Girardinichthys multiradiatus (darkedged splitfin): 124864086
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Entry
124864086 CDS
T08099
Name
(RefSeq) probable E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04120
Ubiquitin mediated proteolysis
gmu04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124864086
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
124864086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124864086
Enzymes [BR:
gmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124864086
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124864086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
124864086
NCBI-ProteinID:
XP_047214668
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Position
Y:complement(28867939..28877994)
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AA seq
548 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDSDTSVEDGGKPKIQYGV
EFTFDADARVAITLYCQAFEEFSNGMAMYSPKDPTMVSETVHYKRGVSQQFSMPSFKIDF
SEWKEEDLNFDLDRGVFPMVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQTMDHDEHSSSDSVPP
GFEPISLLEALNGLRSVSPAIPSAPLYNEINFSGGVGGDSRQLSSPEHLSDGSLQKGKVS
KSPDSTLRSPSSPIQEEDEEKLSEMSDAQPHTLLSSSPAPTDATTTEDVAESLSPDDDDR
MPSGGDILQDCSSEHCSLTKTESDPAGNLSLPGSSDSTESLKSQSTNCSSQPLLCPTSSL
HLEDEHFN
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggggtccatcctaagtcgtagaattgctggtgttgaggacatcgatatccaggcaaac
tcggcctatcggtttcctccgaaatctgggaattacttcgcaagccatttcttcatggga
ggagagaagtttgatactccacatccagaaggatacctgtttggggaaaacatggactta
aattttcttggaaataggccagtacagtttccgtatgtgacacccgcaccccatgaacct
gtgaaaaccttgaggagtctggttaacatccggaaggactctctccgtttagtgaggtac
aaagatgactcggacacttcggtggaggacggcgggaaacccaagattcagtacggcgtg
gagtttacctttgatgctgatgccagggtcgccatcactctctactgccaggcgtttgag
gagttctccaatgggatggctatgtacagcccgaaggatccgaccatggtctctgaaacg
gtgcactacaagcggggggtgagccagcagttctccatgccgtccttcaaaatagatttc
agcgagtggaaagaggaggatctaaactttgacttggaccgaggagtgtttccaatggta
atccaagctgtggtcgatgaaggagacgattgtcttggacatgcacatgtgcttttggca
gcatttgaaagacacgttgatggcagtttctccgtcaagcctctgaagcagaagcaaatt
gtggaccgtgtgagctacctcctgcaggaaatctacgggattgagaacaaaaacaaccaa
gagaccaagccatctgatgacgagaacagcgacaacagcaacgagtgtgttgtctgtctg
tctgacctgagagacacactcatcctgccctgcagacacctgtgtctctgcaactcctgc
gcggacactttgcgctatcaggccaacaactgtcccatctgcaggctgcccttcagagcc
ttgctgcagataagagctgtgaggaagaagcctggagctctttctcccgtgtccttcagt
cctgttctggctcaaactatggatcatgatgagcactcaagttcagactcggtcccacct
ggttttgaacccatctctctgctggaggctttgaacggtctgcggtcggtgtctcccgcc
atcccttctgccccgctatataacgaaatcaacttctcagggggtgtgggaggggacagc
cgtcagttgagctctccggagcatttaagtgatggaagtcttcagaaaggcaaagtcagc
aagtcgcctgacagcaccctgagatcgccatcctctcccatccaggaggaggacgaggag
aagctgtctgagatgtcagacgcgcagccgcacacgcttctctccagcagccccgctccc
acagacgctacaaccactgaggacgtggcagaatccctttctccagatgacgacgacaga
atgccttctggaggagacatcctgcaggactgcagcagcgagcactgcagcttgaccaaa
acagaaagcgacccagcgggcaacctgtctctgcctggttcatcggactcaacagaaagt
ctaaaaagtcagagcacaaactgctccagccagcctctcctgtgtcccacaagcagcctt
catctggaagacgaacatttcaactga
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