Girardinichthys multiradiatus (darkedged splitfin): 124863346
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Entry
124863346 CDS
T08099
Name
(RefSeq) E3 ubiquitin-protein ligase TRAF7 isoform X1
KO
K10646
E3 ubiquitin-protein ligase TRAF7 [EC:
2.3.2.27
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124863346
Enzymes [BR:
gmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124863346
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
124863346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WDR55
Beta-prop_EML
EIF3I
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
NBCH_WD40
WD40_like
Beta-prop_SPT8
Beta-prop_DCAF4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
Beta-prop_EIPR1
zf-C3HC4_4
Beta-prop_IFT140_2nd
Sina_ZnF
Beta-prop_Nup120_160
zf-C3HC4_3
zf-TRAF
WD40_MABP1-WDR62_1st
zf-RING_5
DUF1664
Filament
WDR90_beta-prop_4th
DUF16
DUF4164
Motif
Other DBs
NCBI-GeneID:
124863346
NCBI-ProteinID:
XP_047213648
LinkDB
All DBs
Position
X:complement(10452566..10470899)
Genome browser
AA seq
693 aa
AA seq
DB search
MSSSKTPRYNQYSAGAAAGASSISSSPSSPPADSGVGSMMEASFGPTFSSSGAKVSAESS
NTYKQHRRTPSTSSTLTYSPRDEDDGMPPIGTPRRSDSAISIRSLHSESNMSLRSTFSLH
EEEEDLEPQVFAEPPSVKLCCQLCCNVFKDPVITTCGHTFCRRCALTSDKCPVDTAKLTV
VVNNIAVAEQIGELFIHCKYGCRAATNGPGGAAASTASVAGKPGAYEVDPLGCPFTIKLS
SRKEHEASCDYRPVRCPNNPSCPPLLTMNLEAHLKECEHIKCPHSKYGCIFIGNQDTYET
HLEVCKFEGLKEFLQQTDDRFHEMQLALSQKDQDIAFLRSMLGKLSEKLDQLEKNLELKF
DMLDENQSKLSEDLMEFRRDASMLNDELSHINARLNMGILGSYDPQQIFKCKGTFVGHQG
PVWCLCVYSTGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGNKLYSGSA
DCTIIVWDIQTLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELT
GLNHWVRALVASQNHLYSGSYQTIKIWDIRSLECVHVLQTSGGSVYSIAVTNHHIVCGTY
ENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQ
TLLRHQGSVTALAVSRGRLFSGAVDSTVKVWTC
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagtaaaactcctcgctacaaccagtactctgcaggagcagcagctggcgca
tcatccatctcgagcagcccctcgtctccccctgctgactcgggtgtcgggagtatgatg
gaggcgtcctttggccccaccttttcatcctctggagctaaagtttcagcggagagctcc
aacacctacaagcagcacagaagaactccctccacatcaagcactctgacatactcccct
cgtgatgaggacgatggaatgcctcccatcggcactcccaggaggtctgattcagccatt
tcaattcggtctctccattccgagtccaacatgtctctgcgctccactttctctctgcat
gaagaggaggaagacttggagccgcaggtgtttgctgagccgccgtctgtaaaactgtgc
tgccagctgtgctgcaatgtcttcaaggatccggtcatcaccacatgtgggcacacattc
tgcagacgctgtgccttgacttcagataagtgccccgtagacacagcaaagctaactgtt
gttgtgaacaacattgcggtggccgagcagattggcgagctgttcattcactgtaaatac
ggctgcagagcagcaaccaacggcccaggtggagctgcagcttctacagcctcagtggct
gggaaacccggggcctacgaggtggaccccctgggctgcccgttcactatcaaactgtcc
agtcgcaaagaacatgaagcaagttgtgactacaggccggtgcggtgtcccaacaacccc
tcctgccccccgctgctcaccatgaatctggaggcccacctcaaggaatgtgagcacatc
aaatgtccacactccaaatatggctgcatattcataggaaaccaggacacgtatgaaacc
cacctggaggtgtgcaaatttgagggtctaaaggagtttctccagcagacagatgacagg
ttccatgaaatgcagctggctctgtctcagaaggatcaagatattgccttcctgcgctcc
atgttgggcaaactctctgagaagttggatcagctggaaaaaaacctggagcttaaattt
gatatgttggacgagaatcagagtaaactcagcgaggacctgatggagtttcgtagagat
gcctccatgctaaacgatgagttgtctcacatcaacgccaggctcaacatgggaatcctt
ggctcctatgacccacagcagatcttcaaatgtaaagggacattcgtcggccaccagggt
ccagtctggtgtctctgtgtgtactctactggagacctgcttttctctggctcatctgat
aagacaattaaggtgtgggacacctgcactacttataagtgtcagaaaaccctggaaggt
catgatggcattgtcctggctctgtgcattcagggaaacaagctgtacagtggatctgct
gattgcaccatcatcgtgtgggacatccagaccttgcagaaagtgaatactatccgtgcc
catgacaaccctgtgtgcacgctggtctcctcccacaacatgttgttcagcggctccctc
aaggccattaaggtgtgggacattgttgggacggagctgaagctgaagaaggagctgaca
ggactaaatcactgggtgagagccttggtggcctcccagaaccacctgtacagtggctca
tatcagaccatcaagatttgggacatccgctccctggagtgtgttcatgtcctccagacc
agcgggggcagtgtctactccatcgccgtcaccaaccaccacatcgtatgtggcacctat
gaaaacctcatccatgtgtgggacattgagtcgaaagagcaggtccgaaccttgacaggc
catgttggaacagtctacgccctggctgtcatatccaccccagaccagactaaagtgttc
agcgcctcctacgatcgctccctcagggtgtggagcatggacaacatgatctgtacccaa
accctgctcagacaccagggcagtgtaacggcactggctgtctccagggggcgcctcttc
tctggagctgtggacagcaccgtcaaggtgtggacttgctga
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