Girardinichthys multiradiatus (darkedged splitfin): 124862828
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Entry
124862828 CDS
T08099
Name
(RefSeq) phospholipid-transporting ATPase ABCA3-like isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124862828
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmu02000
]
124862828
Transporters [BR:
gmu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
124862828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_22
AAA_15
AAA_29
AAA_27
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
124862828
NCBI-ProteinID:
XP_047212931
LinkDB
All DBs
Position
X:23106395..23137788
Genome browser
AA seq
1707 aa
AA seq
DB search
MAIRQFGLLVWKNYLQQKRQILVTLVEILLPLLFSGILIVLRQKVPFQDYPNATIYESFA
VDILPKHFMRELQLGYVPSNSSVVRKVAEDVRASLSLASVRGFETEEQFEEHIRTDPQSH
QILAAVVFEHPFTHDEEPLPLQVSYHLRFTFTPRNAPPKEKSELSPNSDLDWHTFSLFPL
FQLPGPREQHDKEGGTPGYFREGFLAVQHAVDRAIMRSYNRTGADRLLAMTRVVLSRFPY
PNFIYDVFILAIQNQLPLLLVLSFTYTSLNIVRAVVQEKERKLKEYMRMMGLSNWLHWSA
WFLMFFLFLSISVFFVTLLLCIRVSPNGAVLNYSDPTLVFVFLLVFTVATINYSFMISAF
FSRANVAAAAGGFIYFLSYLPYLFLWPRYDLLSHTQKVSACLISNVAMAMGAQLIGMFEG
KGTGIQWSNMFDSVTVDDDFSLAQVLCLLLFDSVLYGLVAWYMEAVFPGEYGVPLPSYFF
LLPSYWCSSPRMALVNEKEEEEDAEKAMKGEFMEEEPAGVVSGIKIKHLTKEFKVGNKTR
LAVRDLTLNMFEGQITVVLGHNGAGKTTTLSMLTGLFPPSRGRAYINGYDICQDMALIRR
SLGLCPQHDVLFDNLTVREHLLFYAQLKGFPKEQISDEVDRIISILNLEDKRHSRSKTLS
GGMKRKLSIGIALIGDSKVVMLDEPTSGMDPSARRATWDLLQGEKRGRTILLTTHFMDEA
DLLGDRIAIMAGGELQCCGSSLFLKNKYGAGYHMVIVKDALCNVSEITRLVHMYVPNATL
ESSAGAELSYILPKESTSKFELLFAELEMNKEELGIASYGASVTTMEEVFLRVGKLVDSS
LDIQAIQLPALQYQHERRSHDWTTDDASSISGLTDVTDFTDSGTLISEDGSNIKLNTGVR
LHLQQFYAMFLKRALYSWRNWKVMVAQFLVPLIFTVVALVVANTFPNHQDAPLLRLALSR
YGPTRVPVALQPRADLLASSLANTYTSQLLAQLGELRNITDFTDYVLTNAKAEGGSFNER
CVVGAAFLGRTTQYSEATAYFNNQGYHTPATALMMVDNALFKVLAGPNASILTGNYPMPR
NLSEAARSQLTEGKTGFAIAINLMYGMASLSSTFALLLVTESSIKSKHIQQVSGVYLSNF
WFSALLWDLVNFLLPCLLMLVVFQAFGVEAFVADHHLVDVLLILLLYGWAIVPLMYLLSF
LFSTAATAYTRLTIFNVISGTATFLAVTIMTIPELNLVNLSHVLDKVFLIFPNYCLGMSF
SQFYQNYEFIKFCTSGPISETICKYLNITYQTNYFSMSEPGVGRFLVSLSVQGVVFNALL
FVIELQCVRTVCRLFTSFGRKHKQMPLLDDAAFLPEDRDVAEERKRVLECQPVVESMVGS
PLILHELSKVYSSGENLLAVDRLSLAVGKGECFGLLGFNGAGKTTTFKMLTGDESVTSGD
AYIDGYSILRDIKKVQQRIGYCPQFDAVLDHMTGRETLSMYARLRGIPEKYVAGCVENVL
RSLLLEPHADKLTRSYSGGNKRKLSAGMALIGGPPVIFLDEPSTGMDPVARRLLWDAVTR
IRESGKAIIITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLAKVHKEE
DLEESDLQLFKDFIESTFPGSQLKDEHQGMVHYHLTDKTLTWAQVFGTLEAAKEKYCIED
YCVSQISLEQVFLSFAHFQHCTQTDRK
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atggcgataagacaatttggactgctggtgtggaaaaactatcttcagcagaaacgtcag
atccttgtaactctagtggagatcctattgccgctgcttttctccggcatcctcatcgtg
ctgcgtcagaaggtgccttttcaggactacccgaatgccactatctacgagagctttgct
gtcgacattttaccaaaacattttatgcgagagctgcagctgggctacgtgcccagtaac
tccagtgtggtgcgtaaggtggcagaggacgtgcgagccagcctgtccctcgcctcagtg
cgtggctttgagacagaggagcagtttgaggagcacatcagaaccgacccccagtcgcac
cagatattggcggctgtcgtctttgaacaccccttcactcatgatgaagaacccctaccc
ctgcaggtgagctaccacctacgcttcaccttcacaccacgcaatgccccacctaaggag
aagtccgaactgagcccgaacagcgacctggactggcacactttcagcctctttcccctt
tttcagctgccaggcccaagggagcagcatgacaaggagggtgggacaccaggttatttc
cgtgagggctttctggccgtccagcatgcagtggaccgagccatcatgcgatcttacaac
agaaccggagcggaccgtctgctggcaatgaccagggtggttctgtcacgctttccttac
cctaactttatctatgatgtcttcatcttggccattcaaaaccagctgcctcttctctta
gtgctcagcttcacttatacgtccctcaacatagtgcgagctgtggtgcaggagaaggaa
cggaagctcaaggagtacatgaggatgatgggcctcagtaactggctgcactggagcgca
tggttcctgatgttctttctcttcctctccatttcagtgttctttgttactctgctcctc
tgtatccgggtgagtcctaacggtgcagtgctgaactacagcgaccccacactggtcttt
gtcttcctgctagtcttcactgtggccaccatcaactacagcttcatgatcagtgccttc
ttctcacgagccaatgtggcagcagcagcaggcggcttcatctacttcctcagctacctg
ccttatttgttcctgtggcctcgctatgacttactgagccacactcaaaaggtgtcggcc
tgccttatctccaatgtggccatggccatgggagcacagcttataggaatgtttgaaggc
aaaggtactggaatccagtggtcgaacatgtttgactctgtgacggtggacgatgacttc
tcccttgcccaggttctttgcttgctgctgtttgactcggtgctttacggcctggtggcc
tggtacatggaggctgtgtttcctggggagtacggagtgcctcttccatcttacttcttt
ttactgccttcatactggtgcagcagccctcgcatggctttagtaaacgagaaggaggaa
gaagaagatgcagaaaaagctatgaaaggagagttcatggaggaagagccagctggagta
gtgtctggaataaagattaaacacctcactaaggagttcaaagtagggaacaagacacga
ctggctgtgcgagatctgacactgaacatgttcgaggggcagatcacagtggtgctggga
cacaatggtgctgggaagaccaccacactgtccatgcttacaggtttgtttccacccagc
aggggcagggcctacataaacgggtatgacatctgtcaggacatggctcttatccgacgc
agtctgggtctctgtccccagcacgacgttttgtttgataacctcacagtgagagagcat
ctgctcttctatgcacagctaaaaggcttccccaaggagcaaatttcagacgaggtggat
cggatcatcagcatcttgaatctcgaggacaagcgtcattctcgctccaagaccctctct
ggcggcatgaagaggaagctttctatcggcatcgccctcattggagactccaaggtcgtc
atgctagacgagcccacgtcgggtatggatccatcagcacgacgggccacctgggacctt
ctacagggagagaagcgaggccgcaccatcctcctcactactcacttcatggacgaggct
gacctgctcggtgaccggatcgccatcatggcaggtggcgagctgcagtgctgcggctct
tcgctcttcctgaagaacaaatatggtgctggctaccacatggtgatagtcaaagacgcc
ctctgtaatgtgtctgagatcacacgccttgttcacatgtatgttcccaacgctacactg
gagagcagcgccggagccgagctctcttacatcctgcctaaagaaagcaccagcaagttt
gagctgctgttcgctgagctggaaatgaacaaagaggaactgggtattgcaagctatggg
gcctcagtgaccaccatggaagaagttttcctcagagttggaaagcttgtggattctagt
ttggacattcaggcgatccagctgccagcccttcagtaccaacacgagagacgctcccat
gactggaccaccgatgatgccagcagcatcagtggcctgacagatgtcaccgatttcaca
gacagtggcacgctcatctctgaggatgggtcaaacattaagctgaacacaggggtaaga
ctccacctgcagcagttttatgccatgtttctgaagagggcgctgtacagctggaggaac
tggaaggtgatggtggctcagtttttggtccctttgatcttcactgttgtggccttagtg
gtggcgaacacctttcccaaccaccaggatgctccgctgctgaggctggccctcagccgc
tacggtcccaccagggtccctgtggccttgcagcctagggcggacctccttgcctcttcc
ttagcgaacacatatacctcccagctcctagcccagctgggtgagctcagaaacatcaca
gacttcacagattacgtcctgaccaatgcaaaagcagaaggcggcagcttcaacgagcgc
tgcgtggtaggtgctgccttccttggcaggaccacccagtattcagaggcaacagcctac
ttcaacaaccagggctaccacacacctgccacagccctcatgatggtggacaatgctctg
ttcaaagttttagctgggcccaatgcatccatcctgacaggcaattaccccatgcctaga
aacctgtcagaggctgcaaggagccagctcacagaaggtaagactgggtttgccattgcc
atcaacctgatgtacggcatggcctcactgtccagcactttcgccctgctgcttgtaact
gagtcctccatcaagtcgaagcacatacagcaggtcagcggcgtctacctgtccaacttc
tggttctctgccctgctgtgggacctggtcaacttcctgctgccatgcctcctcatgttg
gttgtattccaagcatttggagttgaagcttttgtggcggatcaccacctcgtcgacgtt
ctcctgattctcctcctgtacggctgggccattgtgcctctgatgtatctactcagcttc
ctcttctccactgctgccaccgcctacacacgcctcactatcttcaatgtgatctctggg
actgccacgtttctggccgtcactatcatgaccatcccagagttaaacctggtaaacctg
tcgcatgtattggataaggtgttcctgatcttcccaaactactgcctgggcatgtcattc
agccagttctaccagaactacgaattcataaagttttgcacctcaggtcccatcagcgaa
acaatctgcaaatacttaaacatcacataccagacaaactacttctccatgtcagagcct
ggtgtgggtcgcttcctggtgtccctctcggtgcagggtgtcgtcttcaatgctctgctg
tttgtcatcgagctgcagtgtgtccgcactgtctgcagactcttcacctcttttggcaga
aaacacaaacagatgcctctgttagatgatgcggcgttccttccagaggaccgggatgta
gctgaagagaggaagcgggtcctggagtgccagccagtggtggagtccatggttggcagc
cccctcatactgcatgaactcagcaaggtttatagcagcggggagaaccttctggctgtg
gacaggctgtctctcgctgtggggaagggtgagtgttttggcctcctgggctttaacgga
gcaggaaagaccacaacgtttaagatgctgaccggtgatgagagtgttacatctggagac
gcctacatagatggctacagcatcctgagggacattaagaaggtgcagcagcgcataggt
tactgtcctcagtttgatgctgtgctggaccacatgacaggaagagagacgctgagcatg
tacgccaggctcagaggaatcccagagaagtatgtagctggctgtgtggaaaacgtcctg
agatcactgctgctggagcctcatgctgataaactgacccgcagctacagcggtggtaat
aaaaggaagctaagtgcgggaatggctttgattggtggacctccggtcatcttcctggat
gagccttccacagggatggaccctgtggcccggaggctgctgtgggatgcagttacacgc
atcagggagtctgggaaggctataataatcacttctcacagcatggaagagtgtgaggcc
ctttgtaccaggctggcagtgatggtaaacggtcagttcaagtgcctcgggagtccccaa
cacctgaagagcaagtttggcagcggctacacgctactggctaaagtacacaaggaggag
gatttggaggaaagcgacctgcagctttttaaagacttcattgaaagcactttcccagga
agccaactcaaagatgagcaccagggaatggttcactaccatctgactgataaaacactg
acctgggcacaggtgtttggcactttggaggcagccaaagagaagtactgcattgaagac
tactgtgtgagccagatttccctggagcaagtattcctcagctttgctcatttccaacac
tgcacacagactgacaggaagtag
DBGET
integrated database retrieval system
