Girardinichthys multiradiatus (darkedged splitfin): 124862270
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Entry
124862270 CDS
T08099
Name
(RefSeq) MHC class II transactivator-like isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gmu01001
]
124862270
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gmu04054
]
124862270
Enzymes [BR:
gmu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
124862270
Protein kinases [BR:
gmu01001
]
Serine/threonine kinases: Other
TAF1 family
124862270
Pattern recognition receptors [BR:
gmu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
124862270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
LRR_14
nSTAND3
AAA_16
AAA_22
nSTAND_NTPase5
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
124862270
NCBI-ProteinID:
XP_047212044
LinkDB
All DBs
Position
X:8690366..8721338
Genome browser
AA seq
1662 aa
AA seq
DB search
MTPFAEVLDQVRLVLTWAFPGEVQALLKGLVKEGIISEIYRKSLNLHWLNDGIVTTLTSK
PGCSKLDVDFNSHGSVAQWYLDQDPMTQMSTSVSKLLASDHNVEQTELASSIEEPNSTRI
NLQNLSHEYELLQRNQEEIKELLEEFVMDVSYSNEELFSSPSGFDCTLRSSDEKGELLSS
ASSESASENERVSTGNLENEEEWLEQVEEAARRIAIPLWQHWDRGRGMLQTLLLCLPSTL
VNDGMVSEVEAQCTTFDTEEKIELAAACRTPDAFVYDFECAEPSLTCDTAAGRSERGELN
FSTNNRIAVLNMEDFRIHRAARSASPVEACKATDASYITEMLESQFDIFWPPDKMANVED
DLFCLTANTLCKQCGTNSGLSESTFRHLLYSGAPEDRRTVLQENSHYSLTERKTDYLQDV
FRDTAASCIDRFRELHEKTDSHGDAKMQEFDQDSLSLSDLLPDDDISNFLDDDYLVSHLD
PTLLLNFEEQGTVGLDFVDEIINSDPPVALEANHKEQKEQSQPTDKIKPKRKRQRDALSK
QCTDGNLRVKRQKAIDSPKTKEETVEPTVTHGADAETMPVPTEPMRRPSTTPPGIVHVFP
SQSANPIPIQLITIPDSPAYKVVQLSSSPSPLIRLPLPNTSVMPTYIFVPAPSPTCKRQV
PPLSPVDGAVAPVLMSSFQPGSMSDTASKAMSPPAAPPSSPTNEISPCKEALKSPPEVEI
PQGVKDYIQQSKTHMSQACQHMEGGLRLSAHYVDVNVSQREMARSGKNTNRCLDKELIIT
GDIDRQKSSVGRSQIFDSLDGKRCSLLLGNAGMGKTTLIKKLCLDWSKDCIPQFDFVFLL
DGKQLTLTEPVHSLQTLLLSRSSFAPPCMDPEGVYAQILAAPKRVLVVFDGFDELRDYEM
LLQTQEKDLVASLQKDSKAQAFTVKQLFSGILQRVLLPGCMLLLAIRPRGTASQLLRRTD
SFLEVCGFTPANVETYVSQYFSDPELRASALDYLKICNYLHLLCWNPGLCHLVCNVLQQC
KSSDALPRTLTTLCHKVLCLKMEKDRGSPESLVEPKSQKTVEPIEETEISNNSQGRRGHK
NNRTRARAVARISSRSQRARRMKGQEKLEEENACEDTNRTESRELLSQLCSLAWEGVKSN
SSVVPRERTISTKLRAFSLKAGLLLSQSLMKRTPAKLEDSEGGGREVNNGTVGVEEKESK
QKGGNAETFDECEDNILLWANPFLQSYMAAVHLSLSRTVTDRSFLQTLPFQTGAKGRRKS
QREELELTQRFALGLLFHNKTELQMLHSYSDTVFRDMVASKQALVMKHLEGLSFGDLSSA
QILEMCNYVYEASFTHKENGRNTGGKMLALLAVHIPEFLSFRGVPLSPPDVFTVQNALSR
GGAEGRSFCLDLEDSGIHICGLRALVGLSNINTYRACIADVLTLWKELEKLGDEGLLQGA
VSKFKIHPLKATQVCHIEHLESLVSIHTHKRLSSSSSQSGSILADGVPAVKELYKLEFEL
GPENGPLALPKLWDLLPGLHNLQHLDVENSKIGDKGAEKLANALVFLRSLEILNLSENCV
GDQGVKKLALALKDLPKLHCLSLYSNVISDEGAESLAAVLPHMASLTDLDVKYNKMTDVG
AQSLGASLRNCKKVKTLRMWNQCIPYGVFERLQQQDSRILWH
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgtttgccgaggttctggaccaggtgaggttggttctcacctgggcattccca
ggtgaggtccaggctctgttgaagggtctggtgaaggaagggatcatctcagagatttac
aggaagagtttgaatttgcactggctgaatgatgggatcgtaactacgttaaccagtaaa
ccaggatgtagcaagctggatgtggactttaattctcacggatcagtggcccagtggtac
ctcgaccaagacccgatgacccaaatgagtacaagcgtatcaaaattgcttgctagtgac
cacaatgtggaacaaactgaattagcctcatcaatagaggaacctaacagcacaaggatt
aacctgcagaacctctcccacgaatatgaacttcttcagagaaaccaggaggaaattaag
gaattattggaagaatttgtaatggatgtgtcctactcgaatgaagagctcttttcctca
ccatcagggtttgactgcactctcagatccagtgatgaaaaaggagaactgctgagcagt
gcaagtagtgagtctgcaagtgaaaatgaaagagttagtacggggaatttggaaaatgag
gaggagtggttagagcaggtggaagaagcagcaaggagaatagccatccctctgtggcag
cactgggacagaggacgagggatgttgcagaccttgcttctctgtctgccaagcacttta
gtaaatgatgggatggtgtcagaagttgaagcccagtgcactacttttgacacggaagag
aaaattgagcttgcagccgcttgtaggacacctgacgcctttgtttatgactttgagtgc
gcagagccaagcctcacatgtgataccgctgcaggcaggtcagaacgaggagagcttaac
ttctctacaaacaacagaattgctgtgttgaacatggaagatttcagaatccacagagca
gcacgaagtgcctcacctgttgaagcctgcaaagcaacagatgcgagctacatcactgaa
atgctggagagccagttcgatattttctggccacccgacaagatggcaaatgtagaagat
gacctattctgtttgacagcaaacacattatgcaaacaatgtggaacaaactcaggactc
tcagaaagcacttttaggcacctcctctactcaggtgcacctgaagacaggagaactgtt
ctgcaagaaaactctcattatagtctgacggaaagaaaaactgattatctgcaagatgtt
ttcagggatacagcagcgtcctgtatagaccgattcagagagctccatgagaaaacggat
tcacacggtgatgccaagatgcaggaatttgaccaggactccttgagcctgtcggacctc
ctgcctgatgatgacatatcaaactttttggatgatgattacctagtttctcacctggat
ccgaccttgctcctcaactttgaggagcaaggaacagttgggcttgatttcgtggatgaa
atcatcaacagtgatcctccggtggcactggaggctaaccacaaagagcagaaagagcag
agccagccaacagacaaaataaaacctaaaagaaaaagacagagagatgccctctctaaa
cagtgtaccgatggaaacttgagagtgaaaaggcaaaaagcaatagattcaccaaaaacc
aaagaggaaactgttgagccaactgtcacccacggtgcagatgctgaaacaatgccagtt
ccaacagagccaatgagacgcccctccaccactccgccaggaatcgtccacgtgtttcct
tcccaatcagccaatcccattcccattcagctgatcacaattccagactcccctgcttac
aaggtggtccagctgtcctcctctccttctccacttattagacttccactccccaacaca
tctgttatgcctacgtacatctttgttcctgctccctctccgacctgcaaacgtcaagtt
ccaccgctctctccagtggatggcgcagtggcgcccgttctgatgagttcatttcagcca
ggttccatgtcagacacagccagcaaagccatgtctccccctgctgcaccaccttcatcc
cccacgaacgagatatccccatgtaaggaggcgcttaagtctcctccagaagtcgaaatc
ccccagggcgtgaaggactacatccagcagtccaaaacacacatgagtcaagcttgccag
catatggagggaggcctgaggctgtccgcccattacgtggacgtgaatgtgagccagaga
gagatggctcgctctgggaaaaacacaaacagatgtctggacaaggagctcatcataact
ggagatatagaccgtcaaaagagctcagtgggacggagtcagatctttgacagcctggat
ggtaaacgctgcagtttgctgcttggcaatgccggcatggggaaaacaactctgatcaag
aagctgtgtctcgactggtccaaagactgcatacctcagtttgactttgtctttttattg
gatggcaaacagctcactttaacagaacctgtccacagcctccagacactgctgctcagc
cggtcctccttcgctcccccctgcatggaccctgaaggagtgtacgctcagatcctcgca
gctcctaaacgtgttcttgttgtttttgatgggtttgacgagctgcgggactatgaaatg
ctgcttcagactcaggagaaggacttggtagcctcactgcaaaaagacagcaaggctcag
gcatttacagtaaagcagctgttctcagggattcttcagagggttctgcttccaggctgc
atgctcctcctcgccatccgcccaagaggcaccgccagccagttgctccgccgcacagat
agctttctggaagtctgcggatttactccagcaaatgtggagacgtatgtgtcccaatac
ttctctgatcctgaacttagagcatctgctttggactatctaaaaatctgcaactacctg
catctcctttgctggaaccccggactctgtcacttagtttgcaacgttttacaacagtgc
aaaagttcagatgccttaccaagaactttaaccaccctctgtcataaggtgctctgtttg
aaaatggaaaaagacagaggaagcccagagtcacttgttgagcccaagagccaaaaaact
gttgaaccgatagaagaaacagaaatctcaaacaattctcagggaaggagaggacacaaa
aataatcgaacaagggccagagcggtagcacgcatttcttctcgcagccaaagggcaagg
aggatgaaaggacaggagaaactggaagaggagaatgcttgcgaggacacaaacaggaca
gagagcagagagttgctgtcccagctttgctctttagcctgggaaggggtcaaatctaac
tcatctgttgttcccagagaacgaactatttccaccaaactgagagcgttcagcttgaag
gcaggcctgctactgtctcagtcactcatgaaaaggacacctgccaaattagaggacagt
gaaggaggaggacgagaagttaacaatgggacggtaggagtagaggagaaagagagcaaa
caaaaaggaggaaatgcagaaacctttgatgagtgtgaagacaacattctgttgtgggcc
aaccctttccttcaaagttatatggctgctgtccatttgtcgttgtcaaggactgtgaca
gaccgctcctttctccagaccctgcctttccagacgggtgcaaaaggccggcggaaatct
cagagggaggagctggagctcacacagcggttcgcattgggcctcttgttccacaacaag
acggagctacagatgcttcattcatactcagacactgtctttagggacatggttgccagc
aagcaggctttggtgatgaaacacctagaaggtctgtccttcggggacctgagttcagct
cagatcttggagatgtgcaactatgtctatgaagcaagtttcacacacaaagagaatgga
cggaacaccggtggcaaaatgctggcccttctggcggtacatattcctgaatttttatca
ttccggggtgttcctctcagccctccggatgtgttcacagtacagaacgctctcagtagg
ggtggagctgagggcagaagtttctgtttggatcttgaagactctgggatacacatctgt
ggacttagagctttggtgggcctcagcaacatcaatacctacagggcctgcatagcagat
gtcctcaccctgtggaaggaactggagaagctgggcgacgaaggtctcctacaaggagca
gtgtctaagttcaagatccatcctctgaaagccacacaggtttgtcacatagagcacctg
gaaagtcttgtcagcatacacacccacaagaggctctcatccagctccagccaatcaggt
tccatcctggcagacggagtgccagctgtcaaagagctatataagctggaatttgagctt
ggcccagaaaacggtcccttggctcttcccaagctgtgggaccttttgcctggtctacat
aaccttcagcacttggatgtggaaaacagtaagattggagacaaaggagcagagaaactg
gcaaatgcattagtctttcttcgctctctggagatactaaatttgtccgagaactgcgta
ggagaccaaggagtgaagaaactagccctcgccttgaaggacctgcccaaactgcactgt
ttaagtctgtacagtaatgtgatttccgacgaaggggcagagagtttagcagctgtcctc
ccacacatggcttctctcacagacctcgacgttaaatataacaagatgacagatgttgga
gcacaaagcttgggagcgagtttgagaaactgcaaaaaagttaaaactttaaggatgtgg
aaccaatgcattccatatggagtttttgagagacttcagcagcaggacagccgcatcctc
tggcattaa
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integrated database retrieval system
