Girardinichthys multiradiatus (darkedged splitfin): 124864334
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Entry
124864334 CDS
T08099
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase delta catalytic subunit-like
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03030
DNA replication
gmu03410
Base excision repair
gmu03420
Nucleotide excision repair
gmu03430
Mismatch repair
gmu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124864334
03410 Base excision repair
124864334
03420 Nucleotide excision repair
124864334
03430 Mismatch repair
124864334
03440 Homologous recombination
124864334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmu03032
]
124864334
03400 DNA repair and recombination proteins [BR:
gmu03400
]
124864334
Enzymes [BR:
gmu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124864334
DNA replication proteins [BR:
gmu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
124864334
DNA repair and recombination proteins [BR:
gmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
124864334
MMR (mismatch excision repair)
DNA polymerase delta complex
124864334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
DNA_pol_B_exo2
divDNApol
Motif
Other DBs
NCBI-GeneID:
124864334
NCBI-ProteinID:
XP_047215047
LinkDB
All DBs
Position
Y:complement(6414822..6429847)
Genome browser
AA seq
1154 aa
AA seq
DB search
MSSLSMPLVSDLAPTGHFFRAFNGESLQIKEWRELLSEGSCGGRTRLRGMEFKRRNGAPL
MGGASQAKRGKTTDEWEDSPSQFEEELSMFDDVEIDMDDMEGQAGHDVIPVGNLFSADQN
PRWRRPNAPSLDPSSDTLVFQQIDLDYYLGGSIAGMPGQSQGKVPIIRMFGVTDSGNSVC
CHVHGFAPYFYVPAPSGFTSNYLGEFKRELNSVVLKDMRSNKDNISVTVLAVDICRKESM
YGYHGQRSLDFLRITMAMPRLIAPAKRLLEQGFTFGPFPIQSYQAYEANIDFEIRFMVDS
DVVGCCWIELPKGKYSVREEKSSVNPVSQTPSKVSLCQYEVDVGWTDFISHPAEGEWQKI
APLRVLSFDIECAGRKGIFPEPDKDPVIQIASMVLRQGETEPFIRTVFTLQSCASIVGSQ
ILCFTQEKKLLQSWAEFLRTVDPDIITGYNIQNFDFPYLLNRAAALKVDHFPYLGRMQSI
QSVLRESSFQSKQMGRRENKTINMEGRVQFDLLQVLLRDYKLRSYTLNAVSFHFLQEQKE
DVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMARVTGVPLTYLL
SRGQQIKVVSQLLRQAMKQDLVMPVVRTEGGEDYTGATVIEPEKGYYSIPIATLDFSSLY
PSIMMAHNLCYTTLLQKGSAEKLGLSPDDFIRTPTGDQFVKSSVRKGLLPEILENLLSAR
KRAKAELKKETDPFKKQVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTGFGRQM
IEKTKQLVESKYTISNGYQADAKVVYGDTDSVMVKLGVSTVKEAMDIGRKAAEWVSSHFT
PPIKLEFEKVYYPYLLINKKRYAGLYFSSSPDTHDKMDCKGIETVRRDNCPLVANLINTC
LQMILIDRDPLGAVDHAKEVISDLLCNRIDISQLVITKELTRTAQEYAGKQAHVELAERM
RKRDAGSAPNLGDRVPYVIIKAAKGAAAYMKSEDPIYVLENNIPIDTQYYLEQQLSKPLL
RIFEPILGETKAESVLLKGDHTRCKTVLTSKVGGLMAFAQKRSTCIGCKAVLKTDAAVCD
FCKKKESELYQKEIFHLNALEERFSRLWTQCQRCQGSLHEDVLCTSRDCPIFYMRKKVQK
DLDDQSKLVSRFRW
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcattgtcgatgcctttagtttcagacctagcacctactggacattttttccgc
gctttcaacggcgaaagcttacaaattaaagagtggcgggagctgttgtcagaagggtct
tgtggaggaagaacacggcttagaggtatggagttcaaacgtcgcaatggtgcccctctc
atgggtggtgcatcccaggccaagcgtggtaaaacgactgacgaatgggaggacagtccg
tcccagtttgaggaagaactgtcaatgtttgatgacgtagagatcgatatggatgacatg
gagggacaggcgggacatgatgtcattcccgtgggtaaccttttctcagcagaccagaac
cctcgctggaggaggcctaacgccccctcattggacccatcctctgataccttggtgttc
cagcaaattgatctcgactactacctgggtggctccatagctggtatgcctggccagtca
cagggaaaagtaccaatcattaggatgtttggtgtaacagacagtggcaacagtgtgtgc
tgtcatgttcacggctttgcaccttacttctatgttcctgcaccaagcggattcacatct
aattaccttggtgaatttaaaagagagctgaactctgttgttcttaaggacatgcgctcc
aataaggacaatatctctgtcacagtgctcgctgtggacatctgtcgcaaagaaagcatg
tatggctaccatgggcagcgcagtctggattttttgcggataacaatggcgatgcctcgt
ctcattgcgcctgcaaagcgcctgcttgaacagggctttacgtttggaccgtttcccatc
cagagctaccaggcctatgaagctaacatagattttgaaatcaggtttatggtggacagt
gatgtagtgggatgctgctggattgaacttcccaaaggcaagtacagcgtccgtgaagag
aagagctcagtgaacccagtttctcagaccccaagcaaggtttctttgtgtcagtatgaa
gttgatgtcggatggacagacttcataagtcaccctgcagagggagaatggcagaagatc
gctccacttagggtgcttagctttgacatagagtgtgcaggaagaaaaggaattttccct
gaaccagataaagacccagtgattcagatcgcctcgatggtcctacggcagggtgagacc
gagccgttcattcgcacagtgttcaccctccagtcctgcgccagcatcgttggctcccag
atattatgctttactcaggagaaaaagcttcttcagagctgggcagagttcttgaggacc
gtggacccagacatcatcactggatacaatatccagaactttgattttccctacctgctc
aacagagcggctgctttgaaggtggatcattttccatacttgggccgaatgcaaagcatc
caatcagttctgcgagagtcaagtttccagagtaagcagatgggacgcagggagaacaag
accatcaacatggagggccgagttcagtttgatctgctgcaggttcttctaagggattac
aagttgcgctcctatacgctgaacgccgtgagtttccattttctgcaagaacagaaggag
gatgtacaacactccatcatcactgatctgcagaatggaaatgaacaaacacggcgtcgt
ttggcagtgtactgcctgaaagacgcctacctaccgctccgtctgctgcagaaactgatg
tgcgtgattaactacatggagatggccagagtgacgggagttcctctcacttacctgctc
tcaagaggacagcagatcaaagtggtctctcagctgttgcgacaggctatgaaacaggac
ctggtaatgcctgttgtgaggaccgaggggggagaagactacacaggagcaacagtcatt
gagccagagaaaggatactacagcattcctatcgccaccctggacttttcctccttgtat
ccgtccatcatgatggctcacaacctgtgctacaccaccttgttgcagaaaggctctgct
gagaaacttgggctgtcaccagatgacttcatcaggactcctacaggtgatcagtttgtg
aagagctctgtgagaaagggtcttcttccagagatcctggagaacctgctgtctgcccga
aagagggctaaagcagagctaaagaaggaaaccgaccctttcaagaaacaggtgctggat
ggtcgtcagctagccctgaaaatcagtgcaaattctgtgtatggcttcactggggcccag
gtgggcaaactgccctgcttggagatctcacagagtgtcactggttttggaagacagatg
attgagaaaaccaaacagctggtggagtccaaatatacaatttctaacggctaccaagct
gatgccaaggtggtttatggggacacagactccgtcatggtcaaactcggtgtctccacc
gtaaaggaagccatggatattgggaggaaagcagctgaatgggtgtcatcccattttaca
ccacccatcaagttagagtttgagaaggtgtattacccatacctgctgatcaataagaag
cgctacgcaggcctgtatttctcctccagtccagacacgcatgacaagatggactgtaaa
ggcatcgagacagtccgcagagacaactgtcctctagtggccaatcttatcaacacttgt
ctacaaatgatcctcattgacagggatcctctaggtgctgtggatcatgcaaaggaagtg
atctcagacctgctgtgcaatcgcattgacatcagtcagctggtcatcactaaagagttg
acgcgtacagcccaggagtacgctggcaagcaggcacacgtggagctggcggaaaggatg
aggaaaagagatgcaggtagtgccccaaacctgggtgacagagttccctacgttatcatc
aaggctgcaaagggagcagcagcttacatgaagtcagaggacccgatctatgtgctggag
aacaatatccccatcgacacacaatactacctggagcagcagctgtccaaacccctactg
agaatatttgagcctatcctgggggagaccaaggcggagagtgtccttctaaagggcgac
cacactcgctgtaagaccgtgttgacctcgaaggttggaggcctcatggcattcgcccag
aagagaagcacctgcattggctgcaaagctgtgctcaagactgatgcggctgtgtgtgat
ttctgcaaaaagaaggagtctgaactttatcaaaaagagatcttccacctgaacgcgttg
gaggagcgtttctcccgtctgtggactcagtgccagcgctgccagggttcgctgcatgaa
gatgtgctctgcaccagccgcgattgcccaatcttctacatgaggaagaaggttcagaag
gatctggatgaccagagcaagctagtgtctcgattcagatggtga
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integrated database retrieval system
