Girardinichthys multiradiatus (darkedged splitfin): 124864870
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Entry
124864870 CDS
T08099
Name
(RefSeq) MHC class II transactivator-like
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gmu01001
]
124864870
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gmu04054
]
124864870
Enzymes [BR:
gmu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
124864870
Protein kinases [BR:
gmu01001
]
Serine/threonine kinases: Other
TAF1 family
124864870
Pattern recognition receptors [BR:
gmu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
124864870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
LRR_14
nSTAND3
NLRC4_HD2
AAA_22
AAA_16
nSTAND_NTPase5
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
124864870
NCBI-ProteinID:
XP_047215787
LinkDB
All DBs
Position
Y:9137556..9168468
Genome browser
AA seq
1662 aa
AA seq
DB search
MTPFAEVLDQVRLVLTWAFPGEVQALLKGLVKEGIISEIYRKSLNLHWLNDGIVTTLTSK
PGCSKLDVDFNSQGSVAQWYLDQDPMTQMSTSVSKLLASDHNVEQTELASSIEEPNSTRI
NLQNLSHEYELLQRNQEEIKELLEEFVMDVSYSNEELFSSPSGFDCTFRSSDEKGQLLSS
ASSESASDNERVSTGNLENEEEWLEQVEEAARRIAVPLWQHWDRGRGMLQTLLLCLPSTL
VNDGMVSEVEAQCATFDTEEKMELAAACRTPDACVGDFECAEPSLTCDTAAGRSERGELH
FSTNNRIAVLNMEDFRIHRAARSASPVEACKATDASYITEMLESKFEIFWPPDKMADVED
DLFCLTANTLCKQCGTNSGLSESTFRHLLYSGAPEDRRTVLQENSHYSLTERKTDYLQDV
FRNTAVSCIDRFRELHEKTDSHGDAKMQEFDQDSLSLSDLLPDEDISNFLDDDYLVSHLD
PTLLLNFEEQGTVGLDFVDEIINSDPPVALEANHKEQKEQSQPTDKIKPKRKRQRDALSK
QCTDGNLRVKRQKAIDSPKTKEETVEPTVTHGADAETMPVPTEPMRGPSTTPPGIVHVFP
SQSSNPIPIQLITIPDSPAYKVVQLSSSPSPLIRLPLPNTSAMPTYIFIPAPSPTCKRQV
PPLSPVDGAVAPVLMSSFQPISMSDTASKAMSSPAAASSSPTNKISPCKEAPKSPPEVEI
PQGVKDYIQQSKTHMSQACQHMEGGLRLSAHYVDVNVSQREMARSGKNTNRCLDKELIIT
GDIDRQKRSVGQSQIFDSLDGKRCSLLLGNAGMGKTTLIKKLCLDWSKDCIPQFDFVFLL
DGKQLTLTEPVHSLQTLLLSRSSFAPPCMDPEGVYAQILAAPKRVLVVFDGFDELRNYEM
LLQTQEKDLVASLQKDSKAQAFTVKQLFSGILQRVLLPGCMLLLAIRPRGTASQLLRRTD
SFLEVCGFTSANVETYVSQYFSDPELRASALDYLKICNYLHLLCWNPGLCHLVCNVLQQC
KSSDALPRTLTTLCHKVLCLKMEKDRGSPESLVEPKSQKTVEPIEETEISNNSQGRRGHK
NNRTRARAVPRISSRSQRARRMKGQEKLEEENACEDTNRTESRELLSQLCSLAWEGVKSN
SSVVPRERTISTKLRAFSLKAGLLLSQSLMKRTPAKLEDSEGGGREVNNGTVGVEEKESK
QKGGNAETFDECEDNILLWANPFLQSYMAAVHLSLSRTVTDRSFLQTLPFQTGAKGRRKS
QREELELTQRFALGLLFHNRTELQMLHTYSDTVFRDMVASKQALVMKHLEGLSFGDLSSA
QILEMCNYVYEASFTHKENGRNTGGKMLALLAVHIPEFLSFRGVPLSPPDVFTVQNALSR
GGAEGRSFCLDLEDSGIHICGLKALVGLSNINTYRACIADVLTLWKELEKLGDEGLLQGA
VSKFKIHPLKATQVCHIEHLESLVSIHTHKRLSSSSSQSGSILADGVPAVKELYKLEFEL
GQENGPLALPKLWDLLPGLHNLQHLDVENSKIGDKGAEKLANALVFLRSLEILNLSENCV
GDQGVKKLALALKDLPKLHCLSLYSNVISDEGAESLAAVLPHMASLTDLDVKYNKMTDVG
AQSLGASLRNCKKVKTLRMWNQCIPYGVFERLQQQDSRILWH
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgtttgccgaggttctggaccaggtgagattggttctcacctgggcatttcca
ggtgaggtccaggctctgttgaagggtctggtgaaggaagggatcatctcagagatttac
aggaagagtttgaatttgcactggctgaatgatgggatcgtaactacgttaaccagtaaa
ccaggatgtagcaagctggatgtggactttaattctcagggatcagtggcccagtggtac
ctcgaccaagacccgatgacccaaatgagtacaagcgtatcaaaattgcttgctagtgac
cacaatgtggaacaaactgaattagcctcatcaatagaggaacctaacagcacaaggatt
aacctgcagaacctctcccacgaatatgaacttcttcagagaaaccaggaggaaattaag
gaattattggaagaatttgtaatggatgtgtcctactcgaatgaagagctcttttcctca
ccatcagggtttgactgcaccttcagatccagtgatgaaaaaggacaactgctgagcagt
gcaagtagtgagtctgcaagtgataatgaaagagttagtacggggaatttggaaaatgag
gaggagtggttagagcaggtggaagaagcagcaaggagaatagccgtccctctgtggcag
cactgggacagaggacgagggatgttgcagaccttgcttctctgtctgccaagcacttta
gtaaatgatgggatggtgtcagaagttgaagcccagtgcgctacttttgacacggaagag
aaaatggagcttgcagccgcttgtaggacgcctgacgcctgtgttggtgactttgagtgc
gcagagccaagcctcacatgtgataccgctgcaggcaggtcagaacgaggagagcttcac
ttctctacaaacaacagaattgctgtgttgaacatggaagatttcagaatccacagagca
gcacgaagtgcctcacctgttgaagcctgcaaagcaacagatgcgagctacatcactgaa
atgctggagagcaagttcgaaattttctggccacccgacaagatggcagatgtagaagat
gacctattctgtttgacagcaaacacattatgcaaacaatgtggaacaaactcaggactc
tcagaaagcacttttaggcacctcctctactcaggtgcacctgaagacaggagaactgtt
ctgcaagaaaactctcattatagtctgacggaaagaaaaactgattatctgcaagatgtt
ttcaggaatacagcagtgtcttgtatagaccgattcagagagctccatgagaaaacggat
tcacacggtgatgccaagatgcaggaatttgaccaggactccttgagcctgtcggacctc
ctgcctgatgaagacatatcaaactttttggatgatgattacctagtttctcacctggat
ccgaccttgctcctcaactttgaggagcaaggaacagttgggcttgacttcgtggatgaa
atcatcaacagtgatcctccggtggcactggaggctaaccacaaagagcagaaagagcag
agccagccaacagacaaaataaaacctaaaagaaaaagacagagagatgccctctctaaa
cagtgcaccgatggaaacttgagagtgaaaaggcaaaaagcaatagattcaccaaaaacc
aaagaggaaactgttgagccaactgtcacccacggtgcagatgctgaaacaatgccagtt
ccaacagagccaatgagaggcccctccaccactccgccaggaatcgtccacgtgtttcct
tcccaatcatccaatcccattcccattcagttgatcacaattccagactcccctgcttat
aaggtggtccagctgtcctcctctccttctccacttattagacttcctctccccaacaca
tctgctatgcctacgtacatctttattcctgctccctctccgacctgcaaacgtcaagtt
ccaccgctctctccagtggatggcgcagtggcgcccgttctgatgagttcatttcagcca
atttccatgtcagacacagccagcaaagccatgtcttcccctgctgcagcatcttcatcc
cccacgaacaagatatccccatgtaaggaggcgcctaagtctcctccagaagtcgaaatc
ccccagggcgtgaaggactacatccagcagtccaaaacacacatgagtcaagcttgccag
catatggagggaggcctgaggctgtccgcccattacgtggacgtgaatgtgagccagaga
gagatggctcgctctgggaaaaacacaaacagatgtctggacaaggagctcatcataact
ggagatatagaccgtcaaaagagatcagtgggacagagtcagatctttgacagcctggat
ggtaaacgctgcagtttgctgcttggcaatgccggcatggggaaaacaactctgatcaag
aagctgtgtctcgactggtccaaagactgcatacctcagtttgactttgtctttttattg
gatggcaaacagctcactttaacagaacctgtccacagcctccagacactgctgctcagc
cggtcctccttcgctcccccctgcatggaccctgaaggagtgtacgctcagatcctcgca
gctcctaaacgtgttcttgttgtttttgatgggtttgacgagctgcggaactatgaaatg
ctgcttcagactcaggagaaggacttggtagcctcactgcaaaaagacagcaaggctcag
gcatttacagtaaagcagctgttctcagggattcttcagagggttctgcttccaggctgc
atgctcctcctcgccatccgcccaagaggcaccgccagccagttgctccgccgcacagat
agctttctggaagtctgcggatttacttcagcaaatgtggagacgtatgtgtcccaatac
ttctctgatcctgaacttagagcatctgctttggactatctaaaaatctgcaactacctg
catctcctttgctggaaccccggactctgtcacttagtttgcaacgttttacaacagtgc
aaaagttcagatgccttaccaagaactttaaccaccctctgtcataaagtgctctgtttg
aaaatggaaaaagacagaggaagcccagagtcacttgttgagcccaagagccaaaaaact
gttgaaccgatagaagaaacagaaatctcaaacaattctcagggaaggagaggacacaaa
aataatcgaacaagggccagagcagtaccacgcatttcttctcgcagccaaagagcaagg
aggatgaaaggacaggagaaactggaagaggagaatgcttgcgaggacacaaacaggaca
gagagcagagagttgctgtcccagctttgctctttagcctgggaaggggtcaaatctaac
tcatctgttgttcccagagaacgaactatttccaccaaactgagagcgttcagcttgaag
gcaggcctgctactgtctcagtcactcatgaaaaggacacctgccaaattagaggacagt
gaaggaggaggacgagaagttaacaatgggacggtaggagtagaggagaaagagagcaaa
caaaaaggaggaaatgcagaaacctttgatgagtgtgaagacaacattctgttgtgggcc
aaccctttccttcaaagttatatggctgctgtccatttgtcgttgtcaaggactgtgaca
gaccgctcctttctccagaccttgcctttccagacgggtgcaaaaggccggcggaaatct
cagagggaggagctggagctcacacagcggttcgcattgggcctcttgttccacaacagg
acggagctacagatgcttcatacatactcagacactgtctttagggacatggttgccagc
aagcaggctttggtgatgaaacacctagaaggtctgtccttcggggacctgagttcagct
cagatcttggagatgtgcaactatgtctatgaagcaagtttcacacacaaagagaatgga
cggaacaccggtggcaaaatgctggcccttctggcggtacatattcctgaatttttatca
ttccggggtgttcctctcagccctccggatgtgttcacagtacagaacgctctcagtagg
ggtggagctgagggcagaagtttctgtttggatcttgaagactctgggatacacatctgt
ggacttaaagctttggtgggcctcagcaacatcaatacctacagggcctgcatagcagat
gtcctcaccctgtggaaggaactggagaagctgggcgacgaaggtctcctacaaggagca
gtgtctaagttcaagatccatcctctgaaagctacacaggtttgtcacatagagcacctg
gaaagtcttgtcagcatacacacccacaagaggctctcatccagctccagccaatcaggt
tccatcctggcagacggagtgccagctgtcaaagagctatataagctggaatttgagctt
ggccaagaaaacggtcccttggctcttcccaagctgtgggaccttttgcctggtctacat
aaccttcagcacttggatgtggaaaacagtaagattggagacaaaggagcagagaaactg
gcaaatgcattagtctttcttcgctctctggagatactaaatttgtccgagaactgcgta
ggagaccaaggagtgaagaaactagccctcgccttgaaggacctgcccaaactgcactgt
ttaagtctgtacagtaatgtgatttccgacgaaggggcagagagtttagcagctgtcctc
ccacacatggcttctctcacagacctcgacgttaaatataacaagatgacagatgttgga
gcacaaagcttgggagcgagtttgagaaactgcaaaaaagttaaaactttaaggatgtgg
aaccaatgcattccatatggagtttttgagagacttcagcagcaggacagccgcatcctc
tggcattaa
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integrated database retrieval system
