Girardinichthys multiradiatus (darkedged splitfin): 124863496
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Entry
124863496 CDS
T08099
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124863496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124863496
03012 Translation factors [BR:
gmu03012
]
124863496
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
124863496
Translation factors [BR:
gmu03012
]
Eukaryotic type
Release factors
124863496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
124863496
NCBI-ProteinID:
XP_047213840
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Position
X:894024..911545
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AA seq
561 aa
AA seq
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MDPRDTAPDSWEQEDDVEATVDGQLETAFTTLNVNAKPFVPNVNAAEFVPPFAMRSPSEN
IDAAVPVENGDTEMTAEEPWDQKDEEPTEEEPGGGDRGPGESATPEDTAPEMMEEEEEVL
VPKVPPVQPDAPKKEHINVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNR
ETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADL
AVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLVNKMDDPTVNWSLERYEECK
EKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKESTDLCPWYTGLPFIPHLDSLPNFNRSS
DGPVRLPIVDKYKDMGTVVLGKLESGSISKAQQLVMMPNRHVVEVLSLLSDDVETDDAEP
GENLKLRLKGIEEEEILPGFILCNSDSLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHT
CIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKEFPQMGRFT
LRDEGKTIAIGKVLKLVAERD
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggatccgagagacactgctcctgattcctgggaacaagaggacgatgtggaggccaca
gtcgacggacagcttgaaactgcgttcacaaccttgaatgtgaacgctaagccgtttgta
cccaatgtgaacgcagcagaatttgttccgccttttgccatgcgatcgccctcagagaac
atcgatgctgctgttcctgtagagaacggtgacacagagatgacagcagaggagccatgg
gaccagaaagatgaagagccaaccgaagaagagccgggaggcggtgaccggggaccaggg
gagtcggctacgccggaggacacagcccctgaaatgatggaggaggaggaggaagtgtta
gtgccaaaggttccacctgtacagccagatgcccccaagaaggaacacatcaacgttgtg
ttcatcggacatgtagatgctggaaagtccaccattggaggacaaatcatgtatctaacg
ggcatggtggacaagaggaccttagagaagtacgagagagaagcaaaggagaagaacaga
gaaacctggtatctgtcttgggctttggacaccaatcaggaggagagggacaaggggaag
actgtggaggtgggccgagcatactttgagacagaaaaaaagcactttactatcttagat
gctccaggccacaaaagctttgtgccgaacatgattggtggcgcatcacaagccgacctg
gctgttctggtgatctctgccaggaaaggtgagtttgaaacgggttttgagaagggtgga
cagacgcgggagcacgccatgctggctaaaacagccggagtcaagcacctgatagttctg
gtgaataagatggatgaccctactgtcaactggagtctggagaggtatgaagagtgtaaa
gagaaactagtgccatttttgaagaaagtgggcttcaacccgaagaaagacattcacttc
atgccttgttctgggctaacaggagccaacctgaaggaatccaccgacctgtgtccctgg
tatacaggtttgcccttcattccccacttggatagtctgccaaatttcaacagatcaagt
gatggtccagtcaggttgcccatcgtagacaaatacaaggacatggggaccgtggttctc
ggcaagctggagtctggctccatcagtaaagcacaacagctggtcatgatgccgaacagg
catgtggtggaggtattgagtctcctatcagatgatgtggagacagatgatgctgaacct
ggtgaaaacctcaagctgcgactgaagggcatcgaggaggaggagatcctgcctggcttt
attctgtgtaattctgacagcctttgtcattcagggcgcaccttcgacgcccagattgtc
atcattgaacacaaatctatcatctgtcctggttacaacgcggtccttcacattcacaca
tgcattgaagaagttcaaattacagccttaatctgtctagtggacaagaagacaggagaa
aagagtaagacgcggccacggtttgtcaagcaggaccaggtctgcattgctcgtttgcgc
acagcaggaaccatttgcctcgagacctttaaagagtttcctcagatgggacggtttacc
ttacgagatgaaggtaagaccatcgccatcgggaaggttctgaagctggtggctgagcgg
gactga
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