Girardinichthys multiradiatus (darkedged splitfin): 124861591
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Entry
124861591 CDS
T08099
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124861591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124861591
Enzymes [BR:
gmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124861591
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124861591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
zf-RING_2
Ig_DSCAM-DSCAML_C
zf-C3HC4_3
Pur_ac_phosph_N
PRY
zf-C3HC4_2
zf-RING_5
NDNF
AAR2
Motif
Other DBs
NCBI-GeneID:
124861591
NCBI-ProteinID:
XP_047211401
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Position
24:12989371..13077040
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AA seq
689 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFGCAHRILVSHCTTNESVQSIGAFQCPTCR
YVISLSPERGLEGLKRNVTLQNIIDRVQQASSSAGLPLPLPLAGPHSGLNSPSEEGSNRL
ALVPVSAAMSSPETPPEPVQCQFCEQDPPQDAVKTCVTCEVSYCEECLRATHPNKKPFTG
HRLIEPMPDSHLRGLQCLEHEEEKVNMYCVTDDQLICSLCKLVGRHRDHHVAALSDRYEK
LKQALDSNLSNLIKRNNELESLMGKLIQTCQHVEVNASRQEGKLLEECDVLIDIIQQRRQ
IIGSKIKEGKAQRIRKLAQQISNCKQCIERSSALITQADQTLKETDHARFLQTAKSINER
VSMATASTQVLIPEIHLTDTFDTFALDFTREKKLLESLDYLTAPNAPCIREELCTASYDT
ISVHWTSDDEFTVVSYELQYAIFTGQSNIVSLCNSLESWMIVPNIKQNHYTVHGLQSGTK
YIFVVKAINQAGSRSSEPGTLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETTSKKGHG
QDRFSSQSSYGVVGNVYIDSGRHYWEALIGGSTWYAIGIAYKSAPKHEWIGKNSASWVLC
RCNNSWVVRHNSKELAIEPSPHLRRVGVLLDYDAGYVAFYDAVGSQHLHTFHVSFVQPVC
PVFNVWNKCLTILTGLPIPDHLEGLESNN
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggacactctggagtcagagctgacctgcccaatctgcctggagctctttgaagaccca
ctgctgctcccctgtgcccacagcctgtgctttggctgtgcccaccgtattctcgtctcc
cattgcaccactaacgagtctgtccagagcattggtgcttttcagtgccccacttgtagg
tatgtaatttccctgagtccagagcgtggattagaaggactcaagagaaacgtaaccttg
cagaacataatcgacagagttcagcaggcctcatcatcagcagggctacctctaccgctg
ccgttggccggcccccacagtgggctcaactctcccagtgaggaagggagcaaccggctg
gctctggttcccgtcagtgccgccatgtccagcccggaaactcccccggaaccagtccaa
tgccagttttgtgagcaggacccaccccaggatgctgttaagacatgtgtgacatgtgaa
gtgtcttactgcgaggagtgcctcagggcaactcatccaaacaagaagccattcaccggt
caccggctcattgagccaatgcctgattcccacctcagagggctccagtgcctggagcat
gaggaggagaaagtgaacatgtactgtgtcactgatgatcagctcatctgctcattgtgt
aaactggttggaaggcacagggatcaccacgtggcagccctgagcgaccgctatgaaaaa
ctaaagcaagcactcgactccaacttgagcaacttaatcaagaggaacaatgagctagag
tcgcttatggggaagctgatccagacttgtcaacatgttgaggtgaatgcgtcccgccag
gaggggaagctcttggaggagtgcgacgtcctgattgacatcattcagcagaggcggcag
atcattggcagcaagattaaagaggggaaggctcaaaggattcggaagctggcccagcag
atttccaactgcaagcagtgcatcgagaggtcctcggccctcataacacaggccgatcag
acactgaaggaaaccgaccacgctcgcttcctgcagacggccaagagtatcaatgagagg
gtttccatggcaacagcatcaacccaggtcctgattcctgagatccacctgacagacacc
tttgacacgtttgctctggacttcactagagagaagaagttactggaaagtctggattac
ctcacagctccaaacgctccgtgcataagggaagagttgtgcacggcttcctatgacacc
atcagtgtccactggacgtctgatgatgaattcacggttgtgtcttatgagctccagtat
gccatcttcactggacagtccaacattgtcagtctatgcaactcattagaaagttggatg
attgttcccaacatcaagcaaaaccactacacagtgcatggtttgcagagcggcaccaag
tacatctttgttgtgaaagccattaatcaagcgggaagcagaagcagtgaaccagggact
ctgaaaaccaacagccagccattcaaactggatccgaaatctgctcacaagaagctcaag
gtttcccacgataacctcacagtggagcgagatgaaaccacgtccaagaaaggccacggc
caggatcggttctcaagccagagcagctacggtgtggtgggaaatgtctacatcgacagt
gggcgtcactactgggaggctcttattggagggagtacatggtacgctataggcattgcc
tacaagtcagcccccaagcatgagtggattggcaagaactcagcctcttgggtactttgc
cgttgcaacaactcttgggtggttcgtcacaacagcaaggagctggccatcgaaccctca
ccccacctgcgacgggtaggggtcctgctggattatgatgccggatacgtggcattctat
gacgccgttggctcccagcacctgcacacctttcacgtctcttttgttcagcctgtgtgt
cctgtgtttaatgtatggaataagtgtctgacaatactcactggtctccccatccctgac
catttagagggactagaatcaaacaactga
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