KEGG   Girardinichthys multiradiatus (darkedged splitfin): 124863760
Entry
124863760         CDS       T08099                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit-like
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
gmu  Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124863760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gmu03041]
    124863760
Spliceosome [BR:gmu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    124863760
 Complex B
    124863760
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 Transformer PAT1
Other DBs
NCBI-GeneID: 124863760
NCBI-ProteinID: XP_047214186
LinkDB
Position
Y:complement(37007666..37026384)
AA seq 485 aa
MYFLPQASQSSGILFTANKMSDFEEFEKQLSENRQERERERHKKRSRSGSPGRGDKHRSW
SKDRGSRSREKRSRSRDRKSRDRRSSSREHKKHSHSPRRTRKKKTCKYWDVPPLGFEHIT
PMQYKAMQAAGQIPTIALLATATTTGVAAAPTQVPIVGSQMTRQARRLYVGNIPFGVTEE
SMAEFFNAQMRLAGLSQAPSNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQS
LKIRRPHDYRPLPGISEQPAFHVPGVVSTVVPDSPHKLFIGGLPNYLNDDQVKELLTSFG
PLKAFNLVKDSATSLSKGYAFCEYVDISATDQAVSGLNGMQLGDKKLIVQRASVGAKNAN
PTSIIETPVTLQVPGLQRLQNSGMPTEVLCLLNMVMPEELVDDEDYEEILEDIREECCKY
GNVRSIEIPRPVDGVEVPGCGKIFVEYVSPADCQKAMQALTGRKFANRVVVTKYYDPDMY
HRHEF
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgtattttctccctcaggcgtcacaaagcagcggtattttgttcacagcaaataaaatg
tcggatttcgaggagtttgagaagcagctgagtgagaatcgacaagagagggaaagagag
aggcacaaaaagcggagtcgcagtggatctccgggccgcggcgacaagcatcgcagctgg
agcaaagacagagggagccgcagccgagagaagaggagccgcagccgtgaccggaagagc
cgggaccgccgcagctcctcccgggagcacaagaaacacagccattcaccgaggcgaaca
agaaagaaaaagacttgcaaatactgggatgttcctcctctaggctttgaacacatcaca
ccaatgcaatacaaagctatgcaagcggcaggtcagattccaacaatagctctgctggca
acagccaccaccactggagtggctgcagcgccgacacaagtgcccatagttggcagtcag
atgacaagacaagcccgacgcctgtatgttggaaatatcccgtttggtgtaacagaggag
tcaatggcagagttcttcaacgctcagatgcgtctcgcaggcctctcccaagcgccgagc
aacccggttctggcggtccagatcaatcaggataaaaactttgctttcctagagttccga
tctgttgatgagacgacgcaggccatggcctttgacgggatcattttccagggtcagtcg
ttgaagatcagacggcctcatgattatcgtcccttacctggaatctcagaacaaccggct
ttccatgttccaggtgtcgtctccacagtcgttcctgactcacctcataaactattcatc
ggaggcctgcctaattaccttaatgatgaccaggtgaaggagctcctgacgtcatttggg
ccacttaaagccttcaacctggtgaaagacagcgccacatctctttcaaaaggttacgcc
ttctgtgaatacgttgacatcagcgccactgatcaggctgtttctgggctcaacgggatg
cagctgggcgacaaaaagctcatcgtccagagggcaagtgtgggagcaaaaaatgctaat
cctacctccatcatagagaccccggtgacactccaggtgcccgggctccagaggctgcag
aactccggcatgccaacagaagtactgtgccttctcaacatggtgatgccggaggagctg
gtggacgacgaggactacgaggaaatcctggaggacatccgggaggagtgctgcaagtat
ggaaacgtccgttccatcgagattccccgacccgtggacggcgtggaggtccccggctgt
ggaaagatctttgtggagtatgtttctcctgcagactgtcagaaagccatgcaggccctc
accggccgcaagtttgctaacagagtggtggtgaccaaatactatgatccggacatgtat
cacagacacgagttttga

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