Girardinichthys multiradiatus (darkedged splitfin): 124864364
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Entry
124864364 CDS
T08099
Name
(RefSeq) protein CASC3-like
KO
K14323
protein CASC3
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03013
Nucleocytoplasmic transport
gmu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124864364
03015 mRNA surveillance pathway
124864364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124864364
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124864364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
124864364
NCBI-ProteinID:
XP_047215086
LinkDB
All DBs
Position
Y:40236330..40247084
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AA seq
752 aa
AA seq
DB search
MADRRRRRRRASQDSEDDDESGSGSDSGRSGSPATKARGREPDPAEPTVSRSEAKSDVES
ECESEDGAGEAVLSDYESADPEENGSRSEGGEEEEEAFSEEEAPAAAASEPKPSAADGPT
QDDREEEKAEEEVGECSKEESKAEEKGNLAGERQSGDGQESTDDPETKAEGKPGQQLDDD
EDRKNPAYIPRKGLFFEHDVRGQTQEEERPKGRNRKLWKDEGRWEHDRFREEEQAPKSRE
ELIAIYGYDIRNGGGIDSGERAYRQRRPRQSSPSSRDKRWRDGQRPARSWQNRGAGAPPP
SSVPPPSSSGFPSLSAAQQSNNSSRPPPSRSRPPYHNQTHPSAQSVYRNNESNAPQVHPR
ERHSSKVQLDTRERGGSSRGGRGHGGRGGSSVVIEEVSVSQSGAAEDDPRSATAATVQPG
GYQSPRRQEQRGSADRAASGSAASTSDPALQSSAANPEASPPTERPVERKSYSLARRTRS
RPSDLGSKQASVEESAAGPTNSSPSSGGGKNWAEGGDGASQTGGGGVADLDQEVARLNLA
RQNWSQSPTSYLRSEMRGLPNPIHMASGPPQYSNMEELGVGSNRAKRYSSQRQRAVPEPA
PPMHLGVMEGHYFEPMSYQGPIYTHGEGPAPIPPQGMLVQPEMHIPHPGLHPHQSGGPIA
NPTLYGAPPVSLSPGQPQQLLPPPFYPPPGVMTFPYPAMYPSPQGQTQVTYGGVTYYDTM
QQQAQPKPSPPRRTSQPVTVKPPPPEVPFASE
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcgacggaggaggaggcgcgcgtctcaggacagcgaggacgacgatgag
tccggctcgggttcggatagcggaaggtccggttctccagctacaaaagcacgaggccga
gaacccgacccggctgagccgacagtgagccggtccgaggcgaagagcgacgttgagtcc
gagtgtgagagtgaagatggagcaggagaagctgtcctctcagattatgaaagtgcagat
ccagaggaaaatggttcccgctccgagggaggggaggaggaagaagaggctttcagtgaa
gaagaggctccagcagcagcagccagcgaacccaaaccgtctgctgctgacggtccgacc
caggatgacagagaggaggagaaggcagaggaggaggtgggagagtgcagtaaggaggag
agcaaggcggaggagaaaggcaacctggcaggagagagacagagcggagacggacaggag
tccaccgatgatccagagacgaaggcggaaggaaaaccaggtcagcagctggatgatgac
gaggaccggaagaacccggcttacattcccaggaagggtctgttctttgagcatgatgtc
cgagggcagactcaagaagaggagaggcctaaaggtcggaacaggaagctgtggaaggac
gaaggccgctgggaacacgacaggttcagagaggaggagcaggcgccaaagagccgcgag
gagctcatcgcaatctatggttacgacatccgaaacggcggtggcatcgactctggagag
cgggcctacagacagcgcagacccaggcagagttctccttccagcagagacaaaaggtgg
agagacgggcagagaccggcccgatcctggcagaaccgaggagcaggagctcctccacct
tcatctgtccctccaccctcttcctcaggctttccttccctctctgctgcgcagcaaagc
aacaactcctccagaccacccccctctcgcagcagacccccctaccacaaccaaacgcac
ccatcagctcagtccgtgtacaggaacaatgaatccaacgcacctcaggttcatcccaga
gagcggcacagttcaaaggttcagctggacacaagagagagaggagggtccagcagggga
gggcggggccacggaggaagaggcggctcctctgtggtcattgaggaggtttcagtcagc
caatcaggcgcagcggaagacgatccgaggtcagcgactgctgcaacagtgcagccgggc
gggtatcagtcaccaagacggcaggaacagagaggcagcgctgatagagctgcctctggt
tcggctgcctccacctctgaccccgccctccagtcttcagcagccaatccggaagcttct
cctcccactgagcgcccagttgaacggaaatcgtactctctggctcgcaggactcgctca
cggccctcggacctgggcagtaaacaggcctcagtggaggaatctgcagccgggccgacc
aactcctcacccagcagtgggggagggaagaactgggcggaagggggcgatggggccagt
cagacaggagggggaggggtggccgacctggaccaggaagtggctcggctgaatctggcc
cgacagaactggagtcaaagtccaacgtcgtatttacgctcagagatgagaggccttcct
aacccgatccacatggccagtggtccgcctcagtactccaacatggaggagttgggcgtc
ggctccaaccgggccaaacgctactcctcccagcgccagcgagctgtgccagaaccagct
ccgcccatgcacctgggagtgatggagggacactactttgagcccatgtcgtaccaggga
ccaatctacacccacggggaaggccccgcccccatacccccgcagggcatgctggtccag
ccagagatgcacatccctcatcctggtctccatcctcaccaatcaggaggccccattgct
aaccccaccctgtatggagctccacctgtctctctgtcaccggggcaaccacagcagctg
ctgcctccacctttctatcctcccccaggggtcatgaccttcccgtaccctgccatgtac
ccaagcccacagggccagacccaggtgacctacggtggcgtcacgtactacgacacgatg
cagcagcaggctcagcccaaaccatcacctccccgccgcacatcccagcccgtcaccgtc
aaacccccccctccagaggttccttttgcctcagagtga
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