Girardinichthys multiradiatus (darkedged splitfin): 124864479
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Entry
124864479 CDS
T08099
Name
(RefSeq) nuclear pore complex protein Nup85-like isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124864479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124864479
03036 Chromosome and associated proteins [BR:
gmu03036
]
124864479
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124864479
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124864479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
DUF570
Motif
Other DBs
NCBI-GeneID:
124864479
NCBI-ProteinID:
XP_047215229
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Position
Y:20395898..20406058
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AA seq
654 aa
AA seq
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MEEVDVEPTVTNIPGIRYGKHMGFAWGPGDILVYETQFKASGPSLSGPADPFIHQVRKDE
DIYSPILRKLFNESHHIFVGLQTIKEDLPSKSKRTQFVSISRNYRSVIRACMEELQQVAV
STRDTEMATQYGNQVSILLAIELIWNLCEVLYIDAAPAGSLLLHLLDWVRLHKADVDEKA
RDVLQSDSPAEHHNYWDVVVSYVLQGSLVEARQMLVKQVTLQPASRNMYKLMDSLLGKMP
FFSPGGTETVTEFDVKWSNWHKEVESYLKDNSFASNHHLELICKILVGDEDTLLEQKELL
STWYHFLVTRLLYCHPTVKPFELHYYAQSCLTMFLDLRSVQEPLDSILLAAFEYDICLVI
KDCSIVLNNWWFVAHLTDLLDHCKLLHSHNLNFGSNMREFLLLEYASGLFTHHSLWQCAV
DYFDQCPELGRACLELQIERVPLDNERKALKVLRICEERQMSEQVRSICKIMAMRALRNN
RLGSALSWSIRAKDAAFATLISERFLQDYCAKGTFSDLDLIDNLGPAMLLSDRLTFLGKY
REFHKLYGEKRFKGAAKLLLSLMTAKIAPQSFWMTLLTDALPLLEQTEVIFSADQTNELM
YCLEELTSSLNSTAPGADRPMQQEDVEQTKVELLRLSLARNLAMAVVKEGTMET
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagtagacgttgagccgacagtcactaatataccaggaatcagatatgggaag
catatgggatttgcctggggtcctggagatatccttgtatatgagacgcaatttaaggca
tcaggtccttcgctgtcaggcccagctgaccccttcatccaccaggtcaggaaggatgag
gacatatactccccaattttacgcaaactgttcaatgagtcgcatcacatctttgttggg
ctgcagacaatcaaagaggacctccccagcaagagcaaaagaactcaatttgtcagcatc
agcagaaactacagatctgtaattcgggcttgcatggaagagcttcaacaagttgcagtt
tctacaagagatacagagatggccacacaatatggaaatcaggtttctattcttttggcc
atagaactgatctggaatctgtgtgaagtgctttatatcgatgctgctcctgctggctct
ctgttgcttcatcttctggactgggtgaggttacacaaggctgatgttgatgagaaggcc
agggatgtgctgcagagtgacagccctgcagagcaccacaattactgggatgtggtggtg
agttatgttctgcagggcagtttggtagaagccagacagatgctggtgaaacaggtcacc
ctacagccagcctccaggaacatgtacaaactaatggatagcttactcggcaaaatgccc
tttttcagtcctggtggcactgagacagtgacagagtttgatgtgaagtggagtaactgg
cataaggaggtggagagctacctgaaggacaactcatttgcaagcaaccaccacctagag
ctcatctgtaagatcctcgtgggcgatgaagacactctgctggagcagaaggagctgctt
agcacctggtatcactttcttgtcacaagactgctctactgccaccctacagtgaaaccc
tttgagttacattactatgcacagtcatgcctgacgatgttcctggacttgaggagtgtc
caggagcctttagacagcatcttactggctgcctttgagtatgacatttgtctggtcatc
aaggactgcagcattgttctcaacaactggtggttcgtggctcatttgacagacctgctg
gatcactgcaaactcctccactctcataatctaaactttgggtccaacatgagagagttc
ctcctgttagagtatgcctctggtttattcactcatcacagtctgtggcagtgtgctgtg
gattacttcgaccaatgtccagagttgggccgagcttgcctggagctgcagatcgagcgt
gtgcccttagataatgaacggaaagcgctcaaagtgctccggatctgtgaggagaggcag
atgtcagagcaggtgcggagtatctgtaagatcatggctatgagagctctgaggaacaac
agactgggctcagctctgtcctggagcatcagggccaaagacgctgcctttgccaccctc
atctctgagaggttcttacaggattactgtgccaaagggactttttctgacttggatctg
attgacaatttgggtccagcaatgctacttagtgacaggctcactttcctcggaaaatac
agggagttccacaaactgtatggggagaaacgtttcaagggggctgcaaagctgctgctc
tccctcatgacagcaaagattgctccacaaagtttctggatgactctgctgaccgacgct
ctgccactgctggaacagacggaggtgatcttctcggcagaccaaaccaatgagttgatg
tactgtttagaggagctgacgtcctcactgaacagcacagctcctggtgcagacagacca
atgcagcaggaagacgtcgagcagacaaaagtggagctcctgaggctctctctggccagg
aatctggcaatggctgtcgtcaaagaaggaactatggaaacatga
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