Girardinichthys multiradiatus (darkedged splitfin): 124864236
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Entry
124864236 CDS
T08099
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase 3-alpha-like
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03440
Homologous recombination
gmu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124864236
03460 Fanconi anemia pathway
124864236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmu03032
]
124864236
03400 DNA repair and recombination proteins [BR:
gmu03400
]
124864236
Enzymes [BR:
gmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
124864236
DNA replication proteins [BR:
gmu03032
]
Eukaryotic type
DNA Topoisomerases
124864236
DNA repair and recombination proteins [BR:
gmu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
124864236
FA (Fanconi anemia) pathway
124864236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
124864236
NCBI-ProteinID:
XP_047214881
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Position
Y:complement(15767626..15791779)
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AA seq
1021 aa
AA seq
DB search
MLLAHLLGRLTLRSRLPRVRPSFFWAARSGWCSDTAKGENMIRSRGQIRRVLCVAEKNDA
AKGISEIMSTGRARRREGFSKFNKIYEYEYHLFGQNVTVTMTSVSGHLLGLEFKAPFQKW
HSCNPVLLFDAEVEKYCPDNMTQIKRTLEKEARQCQAVIIWTDCDREGENIGFEIIDVCK
AVKPNLQFFRAKFSEITPNSIQRACETLTEPNVNISDAVDVRQELDLRIGASFTRFQTLR
LQKIFPKSLANQLISYGSCQFPTLGFVVERFKAIQAFIPETFYKIKVLHEVEEDCVEFSW
KRKRLFHHTACLVLYQICMEDPMATVTSVTSKPKSKWRPLPLDTVELEKLASRKLRINAK
ETMKIAEKLYTQGFISYPRTETNIFLANLPLASLVEQQAQSPEWGTFAQRVLDQPGGPNP
RQGKNSDQAHPPIHPTKYTNTLQGNEGRVYEFIVRHFLACVSQDALGHETVVDIEIAQER
FSTSGLMIIARNYLDVYPYERWSTKLIPVYEQGSQFQPSAIEMVDGQTSPPQLLTEADLI
SLMEKHGIGTDATHADHIETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEMSKPDL
RAELEADLKLVSEGRKDKQSVLQHHIQKYKTVFIESVRKAKKLDEALSPYLGAAHEIPEA
EQQDMEIPLPVRKCPNCGQDMVLKKKREGNSKFLTCVGYPACKTALWFPDMVLEVSRDDS
ICPTCQPSPIHMVKFKFRRGSLPPMMPLEFVGCIGGCDETLRXVLFLKYLLXGGGGGSRG
PGDAAGRNGGWGGGAGDDPPPPRPPRPQPPRAPSSNPRSSLPAVPAWTPQPTPPLGGSSI
CVDPSSDAVVCNCGQDALLLTVHKDGPNQGRQFYKCNSETCNFFLWADQPSQQGAPQQSR
GPLLSAQRTPXPPRPSLGFGNISRGHDAGTAGHMGQTMCNCNDTAVKRTVQKDGPNKGRM
FHTCGKPRDQQCGFFQWADENVPPPGSFGGGFNAGGDEGKKGRKTMGEGAVTRPPAAKKH
T
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgctattagcgcacctcctcggcagattgacgcttagatccagattaccgcgggtaagg
ccgagctttttctgggcggcacggagcggctggtgctcggacacagcgaagggggaaaac
atgattcgcagccggggtcagatcagacgggtcctgtgcgtcgccgagaagaacgacgca
gccaagggcatctctgagatcatgtccaccggcagagcccggaggagggaaggattttcg
aagtttaataaaatatacgagtatgaatatcatctttttggccagaatgtgacagtgacg
atgacttcagtgtcaggccatttgctgggcctggagttcaaagcacctttccagaaatgg
cacagctgcaatcccgtgttgctgtttgatgcagaggtagagaagtattgcccagacaac
atgacacaaatcaagcggactctagagaaggaagcgaggcagtgccaggctgtgatcatc
tggactgactgtgatcgggagggagaaaacatcggctttgaaatcattgatgtttgtaaa
gcagtgaaacccaatttgcaattctttcgggcaaagttttctgagatcactcccaactca
attcaaagagcgtgtgagacgctgaccgagcccaacgttaacatcagcgatgctgtggat
gtccggcaggagctggatttacggataggtgcgtcctttactcggttccagacgcttcgc
ctgcagaagatcttccccaaatccttggctaatcagctgatctcatatggcagctgtcag
tttcccactctaggatttgtggtggagcggtttaaagccattcaggcctttatacccgag
actttctataagattaaagtgctccatgaggtggaagaggactgcgttgagttcagttgg
aagagaaaacgtctcttccaccacacagcttgcctggtgctctaccagatctgcatggag
gatcccatggcaacagtcacctcagtaacgagcaaacccaaaagcaaatggagaccgctg
cctttggacactgtggaactggagaaactggcatctaggaagctcagaataaacgccaaa
gagaccatgaagattgctgaaaagctttacactcaagggtttatcagctaccctcgcaca
gaaacaaacatatttcttgcaaaccttcccctcgcatccctggtggagcagcaggcacag
agtccagagtggggaaccttcgcccagcgggtgctggaccagcctgggggccccaaccca
cggcagggcaaaaactctgaccaggcccaccctcccatacaccccaccaagtacaccaac
acactgcagggcaacgaaggacgtgtgtatgagttcattgtccggcacttcctggcctgc
gtatcccaggatgctttggggcatgagaccgtggtggacatagaaattgctcaagaaagg
ttctccacatctggactcatgattattgccaggaattacctggatgtttacccgtacgag
aggtggagtacaaagctgataccagtgtatgagcagggctcccagttccagccctctgct
attgagatggtggatggacagaccagtccacctcagctgctcaccgaagccgacctcata
tcgctgatggagaagcacggcattggtaccgatgccacccacgcagaccatatcgagacc
attaagagtcgcatgtatgttggtttgacagcggaccagaggttcctcccaggagagctt
ggcatgggactagtggagggttacaactccatgggttacgagatgtccaaaccggacctc
cgtgctgaactggaggccgatctcaaactggtgtctgagggcaggaaggacaagcagagt
gtgctgcagcatcacatccagaaatacaaaactgtcttcatagagtctgttaggaaagca
aagaagttggatgaagccctgtcaccttacctgggtgcagctcatgagatccctgaggca
gagcagcaggacatggagatcccgctgcctgtgaggaagtgtccaaactgtggtcaggac
atggtgctgaagaagaagagggagggaaacagtaagttcctgacatgtgtgggctaccca
gcctgtaagacagcattgtggttccctgacatggtgctggaggtcagcagggacgacagt
atttgtcccacttgtcaaccaagccccattcacatggtgaagttcaagttccgcagaggc
agcctgcctcccatgatgcctctggaatttgtcggctgcattggtggctgcgacgagaca
ctccgataagtgctgttcctcaagtacctcctctgaggaggcggagggggaagcagagga
ccaggggatgctgcaggacggaatggagggtggggaggaggtgcaggagatgatcctcca
cctccaaggccccctagaccacaaccgcccagagctccaagctcaaatcctcgctcttcc
cttcctgctgttcctgcttggaccccacagccaacacctccgctgggtggcagcagtatt
tgcgtagatcccagcagtgatgcagttgtgtgcaactgtggtcaggatgctctcctcctg
actgtgcacaaagacggtcccaaccaaggtcgtcaattctacaagtgcaactccgagacc
tgcaatttctttctgtgggcagatcaaccaagtcagcagggggcgccgcagcagagcaga
gggcctctgctgtcggcacagaggaccccttagcctccaaggccctcgttagggttcgga
aacatatccagagggcatgatgccggcacagcaggacatatggggcagaccatgtgcaac
tgtaacgacaccgctgtgaaacgcacagtacagaaggacggcccgaacaagggccggatg
ttccacacctgtgggaaacctagagaccagcagtgtggcttcttccagtgggctgatgag
aacgtacctccaccaggtagtttcggtggaggatttaatgctggcggagacgaagggaag
aaggggaggaagacaatgggagagggcgctgtgaccagacctcccgccgcaaagaaacac
acctga
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