Girardinichthys multiradiatus (darkedged splitfin): 124863178
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Entry
124863178 CDS
T08099
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04120
Ubiquitin mediated proteolysis
gmu04137
Mitophagy - animal
gmu04144
Endocytosis
gmu04340
Hedgehog signaling pathway
gmu04350
TGF-beta signaling pathway
gmu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124863178
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
124863178
04350 TGF-beta signaling pathway
124863178
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124863178
04137 Mitophagy - animal
124863178
09144 Cellular community - eukaryotes
04520 Adherens junction
124863178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124863178
04121 Ubiquitin system [BR:
gmu04121
]
124863178
03029 Mitochondrial biogenesis [BR:
gmu03029
]
124863178
Enzymes [BR:
gmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124863178
Membrane trafficking [BR:
gmu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
124863178
Autophagy
Mitophagy
Other mitophagy associated proteins
124863178
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
HECT type E3
124863178
Mitochondrial biogenesis [BR:
gmu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
124863178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
124863178
NCBI-ProteinID:
XP_047213402
LinkDB
All DBs
Position
X:13122802..13188266
Genome browser
AA seq
768 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLNKL
SPNDSDTVRGQIVVSLQSRDRIGSGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPGRPLSCIVDENTPVSTNGATPTTALPASDQRAQERRVRSQRH
RNYMSRTHLHMHPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEELGP
LPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPSSNGSRGGSESQNVSRQN
QTKDQAQQALVSPGQLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGHCRIEVSRE
EIFEESYRQVMKMRPKDLWKRLMVKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYS
RDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKPITLD
DMESVDPDLHNSLVWILENDITGVLDHTFCVEHNAYGEIIQHELKPNGKSIPVTQDNKKE
YVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIVCGLGKIDINDWKSN
TRLKHCTPDTHIVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTI
HQIDASTNNLPKAHTCFNRIDIPPYESYDKLYDKLLTAIEETCGFAVE
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaaggagtccggcggaatggccccgtcaaactgagattaacagtcctgtgt
gccaaaaacctggcaaagaaagatttcttccgcctccctgatccttttgccaaggtagtc
gtggatggttcaggccagtgccactcaacagacactgtgaggaatacgctcgaccccaag
tggaaccaacactatgatctgtacatcgggaagtcagattcaatcaccatcagtgtgtgg
aaccacaaaaagattcataagaagcaaggggctgggttcctgggctgtgttcgccttctg
tctaacgccatcaaccgccttaaagacacaggctaccagagactagacttgaacaagttg
agccccaacgacagtgacacagtcagggggcagattgtagtgagccttcagtcgagggac
cgcatagggtcaggaggtcccgtggtggactgcagtcggctgtttgacaatgatcttcca
gatggctgggaggagaggaggactgcatctggacgaatccagtacttgaaccacatcaca
cgcaccacacagtgggagaggccaaccaggcctgcatcagagtattccagccctggacgg
ccactcagctgcattgtagatgagaacacccctgttagcacaaatggcgccacgcccacc
acagcattacctgccagtgaccagcgggcccaggagaggcgggtgcgatcgcagcggcac
cgcaactatatgagcagaacccacctgcacatgcacccagaccttcctgagggatacgag
caaaggacaacgcagcaaggtcaagtttacttcctccacactcagacaggtgtcagcaca
tggcatgaccctagggtacccagagacctgagcaatgtgaactgtgaggaacttggtcct
ctaccaccaggatgggagatccggaacaccgccacagggagggtttacttcgttgaccac
aacaaccgaaccacgcagttcacagacccacgcctctcggctaacctgcatctagttcta
aatccaagttccaatggttctcgaggaggcagcgagagtcaaaacgtcagtcgtcagaac
cagacaaaggatcaggcccagcaggctctggtgtcccccggtcagctcccggaagaggca
gagtgtctcaccgtgcccaaatacaagagagacctcgttcagaagcttaagatcctgcgt
caggaactgtcccagcagcagcctcaggccggccactgtcgcatcgaggtgtcccgcgaa
gagatctttgaggagtcatatcggcaggtgatgaagatgaggccaaaggacctatggaaa
cggttaatggtgaagttcagaggtgaagaaggcctcgactatggaggagtagccagggaa
tggctctatctgctgtcgcatgagatgctgaacccatactacggcctgtttcagtactcc
cgcgatgacatctacacactgcagatcaacccggattctgctgtaaatcctgagcatttg
tcgtactttcacttcgtcggccgcattatggggatggctgtgttccatggccactacatt
gacgggggttttactctgcccttctacaaacagctgctgggtaaacccatcaccctggat
gacatggagtctgtagatcctgacctgcacaacagcctggtttggatcctggaaaatgac
attacaggtgtgctggaccacaccttctgtgtagagcacaatgcgtatggagaaatcatc
cagcatgaactcaagccgaatggtaaaagcatccctgtcacacaggacaacaagaaggag
tatgtccgcctctacgtcaactggcgcttcctgcgaggcattgaagcccagttcttggcc
ctgcaaaagggctttaatgaggtcatccctcaacacctgctcaaagctttcgatgagaag
gagctggagctgatcgtctgcggcctgggtaaaatcgacatcaacgactggaagtccaac
acgcggctgaagcactgcactccggacacccacattgttaaatggttctggaaagctgta
gagtctttcgacgaagagcgcagagcccgactgctgcagtttgtcacaggttcctccaga
gttcctctgcaaggttttaaggcccttcaaggtgctgctggaccacgactcttcactata
caccagattgatgccagcacgaacaacctgcccaaagcccacacctgctttaaccgaatc
gacattcctccctatgaaagctatgacaaattgtatgacaagttacttactgccattgaa
gagacgtgtggctttgctgtggagtga
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