Girardinichthys multiradiatus (darkedged splitfin): 124863075
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Entry
124863075 CDS
T08099
Name
(RefSeq) DNA polymerase lambda-like
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03410
Base excision repair
gmu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124863075
03450 Non-homologous end-joining
124863075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmu03400
]
124863075
Enzymes [BR:
gmu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124863075
DNA repair and recombination proteins [BR:
gmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
124863075
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
124863075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT_2
BRCT
DUF1179
PTCB-BRCT
LIG3_BRCT
Roughex
Motif
Other DBs
NCBI-GeneID:
124863075
NCBI-ProteinID:
XP_047213283
LinkDB
All DBs
Position
X:complement(15817291..15823624)
Genome browser
AA seq
528 aa
AA seq
DB search
HGFTVYLLPAGIGNARCQIFHRQIQQNGGQIESSMSPCVTHVVVDDTMDRDRALRLLKVY
QLPSGVHLVKCTWLSLCISEKRLLDDEDYSLLTKRISFSESKHDGKQKQSGPVEHCAETT
TEPESHLTKQEETIDTTIPEDKEEAHREEDGVSQDDLEALLTGQHPEEETPGSDTNSGPD
AAADARKPMPGKWVCAQSSQSKSKNFNKHITDKLEVLAKAYTHQGDKWRALGYSKAVNAL
KSYHKPVKSYQEACQIPGIGKRMADKIEEIMESGHLRKLDHIGEAVPVLELFTNIWGAGA
KTAQLWYQQGFRTLEDIRTKAHPSNTQKIGLKHYDDFLDRMPREEAAAIEKVVKDAVHAV
DANLVAMACGSYRCGKATCGDVDVLISHPDGKSHKGVFSKVLQILHDSGFLKDDLVSHEE
NGEQKKYMGVCCLPGPGRRHRRLDVIVVPYNEFACSLMYFTGSAHFNRSMRALAKTKNMS
LSEHSLNKDVVRQGSLKVYGGTPLPTPTEKDVFNLLGIPYRAPQERDW
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
catggattcacagtgtaccttctgccggctggaatcggaaacgccagatgccaaatcttc
cacagacaaatccaacagaacggagggcaaatcgagagttccatgtccccttgtgttact
cacgttgttgttgatgacaccatggaccgtgacagggctctgcgcctgctgaaagtgtat
caactgccctctggtgtccatcttgtgaaatgcacatggctaagcttgtgtattagtgag
aagagactcctggatgatgaagactacagccttttaaccaaaagaataagtttttcagaa
tcaaagcatgacggcaaacaaaagcaatcaggacctgttgaacattgtgcggagacaacc
acagagccagaaagtcatctaaccaagcaagaggagacgatagacacaacaatcccagaa
gataaagaagaagctcaccgagaggaagatggcgtctctcaggacgacctggaagctctt
ctcaccggtcagcaccctgaagaggagactcccggctccgacacaaactccggtccggat
gctgctgctgatgctcggaaacccatgccaggaaagtgggtctgtgctcagtcttctcag
tccaaaagcaaaaacttcaacaagcatatcacagacaagctggaagtgctggccaaggcc
tacacacatcaaggagacaagtggagagcactgggctactccaaggctgtcaacgcactg
aagagctaccacaaacccgttaaatcatatcaggaagcttgtcagatcccgggaatagga
aaacgcatggcggacaaaatagaagaaataatggagagtggccacctgcggaagctcgat
cacattggagaggccgtgcctgtcttggagcttttcaccaacatctggggtgcaggagca
aagacggcacaactttggtaccaacagggttttcgcacgctggaggacatccgaacaaaa
gcccacccaagcaacactcagaaaataggactgaagcactacgatgattttcttgaccga
atgccaagagaagaggcagcagctatagagaaagtggtgaaggatgctgtacatgctgtc
gatgccaacctggtggcaatggcgtgtggctcctaccgttgtgggaaagctacatgcgga
gatgtggatgtgctcatctctcaccctgacggcaagtcccacaaaggagttttcagtaaa
gtgttacagattctccatgacagtgggtttctaaaagatgatctggtgagccacgaggag
aacggagagcagaagaaatacatgggggtgtgctgtttgccagggcctggccgccgccac
cgcaggttggacgtcatcgtcgtgccttacaacgagtttgcctgctcgctcatgtatttc
accggctcggcccacttcaaccgctcaatgagagcactggcaaagacaaaaaatatgagc
ttatcagagcactctttaaacaaagatgtggtacggcaaggcagcttgaaggtgtatggt
ggcaccccgcttcccacaccgacagagaaggatgttttcaatcttttagggataccatac
agagcacctcaagaaagggactggtga
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