Girardinichthys multiradiatus (darkedged splitfin): 124863256
Help
Entry
124863256 CDS
T08099
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124863256
Enzymes [BR:
gmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124863256
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
U-box type E3
124863256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-C3HC4_2
zf-CCHC_2
zf-C3HC4_3
U-box
zf-CCHC
zf-RING_2
zf-RING_5
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
124863256
NCBI-ProteinID:
XP_047213521
LinkDB
All DBs
Position
X:9056671..9079156
Genome browser
AA seq
1676 aa
AA seq
DB search
MAHIHYKFSSKLSYDTVVFDGPNISLTDLKKQIMAREKLRAGDCDLQITNAQTKEEFTED
GVHIPKGSSVIVRRIPIIGKSSSHSKTNHKERSDVHIPNAFGSHRKISDSSSTRALWFFS
KMQLANLAEADVSEEDKIRVMMNQSSCEMMKNSKLGPVLPENYTCYRCGNTGHHIRNCPD
KNVEAPPRIKKSTGIPRSFMVEVDDPNIKGVMLTSCGRYAIPAIDAEAYAVGKKEKPPFI
LQEQPKCEEKEEPIPDELLCLICRDLLSDAVVIPCCGNSYCDDCIRTTLLESEDHLCPTC
GQSDVSPDTLIANKFIRQAVNNFKKDLGCGKSQRTMSVATQSQNTAPKPSPVLILTRPNV
QNKIKKPLQSPCAEQESLVNKPKPKPSPSLPQSTDGPPATPEPAPVGNSSENTSPQPEQS
LAVIPNKEELEKTHDSLETVAPSDLVSDRDSPDAPSQLISQVNSMEGTEQLQTDCVNQRQ
SSSHSTTRPSRSSSRDSICSTSTYPAGSLTESSLEQPKTSSSSSSCSSLPTTPLPLFPSP
PFHTFVHTHQPLSSYFPGYPPTTPTWKLPIPPGAPIPSLCSSSSTSSIPVLIPKEWYRFQ
RKKKERSPHKRSVSHSVSKSSKSKSSRSYSGSSSRSGSRSRSRSSHRSPNTNHRDFHSHS
NHSRSFGYKRSRSPMPSSSSSPLSGSHSRSKMSSDRSRKNCHHSKRSALSSHSSKRRGER
SSREARKSSRSKGLNDISDLKLERQCYLQWKKEYQEWYKKYFSSCISHFHQLPFPPPPPP
PPPNTQDSIYLKQGGETVRKDDGCPTSEDSTYIRSSSSHSSNDRRSPICHPSSDSFSSPQ
SNGSQSSPSHSSNDGPSAPSGAQLQLKDNLEKGTEKVSSLPDFLTKSSEEINLQEMITDD
NPQIKKKVDDCSPLKHKQKKKPEKFESSDSSGSINVLRQDKRRRNTEPNSCKDGSPVGHE
ETASDSLKLVQALLKPNRRLDKDKKEKPKEEILEREQGSRIGKGSDSCQNRKRKHKTKPS
TDSDRLGTEVHQHPEGSKTPERDKKRKKQDKEINNQPSDIPSKTKSNKYLQPKTAEQPNS
LKRESLKPSDRRTQSTEKKSNNASPLTKKDIWEGGIKVISQKKISININLDGKRKDEKTE
QNSSSSGVSTQERKEPSSDTEEKFKKENTETVVNENKESSPGLLPQEKPSIWQEIKESGN
KATSNVDHKDVSMKIPREKEKDGEKNKKGEEDLDLWHCALKGLEDKKERTTGKEEEADKG
KDGCRDQKMVLKKGSTSRENRGEAQKEDKAVRSSSQRSKPKNLHDRQNDASKHSSSDTEG
RQEMTAGGKLLEDLSKGRAKVSQTEPTQVLHSKWGKNEKDVTTREVKATQPKPSETRNNT
ESVGDNEQKSLRSVERGRDRNRVAVGGRDQEKERNSASSGSYSTVAPSCDSERERDKERT
RENERRRESERSKQGMREEERRDWDAPVSKRNLSSSHSSHLSVSNNTENRGLLRESVQSF
SSHSRKSSRYTYMPDQNAAKRHRDASLDFNSKDKDHFDYSYHRPAADYGYKDRPAGTQHS
PPAYSYCRDRGTHSFEPPAGSQRGLIDWELMQNKNRTESRVQKEEKPGKERKTLGDGKRE
REYSEVVGGRESGSQEERAQRLDERRRSSSSSSSSVRSSASRRSSRDEQREGKEAY
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atggctcatattcattataagttctcctccaaactcagctacgacacggtggtttttgac
gggccgaacatctcgctgactgacttgaaaaagcagatcatggccagggagaagcttaga
gccggggactgcgacctgcagatcacaaacgcacagaccaaagaagagttcacagaagat
ggtgttcacatccccaaaggctcctctgtcatagtcaggagaatccctatcattggaaag
tccagttcacatagcaagaccaaccacaaagaaagatcagatgtccatattcccaatgcc
tttggatcccacagaaaaataagtgactcaagttctaccagggctttgtggtttttctcc
aagatgcagctggctaacttggcagaagcggatgtctcagaagaggataagatcagggtt
atgatgaatcagtccagctgtgaaatgatgaagaactctaagcttggccctgtccttcca
gagaactatacctgttatcgctgtgggaacactggacaccacatcaggaactgtccagat
aaaaatgttgaagctcctccacggataaagaagagcacgggaatccctcgttccttcatg
gttgaggtggacgatcccaatattaaaggagtcatgctgaccagttgtggacgctatgca
attcctgccatagatgctgaggcatatgctgttggaaagaaggagaagcctcctttcatt
ctacaagagcaacctaaatgtgaagaaaaggaagagcccatacctgatgaactcctttgt
ttaatatgccgtgacctgctgagtgatgctgttgtcataccctgttgtggaaacagctac
tgtgacgattgtattcgaacaaccttgcttgagtcagaggaccatctgtgccctacatgt
ggccaatcagatgtctcccctgataccttgatagccaataaatttattagacaggctgtt
aacaattttaaaaaagatctaggctgcggcaaaagccagagaacgatgtctgtcgctacc
cagtctcagaatacagctccaaaaccaagccctgtcctgattctgacccgtcccaacgtt
cagaacaagatcaagaagcctctccagtcaccctgcgctgagcaggagtctcttgtgaac
aagcctaaaccaaaaccgtccccatcgttaccacaaagcactgatgggccccctgcaact
ccagagcctgcccctgttggaaactcctctgagaacacttctccccagcctgagcaaagc
cttgctgtgatacccaacaaggaggaattagaaaagacacatgatagcttagagaccgtc
gctccatctgacctggtttcagacagagattcccctgatgctccatcccagctgatttca
caggtaaactctatggaagggacagaacagcttcagacagactgtgtgaatcaaaggcaa
tcctcttcacattcaactacaagaccctctagatcatcctctagggacagcatctgctcc
acctccacatatcctgctggaagcttgactgaatctagcttagagcagcctaaaacgtcc
tcctcttcatcatcatgctcttcattaccaaccacacctttgcctctctttccctcccct
ccttttcacacatttgttcacacccaccagcctctcagcagttacttccctggataccca
ccaaccacacccacctggaagcttccgatcccacccggagccccaatcccttccctctgc
tcctcctcttccacatcctccatcccagttttaatccctaaggagtggtacaggtttcag
agaaagaaaaaggaaaggtcacctcacaaacggtccgtttctcactctgtttcaaagtcc
tccaaatccaaatcttcccgctcctactctgggtcatccagtcgttctggttcccgctcc
cggtccagatcaagtcatcgctctcctaacaccaatcacagagacttccacagccactct
aaccactccaggtcttttggctacaaacggtctcgctctcccatgccgtcctcatcttct
tcacctcttagtggctcccattctaggtccaagatgtcctcggaccgcagccggaagaac
tgccaccacagcaagaggtcagctttaagcagccacagctcaaagaggcgaggggagcgc
tcatccagggaggcaagaaaatcctcacgttctaagggtttgaatgatataagtgatctg
aagctggagaggcaatgctaccttcagtggaagaaggagtaccaagaatggtataaaaaa
tatttcagtagctgtatcagccattttcaccagctgcctttccctcctcctcctcctcca
ccaccaccaaatactcaggactctatctacctaaaacaagggggagaaacagtcagaaag
gatgatggttgtccaacatctgaggattccacttacattcgctcttcttcctctcattcc
tcaaatgaccgtcgctccccgatatgtcacccctcaagcgacagcttttcatcccctcaa
tccaatggcagccagtcttcaccctctcattcgtccaatgatggaccctctgcaccatca
ggagcccagcttcagttgaaggacaacttggagaagggcaccgagaaggttagcagtcta
ccagactttctaacaaagagcagtgaggaaataaatcttcaagaaatgataacagatgac
aatccacaaataaagaaaaaggtcgatgactgtagccccctgaaacataagcaaaagaag
aagccagagaagtttgaatcctccgattcttcaggctccataaatgttctcaggcaggac
aagaggagacgcaacactgaaccaaacagctgcaaggatggctcaccagtaggacacgaa
gaaactgctagcgattccttaaaattagtccaagctcttctgaaaccaaatcgacgttta
gacaaagacaaaaaagaaaaacccaaagaggaaatcttagaaagggagcaagggtcaaga
ataggcaaaggttcagactcttgtcaaaacagaaaaagaaaacacaaaaccaagcccagc
acagattcagataggttaggcacagaagtacatcaacaccctgaaggcagcaagactcct
gagcgggacaaaaagaggaaaaagcaggataaggagataaataaccaaccgagtgatatc
cctagcaagactaaaagtaacaaatacctccaacctaaaactgcagaacagcccaacagc
cttaaacgtgaatccttgaagccttctgacagacgaacacaaagtacagagaagaaaagt
aacaatgcatcgcctctgactaaaaaagacatctgggaaggagggataaaggtgatttct
cagaagaaaataagtatcaacatcaacttggatgggaaaaggaaggacgagaagactgaa
cagaattcttctagttcgggggttagtactcaggaaagaaaagagccatctagtgataca
gaggaaaagttcaagaaagaaaatacagaaactgtagtaaacgaaaacaaagaatcaagc
cctggacttctgccacaagagaaaccatctatttggcaggagattaaagagtcaggaaac
aaagctacctccaatgttgaccataaggatgtgtctatgaaaatccctagagagaaagaa
aaggatggggagaaaaacaagaaaggggaggaggacttagatttatggcactgtgcactg
aaaggactggaagacaagaaggagagaacgacaggaaaggaagaagaggcagataaagga
aaagatggctgcagagaccagaagatggtcctaaagaaaggcagtacaagcagagaaaac
cgaggtgaagcacagaaggaagacaaagcagtgaggtcaagctcacagagaagcaaacca
aaaaacctccatgatagacagaacgacgcatcaaaacacagcagcagtgatactgaaggg
agacaggagatgaccgcagggggaaaactactggaagatctgtcaaagggccgagctaaa
gtctcacagactgaacctacacaggtacttcactccaagtgggggaaaaatgaaaaagat
gtgacaacaagagaagttaaagcgactcagcctaagccatcagagacgaggaacaacact
gaatcagtgggagacaatgaacagaagagtctcagatcagtggagagagggagagacagg
aacagggtggccgtgggaggcagagaccaggagaaggaaagaaactctgcttcatcgggg
tcatactctactgtggctccctcttgtgacagtgagagagagagggacaaagagagaaca
agggaaaacgaaagacgaagagagagtgagaggtcaaagcaaggaatgagggaagaggaa
aggagagactgggatgccccagtgtcaaagagaaatttgtcctcgtctcactcatctcat
ttgtcagtttcaaacaatacagagaacagaggactgctaagagagagtgtccagagcttt
tcaagtcacagcagaaaatcctccagatatacctatatgcctgatcaaaatgcagccaag
agacacagagatgcatccctggactttaatagtaaagacaaagaccactttgactatagt
tatcaccgtccagcagcagactacggttataaagatcgacctgcagggactcaacactca
ccacctgcttacagctactgtagggacagaggcacgcactccttcgagccaccggccggc
tctcagagaggcctaatcgactgggaattaatgcaaaacaaaaacagaactgagagcagg
gtacagaaagaagagaagccaggaaaggagaggaaaactttaggagatggcaaaagggag
agagaatattctgaggtggtgggtgggcgagaaagtgggagtcaggaggaaagggcccaa
agactagatgagcgacgtagatccagcagcagtagcagcagcagcgtccgttcatctgcc
agccgcaggagcagcagggatgaacagagagaaggtaaagaagcatactga
DBGET
integrated database retrieval system
