Girardinichthys multiradiatus (darkedged splitfin): 124862372
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Entry
124862372 CDS
T08099
Name
(RefSeq) general transcription factor IIF subunit 1-like isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124862372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmu03021
]
124862372
Transcription machinery [BR:
gmu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
124862372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
124862372
NCBI-ProteinID:
XP_047212202
LinkDB
All DBs
Position
X:complement(17812908..17821464)
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AA seq
535 aa
AA seq
DB search
MTSLAGSSSSTTEYTVRVPKNTTKKYNIMVFNAGDKVNCSSWTQARMERDMSARRIYGEE
ETAESGAGSEFGKKQREEARRKKFGIVTREFKVEDQPWILKVNGKAGRRFKGIKKGGVTE
NASYYIFTQCLDGAFEAFPVHGWYNFTQQAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RLREHEHGEDDEDETEKGGKKKKKGGGKGGDLRIHDLDEDLEMSSDDSDSSMGEDGESKA
KMKTNSGKGKAKKKKQKRNDKDALEDSDDGDYEGVEVDYMSEESSSDEEPTHERPSKAEE
HPKGIDEVSESEEESEEEKQNEDEAKEEEEEEEGKKTPVQMEKKKKKDSSGESDSSDDSD
IEGETASALFMVVNKKRTPPKRPGGRGSAGSSRTGSRPGTPSIDSASTSSTLRAAASKLE
QGKRQIQTPATDSPAAKRLKLEPSSQSPVPSGKSTPQPPSGKSTPSSSDVQLTEEAVRRY
LIRKPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKMVNDKMHFYLTE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccctggctggcagcagctcctcaaccacagagtacactgtgagagtccccaaa
aacaccaccaaaaagtacaatataatggttttcaatgcaggggataaagtcaactgttca
agttggacacaggcacgtatggaaagagacatgagtgctcggcgaatatatggggaggag
gaaacagcggagagcggcgcaggcagcgaatttggcaaaaaacagcgtgaggaggctcga
cgaaaaaagtttggaattgtgacccgagagttcaaagtggaggaccagccttggatccta
aaggtcaatggcaaagctggcaggaggtttaaaggcataaagaagggtggagttacagaa
aatgcatcctactacatttttacacagtgtctggatggagcttttgaagcctttccagtt
catgggtggtataacttcacacagcaggcgaagcatcgaacgctaactgctgaagaagcc
gaagaagagtggggcaggcggaacaaggttgtaaaccacttcagcattatgcttcagaga
cgcctgcgggagcacgagcatggtgaggatgatgaggatgagacagaaaaaggtgggaag
aagaaaaagaaggggggtgggaaaggtggcgacctgcgtattcacgacctagatgaggac
ctggagatgagcagtgatgacagtgacagcagcatgggagaagatggagaaagcaaggca
aagatgaaaacaaattcaggaaaagggaaagcaaagaagaagaagcaaaagaggaatgat
aaggatgcccttgaagatagcgatgatggagattatgagggtgtagaagtggattatatg
tcagaggaaagcagctcagatgaagagccaacacatgaaaggcccagcaaagcagaggag
caccctaaaggtattgatgaggtatcagagagtgaggaagagagcgaggaggagaaacag
aatgaagatgaagcaaaagaggaagaagaggaggaggaaggaaagaaaaccccggttcag
atggaaaagaagaagaaaaaagacagcagcggcgaatcggacagctctgatgacagtgac
attgagggagagactgcttctgctttgttcatggtggtcaataagaagcgcacacctcct
aaacggcctggtggacgtggctccgcaggcagctccaggacaggcagtcgtccggggacg
ccatccatcgactctgcctccacctccagcacactgcgcgctgctgccagcaagctggag
caagggaaaagacaaattcagactccggctactgactcaccggcagccaaaaggctgaag
ttggagcccagcagtcagagccctgtcccctctgggaagagcacgccgcaacccccatca
ggcaaatccactccaagctcaagtgatgtgcagctgacggaggaagctgtccgtcgctac
ctgatccgtaagccgatgaccaccaaagacttgctgaagaagttccagaccaagcgcacg
ggtttgagcagtgagcagacagtcaacgtgctcgcacagatcctgaagcgcctcaatcca
gagcgcaagatggtcaatgacaaaatgcacttctaccttacagagtaa
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