Girardinichthys multiradiatus (darkedged splitfin): 124861510
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Entry
124861510 CDS
T08099
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gmu04054
]
124861510
Pattern recognition receptors [BR:
gmu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
124861510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
PRY
NOD2_WH
LRR_6
SPRY
LRR_4
AFG1_ATPase
Pcc1
DUF6063
Motif
Other DBs
NCBI-GeneID:
124861510
NCBI-ProteinID:
XP_047211271
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All DBs
Position
24:1747719..1771383
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AA seq
1228 aa
AA seq
DB search
MDQCEDREDRVPPSKTTLCGEHEDQSKVQRKRSEPEPGPEPSCVSLKSNRSKDDGINFKS
AQRSAANRIQQTLKPEPEPEPSCVSFKSDDSKSLGIDFKSDQPPAAKRVDQQNSEVPSGP
SAQQHQTQLDSIFMLLEDNIVTFVKNELKKIQKVLSPDYPECLESQWEDEEVLEGQDEEQ
RRSNREAFVKITLNFLKKMKQEELAERLQSRRFSSVCQRKLKSGLNKRFQCVFEGIAKAG
SPTLLNQIYTELYITEGGTGEVNDEHEVRHIETASRKPHRPETTIRQEDIIKVPPGRDQP
IRTVMTKGVGGIGKTVLTQKFTLDWAEDKAHQNIQFIFPFTFRELNVLKEKKFSLVDLVH
HFFTETKEICSFEHFQVLFIFDGLDESRLPLDFHNKEILTDVTESTSVDVLLTNLIRGKL
LPSALLWITTRPAAANQIPPECVGMVTEVRGFTDPQKEEYFRKRFRDEEQASRIISHMKT
SRSLHIMCHIPVFCWITATVLEDVLESREGGELPSTLTEMFIHFLVVQTKVKKVKYDGGS
ETDPHWSPESRKMIESLGKLAFDQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQIFRE
ERGMYQNKVFCFVHLSVQEFLAALHVHLTFMNDGVNLMVEKKNISALSKLSKKPNLKILH
QRAVNKALQSPNGHMDLFLRFLLGLSVETNQTLLQGLLTKTGSSSQTNEGTVQYIKKKFK
QNLSAEKSINLFHCLNELNDRSLVQEIQQSLSSGSLSTDKLSPAQWSALVFILLSSGEDL
DVFDLEKYSASEEALLRLLPVVKASNKVLLKNCNLSERSCEVLASVLSSQSSNLREMDLS
NNKLQDSGVEMLSSGLKSPNCKLETLRLKNCNLSKRSCEVLASVLSSQSSNLREMDLSNN
KLQDSGVELLSSGLKSPNCKLETLRLKNCNLSERSYEVLASVLSSQSSNLREMDLSNNKL
QDSGVELLSSGLKSPNCKLETLRLRSCNLSGRTCEVLSSVLSSQSCCLREVDLQNNNLQD
SEEKLPSGSDCTLEIIREPAGVRWLKPGLRKYSCQLTIDTNTVNRNLQLSEDNRKVTHVE
ELQSYPDHPDRFDYWPQLLCRDGLTGRCYWEVEWRGDVFISVSYRRIRRKGDRNYSWFGW
NNQSWSQSCSDDGYTVWHNNRETFIPSSSSSSSISNRVAVYVDCPAGILSFYRVSSDSVI
HLHTINTTFTEPLYPGFWIGPGSSVFLC
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggacagagtccctccctctaaaaccactctgtgtgga
gaacatgaggaccagagcaaagttcagaggaaacgatcagaaccagaacctggacctgaa
cccagctgtgtgtccttaaagagcaacaggtcaaaggatgatggtattaattttaaatca
gctcaacgttcagctgcaaacaggatccaacagaccctcaaaccagaaccagaaccagaa
cccagctgtgtgtccttcaagagcgatgattcaaagagtcttggtattgattttaaatca
gatcaacctccagctgcaaagagagtggaccagcagaactcagaggttcccagtggtcca
tctgcccagcagcatcaaacacagctggactccatatttatgctgcttgaggacaacatt
gttacttttgtgaagaacgagctgaagaagatccagaaggttctgagtccagattaccca
gaatgcttagagagtcagtgggaggatgaggaggtgttggaaggtcaggatgaggagcag
aggaggagcaacagagaggcttttgtgaagatcacactgaacttcctgaagaagatgaag
caggaggagctggctgaacgtctgcagagcagacgtttttcctcagtttgtcaacgtaaa
cttaaatctggtctgaacaagaggttccagtgtgtgtttgaggggatcgctaaagcagga
agtccaacccttctgaaccagatctacacagagctttacatcacagagggagggactgga
gaggtcaatgatgaacatgaggtcagacacattgaaacagcatccaggaaaccacacaga
ccagaaacaaccatcagacaagaagacatcattaaagtcccacctggaagagatcaacca
atcagaacagtgatgacaaagggagtgggtggcattgggaaaacagtcttaacccagaag
ttcactctggactgggctgaagacaaagcccaccagaacatccagttcatatttccattc
accttcagagagctgaatgtgctgaaagagaaaaagttcagcttggtggaccttgttcat
cacttctttactgaaaccaaagaaatctgcagctttgaacacttccaggttctgttcatc
tttgatggtctggatgagagtcgacttcctctggatttccacaacaaggagatcctgact
gacgttacagagtccacctcagtggatgttctgctgacaaacctcatcagggggaaactg
cttccctctgctctcctctggataaccacacgacctgcagcagccaatcagatccctcct
gagtgtgttggcatggtgacagaggtcagagggttcactgacccacagaaggaggagtac
ttcaggaagagattcagagatgaggagcaggccagcaggatcatctcccacatgaagaca
tcaagaagcctccacatcatgtgccacatcccagtcttctgctggatcactgctacggtt
ctggaggatgtgttggagtccagagagggaggagagctgcccagcaccctgactgagatg
ttcatccacttcctggtggttcagaccaaagtgaagaaggtcaagtatgatggaggatct
gagacagatccacactggagtccagagagcaggaagatgattgagtctctgggaaaactg
gcttttgatcagctgcagaaaggaaacctgatcttctatgaatcagacctgacagagtgt
ggcatcgatatcagagcagcctcagtgtactcaggagtgttcacacagatctttagagag
gagagagggatgtaccagaacaaggtgttctgcttcgtccatctgagtgttcaggagttt
ctggctgctcttcatgtccatctgaccttcatgaatgatggagttaatctgatggtagaa
aaaaagaacatttctgctttgtctaaattatctaagaaaccaaatctaaaaattctccat
cagagagctgtgaacaaggccttacagagtccaaatggacacatggacttgttcctccgc
ttcctcctgggtctttcagtggagaccaatcagactctcctacaaggtttgctgacaaag
acaggaagtagctcacagaccaatgagggaacagttcagtacatcaagaagaagttcaaa
cagaatctgtctgcagagaaaagcatcaacctgttccactgtctgaatgaactgaatgat
cgttctctggtccaggagatccaacagtctctgagttcaggaagtctctccacagataaa
ctgtctcctgctcagtggtcagctctggtcttcatcttactgtcatcaggagaagatctg
gatgtgtttgacctggagaaatactctgcttcagaggaggctcttctcaggctgctgcca
gtggtcaaagcttcaaacaaagttctattgaagaactgtaacctctcagagagaagctgt
gaagttctggcctcagttctcagctcccaatcctctaatctgagagagatggacctgagt
aacaacaagctgcaggattctggagtggagatgctatcttctggactgaagagtccaaac
tgcaaactggaaactctcagattgaagaactgtaacctctcaaagagaagctgtgaagtt
ctggcctcagttctcagctcccagtcctctaatctgagagagatggacctgagtaacaac
aagctgcaggattctggagtggagctgctgtcttctggactgaagagtccaaactgtaaa
ctggaaactctcagattgaagaactgtaatctctcagagagaagctatgaagttctggcc
tcagttctcagctcccagtcctctaatctgagagagatggacctgagtaacaacaagctg
caggattctggagtggagctgctgtcttctggactgaagagtccaaactgtaaactggaa
actctcagacttagatcctgtaacctctcagggagaacttgtgaagttctgtcatcagtt
cttagctcccagtcctgctgtctgagagaagttgacctgcagaacaacaacctacaagat
tcagaggagaagttgccatctggttcagactgtacactggaaataattagggagcctgct
ggagtccgatggttgaaaccaggtctgaggaagtattcctgtcagctcacaatcgacaca
aacacagtgaacagaaacctccaactgtctgaagacaacaggaaggtgacacatgtggag
gagcttcagtcatatcctgatcatccagacagatttgattactggcctcagctgctgtgt
agggatggtctgactggtcgctgttactgggaggttgagtggagaggagatgtttttata
tcagtgagttacagaagaatcaggaggaaaggagacagaaattactcttggtttggatgg
aataatcagtcctggagtcagagctgctctgatgatggttacactgtctggcacaataac
agagaaacatttatcccctcctcctcctcctcctcctccatctctaacagagtagcagtg
tatgtggactgtcctgctggcattctgtccttctacagagtctcctctgactcagtgatc
cacctccacaccatcaacaccacattcactgaacctctttatcctggattctggatcggt
cctggttcctcagtgtttctgtgttga
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