Girardinichthys multiradiatus (darkedged splitfin): 124862848
Help
Entry
124862848 CDS
T08099
Name
(RefSeq) LOW QUALITY PROTEIN: trinucleotide repeat-containing gene 6B protein-like
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124862848
03036 Chromosome and associated proteins [BR:
gmu03036
]
124862848
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124862848
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
124862848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
124862848
NCBI-ProteinID:
XP_047212976
LinkDB
All DBs
Position
X:complement(14447385..14464729)
Genome browser
AA seq
2008 aa
AA seq
DB search
MCAFLFXRQENQEGEQQFMEDKKKKKEEKKKRETSQKVPEQKIKVPEPAKPSCSQPLTAP
GSVSPSSGPVSPSSPSPGAGGGSAQVPPGGGNNAKQRTAVANGQPSSSSPSGSQSSQQRY
MSREVPPRFRCQQDHKVLLKRGQPPLSSMLVGGGDSSTGGVGGGSGWDGSPSLQGPDSPN
ANTDGNTDSNVGSSSPSPPSSSSFCVAALSSSTTTSTYANSTWGAGSSSQSSSQGCRKVF
MDGTDLDDWPSITAGPKLSSEGAGGEVQEQDCPGNNNSSASWGEINMQQKGGTAGGGEGN
LDNLFPPCSSALSSSSSPNECAQPSGVWVSSTSSQVEVGQGSAASYNSKVSHLPGSQESP
LGGSSSVPGANFNPNVNPSAWPALGQGGTAVSACSGSLQHSSMTSTFSFSASTTVITTQT
LSSVNQTGLYQQHTETAVEAKTGEQQQHLGNPVLGPCSGGAMKEAGPNQEGSNEENKVDG
EGEASENFSGSSSSSSAASSSWRAMPPVSSELGTGASQADGWGGGGTGPEGQEGNVWRFD
SQDEKAGWGKGTGGGPVKPVVSQGAWEGGSTEANWGGTSESISSINLAIGSGEVEGSSIS
SSTDSVGGGGSCSEESASQNLATMTKALDNQKGIEGGDGTVGEWGGVGGQGVAVGGGGRH
SSSSGSGSVAGSGSGHERSAQHCSNQSSQAEVALVSMLNRSDLDPRVLSNTGWGQTQIKQ
NVAWDLDTSKGVGKGNERNPSSSSALSSVTINTTTIRSSRYPSESGSVSNDASPGSLNSA
SATSRDNWDGGTTQPTGGPFMPSSTIRKPGSPEDNIMGGQGKSAGGWGELPSEKEGKGWR
ADDQQWGGHRGGRKNWQDFEKQGSGWGDGADDKGTGGWKGSTRGETSGWGEEWGKRDSTS
GAGWGDGRSRVGGNSDEGSSWGKLDEEGSQRGGWGGGGDVGGGKSHKDWGSAKPNTAPIP
NSHVAPTKAQNQQQQQSQGQHPPGGWNNRPSVGGGGQLSKNQNQSLGWTSGPIPQISGGV
SDSMEPSGWEEPSPQSISRKMEIDDGTSAWGDPTRYNNKNVNLWDKKSTAPGPNHSQQGP
PPPMQQQPPRRQHSINTNPGSAAVGMWGGGAQSVDDGTTAWGQTSDAPTGWGEPDDSSKP
SGWRNPSPNPSKPGVKSVESWGGKGESSIVASRHPSWEEDEDSGGGVWNSTGSQGSSSSF
NSGGWGQSHAGKRGNIKSGGGDSWMNPVSRQFSNMGLLGDDPGVEKKIDGDKRGINDYNG
EMRRGGRSGGGYRMPSSKDMGSGDIGPYGDKMGGHGMFVAGGGGMPQPRGMHQPGMHSMN
PSPGLRAQVPHQFLSAQVPGPMLKQMSSPGGSVGGVGGVGSVGGVGGVGGGVFPPQISPQ
QLAMLSNIYPHMQQQFHLACQLLIQQQQQQQLLQNQRKFPQPQPLRQQTDTQQLARIMAI
LQQQRQQQQVGVGGATSGGGNSKLSPSHLGGGVSKQSMGDPLPHTGIGGPLSDLHAKTQG
MYTGLSAGGNLSTLELSPMMGGMKDMSGQQSRFKWMMEGHSPAPSPPDTALHKNGPLPSA
IKVRGGSPYSQYEMLGSEGLGIPPQGSADSWHRTPGSKMGNKPATSSWPPEFQPGVPWKG
IQSTGDPESDPYMTPGRVLGSPSSPNLNDPDHPLLRDNIGPNPSLNTSLPSPGAWPYSAS
DNSLSNAHSTGKYSEYKPSWPPEPIGQNKLWKTNRNSSQLPRPPPGLANQKQASPSPWGT
GGPRLARSWGGMNQESRFGSGSAWSDDGTSRSSCWLLLRNLTPQIDGSTLRTICMQHGPL
LTFHLGLTQGSALVRYNSRQEAAKAQGALHMCVLGNTTILAEFVSEEEVARHFAHSQTEG
ASSGGAAGNGAPNSSGTGTAVASSGGSSPGSERPAVGTSSGGNGNGGAAVERLPSSGWQS
LDNTGTSSETSSAQGPGLAIFSQWSTNGAGEGGVGGVESGRSGLWGGINAGYSSSSLWGA
PQMEERHQMDSSAGLLPGDLLGGGADSI
NT seq
6027 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcatttcttttcnacagacaggagaatcaagaaggggaacagcagttcatggaa
gacaagaaaaagaagaaagaagagaaaaagaaaagggaaacctctcagaaggtgccagaa
cagaaaatcaaagtgccagaaccagccaagccctcctgttcccagccactcaccgcccca
ggctcagtgtcccccagctctggcccagtttccccatcatcacccagtcctggtgcaggt
gggggttccgcccaagtccctcctggtggcgggaacaatgcaaagcagcggactgctgtg
gccaacggacagccctcctcctcgtctccttctggaagtcaaagttcacagcagcgatac
atgtctagagaagtcccaccacgatttcgctgccagcaggaccataaagtgctactgaag
aggggccagccaccgctgtcctccatgctggtggggggaggggattccagtacaggagga
gtcggaggaggcagtggctgggatggttccccatctttacaggggccagatagccctaat
gcaaacacagatggaaatacagattccaacgtgggttcatcttccccttcacctcccagc
tcatcctcattttgtgttgctgctctgtcgtcttctactactacttcaacttatgcaaat
tccacatggggggcaggctccagcagccagtcctcctctcagggctgcaggaaggtgttt
atggatgggactgacctggatgactggcccagcatcactgctggccccaaactgagttct
gaaggggctggaggagaggtgcaggaacaggactgccctggtaacaacaacagtagtgcc
tcatggggggagataaacatgcagcagaagggaggaacagcaggaggaggagaagggaac
ctggacaatcttttcccaccttgctcttctgctctttcttcttcctcctcgcctaatgaa
tgtgctcagccaagtggtgtgtgggtgtcttccacttcgtcccaagtggaggtaggccaa
ggctcggcagcatcttacaattccaaagtctcccatcttcctgggtctcaagagagccct
ttgggtggcagcagcagcgtccctggtgccaatttcaaccctaatgtgaacccctctgcc
tggcctgccctggggcagggcgggaccgccgtttcggcttgcagcggctcattgcagcac
tcgtccatgacttcaactttctcattttctgccagcaccactgtcatcaccactcaaaca
ctttcatctgtgaatcaaactggtctttaccagcagcacactgaaaccgctgtggaagcc
aagactggagaacagcagcaacacttaggaaatccagtgctggggccatgttcaggcggg
gcgatgaaagaagccggaccaaatcaggaaggcagcaatgaggaaaataaggttgatggt
gaaggtgaagcgagtgagaatttttctggctcttcgtcttcctcctctgctgcctcttca
tcttggagggccatgcctccggtgtcctctgaacttgggacaggtgcctcacaggcagat
gggtggggcggagggggtactggacctgaggggcaggaagggaatgtttggaggtttgat
agccaggatgaaaaagcaggatggggcaagggaactggtggagggccagtcaaaccagtt
gtatctcagggagcttgggaaggagggagtacggaagcaaattggggtggcacttcagaa
agtatcagttctattaatttagcaataggaagtggagaagtggaggggagcagcatcagc
agcagtacggacagtgtgggtggtggtggcagctgttcagaggaatctgcctcacaaaat
ttagcaactatgacaaaagctttggacaatcagaaagggattgaaggtggggatgggacg
gttggggagtggggaggagtaggagggcagggtgttgccgttggaggtggtggaagacat
tcatcatctagtggcagtggatccgtagctggaagcggaagtggacacgagcgctctgcg
cagcattgttccaaccagtcctcccaggcagaagtggccttagttagcatgctcaaccga
tctgacctggaccccagggttctgtccaacacgggctgggggcagactcagataaagcaa
aatgtggcctgggacctggacacctcaaaaggtgtagggaaaggaaatgaaagaaaccct
tcatcttcctctgcattatcatcagtaaccataaacactaccactattcgcagttctagg
tacccatctgagagtggttcggtgtcgaatgatgcgtcgcctggcagcctaaactctgct
tctgctacatccagggataattgggatggtggtactacacagcccactggtggtcctttt
atgcctagtagcaccataaggaagccgggatcaccagaagacaatataatgggtggccaa
ggaaagtcagcggggggatggggagaactcccatctgagaaagagggcaaaggatggagg
gcggatgaccaacaatggggaggtcacaggggaggaaggaaaaactggcaagactttgaa
aaacagggtagtgggtggggagatggagcagatgacaaaggaacagggggatggaaggga
tctacaagaggagaaacgagtggttggggagaagaatggggaaagagagactccacatct
ggagctgggtggggagatgggaggagtagagtcggaggcaactctgatgagggatcctcc
tggggaaagctggatgaagagggatctcagcgtggaggatggggaggaggaggagatgtg
ggtggaggcaaatcccacaaagactgggggagcgccaaacccaacacagcaccgatacca
aacagccatgtggcaccaacaaaagcccaaaatcaacagcagcagcaatcacaggggcag
catccaccgggagggtggaacaaccggccaagtgttggaggcggaggtcaactttcaaag
aaccagaaccaaagtttgggctggacctctggcccaattcctcaaatatctgggggtgtc
agtgactccatggagcccagtggctgggaggaaccttcccctcagtccatcagtcggaaa
atggaaattgatgatggcacatcagcctggggagacccaacgcgctacaacaacaagaat
gtgaacttgtgggacaagaagagtactgcaccgggcccaaaccacagtcagcagggcccg
ccaccaccaatgcaacaacaacctccaagaaggcagcatagcatcaacacgaaccctggc
agtgctgcagtgggcatgtggggaggaggtgcacaaagtgtggatgatggtacaacggct
tggggccagacatcagatgctccaacaggctggggtgaaccagatgattccagcaaacca
tctggctggaggaacccttcacccaaccctagtaaacctggagtaaagtcagtagaaagc
tggggcggaaagggtgagagctccatcgtagcgtccaggcatccaagctgggaggaagac
gaggacagtggtggtggagtctggaacagcacgggttctcagggaagcagctcttcattt
aactctggaggctggggtcagagtcatgctggaaagaggggaaacatcaagagtggagga
ggagacagctggatgaatccagtgtcacgccagttttccaacatgggtctcttgggtgac
gatccaggtgttgaaaaaaaaattgatggggacaagagaggaataaatgactataatgga
gagatgcgaagaggaggaagaagtggaggagggtaccgcatgcctagttccaaagacatg
ggttctggtgacattggaccctatggtgataagatgggtggccatggaatgtttgttgcc
ggtggaggagggatgcctcaacctcgagggatgcaccagcctggcatgcattcgatgaac
ccctccccagggttacgggctcaagtgcctcatcagttcctgtctgcacaggtgccgggt
cccatgctgaagcagatgtcctctcctggtggcagcgtggggggagtaggaggtgttgga
agtgtcggtggggtcggcggcgttggtggaggagtcttcccacctcagatttccccacag
cagcttgcaatgctcagcaacatttaccctcacatgcagcagcagttccatctggcttgt
cagctcctgatacagcagcagcaacagcagcagcttctccagaaccagaggaagttccca
caacctcagcctctgagacagcagacagacacacagcagctggcgaggatcatggctatt
ctccagcagcagaggcaacagcagcaggttggagtgggaggagcaacatctggaggagga
aactccaagctgtccccctctcacctgggaggaggagtgtccaagcaatccatgggagac
cctcttccacacactggaatcgggggtcccttatcggatcttcatgccaaaacacaagga
atgtacactgggctttcagctggtggtaacctgtctacactagaactcagtcccatgatg
gggggcatgaaggacatgagtggacaacagtcccgctttaaatggatgatggagggacat
tccccagctccctctcctccggacacggcccttcacaagaacggccctttacccagtgcg
ataaaggttcgaggagggtctccttactcccagtatgaaatgctgggcagtgaaggttta
gggatcccacctcagggctctgcagacagctggcaccggactcctggtagtaaaatggga
aacaaacctgccacttcaagctggcctccagagttccagcctggtgtgccatggaaagga
atacagagcacaggggacccagagtcggatccctacatgacccctggcagagttcttggc
tccccatcatccccaaacctcaatgatcctgaccacccgttactgcgagacaatataggg
ccaaacccgtccctcaacacctcgctgccttcacctggtgcctggccctacagtgcctca
gacaactccctcagcaatgcacacagcacaggaaagtactccgagtacaagcccagctgg
cctccagagcccatcggacaaaataagttatggaagaccaaccgcaatagctcacagctg
ccgcgcccccctcccggcctagccaatcagaagcaggcctcgccctccccgtggggaact
ggaggtccacggttggcccggagctggggagggatgaatcaagagtcaagatttgggtca
ggctcagcttggagtgatgatggtacctctagaagcagctgctggctgctgctgagaaac
ttgacccctcagattgatggctccacactgaggactatctgtatgcagcacggccccttg
ctgaccttccacctgggcctaacccagggcagcgctctggttcgatacaacagccggcag
gaggcagccaaggctcagggtgctcttcacatgtgtgttctgggaaacaccacaatcctg
gctgaatttgtgagtgaagaagaggttgcacgccattttgcacattcccagactgaaggg
gccagctcaggaggagcagcaggcaacggagcgcccaattcatccggaacgggaacagct
gtggccagcagtggtgggagctccccggggagcgagcgaccagcggtgggcacatcttca
ggtggaaatggaaatggaggtgctgcagtggaaagattgccaagctctggatggcagagt
cttgataatacaggcacttcttcagaaacatcttcagcccagggaccagggcttgcgata
ttctcccagtggagcactaacggggcaggggaaggaggtgttggcggagtggagagtggg
aggtcggggctatgggggggcataaatgcaggttactcgagcagcagcctgtggggagca
ccacaaatggaggaaaggcaccaaatggacagctctgctggactgttgcctggcgacctg
ctggggggaggggccgattctatctga
DBGET
integrated database retrieval system
