggccttacagagtccaaatggacacctggacttgttcctccgcttcctc
ctgggtctttcagaggagaccaatcagactctcctgcaaggtctgctgacaaagacagga
agtagctcagagaccaatgagggaacagttcagtacatcaaggagaagatcaatgagaac
ctgtctgcagagaaaagcatcaacctgttccactgtctgaatgaactgaatgatcgttct
ctgctccagaagatccaacagtctctgagttcaggaagtctctccacagataaactgtct
cctgctcagtggtcagctctggtcttcatcttactgtcatcaggagaagatctggatgtg
tttgacctggagaaatactctgcttcagaggaggctcttctcaggctgctgccagtggtc
aaaccttcaaacaaagttctattgaagaactgtaacctctcagagagaagctgtgaagtt
ctggcctcagttctcagctcccagtcctctaatctgagagagatggacctgagtaacaac
aagctgcaggattctggagtggagctgctgtcttctggactgaagagtccaaattgcaaa
ctggaaactctcagattgaagaactgtaacctctcagagagaagctgtgaagttctggcc
tcagttctcagctcccagtcctctaatctgagagagatggacctgagtaacaacaagctg
catgattctggagtggagctgctgtcttctggactgaagagtccaaactgcaaactggaa
actctcagacttagatcctgtaacctctcagggagaacttgtgaagttctgtcatcagtt
cttagctcccagtcctgctgtctgagagaagttgacctgcagaacaacaacctacaagat
tcaggggagaagttgccgtctggttcagactgtacactggaaattttcaggaagcctgat
ggagtccgatggttgaaagatctgaggaagtattcctgtcagctcacaatcgacacaaac
acaatgaatagatacctaaaactgtctgaagacaacaggaaggtgacatggatgaaggag
cttcagtcatatcctgatcatccagacagatttaattactgttctcagctgctgtgtagt
gatggtctgactggtcgctgttactgggaggtcgaatggagaggaagagtttttatatca
gtgagttacagaagaatcaggaggaaaggagacactgatgactgtttgtttggatggaat
gatcggtcctggagtctgaactgttctgatggtgattactctgtcttgcacaaaaggaag
aaaacacccatctcctcctccatctctaacagagtagcagtgtatgtggactgtcctgct
ggcattctgtccttctacagaatctcctctgactcactgatccacctccacaccttcaac
accacgttcaatgaacctctttatcctggattcttgatcggttctggttcctcagtgttt
ctgtgttga
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